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The map label for this gene is yhaM [C]

Identifier: 29347490

GI number: 29347490

Start: 2606243

End: 2607532

Strand: Reverse

Name: yhaM [C]

Synonym: BT_2080

Alternate gene names: 29347490

Gene position: 2607532-2606243 (Counterclockwise)

Preceding gene: 29347493

Following gene: 29347488

Centisome position: 41.65

GC content: 46.51

Gene sequence:

>1290_bases
ATGATTGAATCGGAAAGAAAACAGATAATAGACTTGATCAAAAAAGAGGTGATTCCGGCGATAGGGTGTACGGAACCCAT
TGCGGTAGCGCTTTGTGTAGCTAAAGCTGCCGAAACATTAGGAATGAAACCGGAAAAGATTGAAGTGTTATTGAGTGCCA
ATATATTAAAGAATGCAATGGGAGTCGGTATCCCCGGCACAGATATGGTCGGACTTCCTATAGCTGTAGCCTTGGGAGCG
TTGATCGGCCGATCGGAATATCAATTGGAAGTGTTGAGAGACTGCACACCGGAGGCAGTAGAACAAGGCAAACTGTTTAT
CGCAGAGAAGCGAATCTGTATTTCTCTCAAAGAAGATATTACGGAAAAACTGTACATCGAAGTAATCTGCACAGCCGGCA
GCCAAAAAGCGACGGCTGTGATTGCCGGCGGACATACTACCTTTGTCTATATAGCTACGGATGAAAAAGTACTGCTTGAC
AAGCAACAGACTGCCAATGAAGAGGAAGAAGACGCTTCACTGGAACTGAATCTGCGCAAAGTCTATGATTTTGCCCTGAC
ATCCCCTCTGGATGAAATCCGTTTTATTCTCGATACGGCACGTCTGAACAAAGCAGCCGCCGAGCAAGCCTTTAAAGGCA
ATTATGGGCATTCTTTAGGTAAGATGCTCCGTGGAACGTATGAACATAAAGTGATGGGTGACAGCGTATTCTCTCATATA
CTATCTTATACTTCCGCCGCTTGCGACGCCAGAATGGCCGGTGCAATGATTCCCGTCATGAGTAACTCCGGCAGTGGCAA
TCAGGGCATATCCGCCACACTTCCCGTTGTCGTATTTGCCGAAGAAAATGGTAAAACCGAAGAGGAACTGATCCGCGCCT
TAATGCTGAGTCATCTCACTGTAATCTATATTAAACAAAGTTTGGGACGTCTCTCTGCCTTGTGTGGCTGTGTAGTAGCT
GCCACGGGTTCCAGTTGCGGAATCACCTGGCTGATGGGTGGAAACTATAATCAGGTAGCCTTTGCCGTTCAAAACATGAT
TGCCAACCTGACGGGAATGATTTGCGACGGTGCAAAACCGAGCTGCGCACTCAAAGTAACAACCGGAGTCTCAACAGCCG
TATTATCTGCTATGATGGCAATGGAGGACCGTTGTGTGACTTCTGTAGAAGGCATTATTGACGAAGATGTCGATCAAAGC
ATTCGTAACTTGACAAGAATCGGCTCGCAGGCCATGAACGAAACGGATAAGATGGTGCTTGATATCATGACGCACAAAGG
AGGATGTTAA

Upstream 100 bases:

>100_bases
TTGGAAGATTTTATAACAATCTGCAATTTTATTTGTTCACTAATGGATGTTTGATAAAAAAGAATTTTCTACTTTTGTGG
AAACTAAAGCCTTATAGGGT

Downstream 100 bases:

>100_bases
CAGGTAATAAGTAACAAGTAATAAGTAATAGGTAATAGCTGGAATAACGGCATAAAAAAAGTATTAAGTATTAACTTCCG
CCTATATCCGCATGGAATTA

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MIESERKQIIDLIKKEVIPAIGCTEPIAVALCVAKAAETLGMKPEKIEVLLSANILKNAMGVGIPGTDMVGLPIAVALGA
LIGRSEYQLEVLRDCTPEAVEQGKLFIAEKRICISLKEDITEKLYIEVICTAGSQKATAVIAGGHTTFVYIATDEKVLLD
KQQTANEEEEDASLELNLRKVYDFALTSPLDEIRFILDTARLNKAAAEQAFKGNYGHSLGKMLRGTYEHKVMGDSVFSHI
LSYTSAACDARMAGAMIPVMSNSGSGNQGISATLPVVVFAEENGKTEEELIRALMLSHLTVIYIKQSLGRLSALCGCVVA
ATGSSCGITWLMGGNYNQVAFAVQNMIANLTGMICDGAKPSCALKVTTGVSTAVLSAMMAMEDRCVTSVEGIIDEDVDQS
IRNLTRIGSQAMNETDKMVLDIMTHKGGC

Sequences:

>Translated_429_residues
MIESERKQIIDLIKKEVIPAIGCTEPIAVALCVAKAAETLGMKPEKIEVLLSANILKNAMGVGIPGTDMVGLPIAVALGA
LIGRSEYQLEVLRDCTPEAVEQGKLFIAEKRICISLKEDITEKLYIEVICTAGSQKATAVIAGGHTTFVYIATDEKVLLD
KQQTANEEEEDASLELNLRKVYDFALTSPLDEIRFILDTARLNKAAAEQAFKGNYGHSLGKMLRGTYEHKVMGDSVFSHI
LSYTSAACDARMAGAMIPVMSNSGSGNQGISATLPVVVFAEENGKTEEELIRALMLSHLTVIYIKQSLGRLSALCGCVVA
ATGSSCGITWLMGGNYNQVAFAVQNMIANLTGMICDGAKPSCALKVTTGVSTAVLSAMMAMEDRCVTSVEGIIDEDVDQS
IRNLTRIGSQAMNETDKMVLDIMTHKGGC
>Mature_429_residues
MIESERKQIIDLIKKEVIPAIGCTEPIAVALCVAKAAETLGMKPEKIEVLLSANILKNAMGVGIPGTDMVGLPIAVALGA
LIGRSEYQLEVLRDCTPEAVEQGKLFIAEKRICISLKEDITEKLYIEVICTAGSQKATAVIAGGHTTFVYIATDEKVLLD
KQQTANEEEEDASLELNLRKVYDFALTSPLDEIRFILDTARLNKAAAEQAFKGNYGHSLGKMLRGTYEHKVMGDSVFSHI
LSYTSAACDARMAGAMIPVMSNSGSGNQGISATLPVVVFAEENGKTEEELIRALMLSHLTVIYIKQSLGRLSALCGCVVA
ATGSSCGITWLMGGNYNQVAFAVQNMIANLTGMICDGAKPSCALKVTTGVSTAVLSAMMAMEDRCVTSVEGIIDEDVDQS
IRNLTRIGSQAMNETDKMVLDIMTHKGGC

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=424, Percent_Identity=44.1037735849057, Blast_Score=338, Evalue=3e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2080_BACTN (Q8A606)

Other databases:

- EMBL:   AE015928
- RefSeq:   NP_810993.1
- GeneID:   1072599
- GenomeReviews:   AE015928_GR
- KEGG:   bth:BT_2080
- NMPDR:   fig|226186.1.peg.2080
- HOGENOM:   HBG296671
- OMA:   PVMSNSG
- PhylomeDB:   Q8A606
- ProtClustDB:   CLSK823011
- BioCyc:   BTHE226186:BT_2080-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 45915; Mature: 45915

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00022 EGF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESERKQIIDLIKKEVIPAIGCTEPIAVALCVAKAAETLGMKPEKIEVLLSANILKNAM
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHH
GVGIPGTDMVGLPIAVALGALIGRSEYQLEVLRDCTPEAVEQGKLFIAEKRICISLKEDI
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCEEEECCHHEEEHHHHH
TEKLYIEVICTAGSQKATAVIAGGHTTFVYIATDEKVLLDKQQTANEEEEDASLELNLRK
HHHEEEEEEEECCCCCCEEEEECCCEEEEEEECCCEEEECCHHCCCCCCCCCCEEEEHHH
VYDFALTSPLDEIRFILDTARLNKAAAEQAFKGNYGHSLGKMLRGTYEHKVMGDSVFSHI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
LSYTSAACDARMAGAMIPVMSNSGSGNQGISATLPVVVFAEENGKTEEELIRALMLSHLT
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHH
VIYIKQSLGRLSALCGCVVAATGSSCGITWLMGGNYNQVAFAVQNMIANLTGMICDGAKP
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCC
SCALKVTTGVSTAVLSAMMAMEDRCVTSVEGIIDEDVDQSIRNLTRIGSQAMNETDKMVL
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
DIMTHKGGC
HHHHCCCCC
>Mature Secondary Structure
MIESERKQIIDLIKKEVIPAIGCTEPIAVALCVAKAAETLGMKPEKIEVLLSANILKNAM
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHH
GVGIPGTDMVGLPIAVALGALIGRSEYQLEVLRDCTPEAVEQGKLFIAEKRICISLKEDI
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCEEEECCHHEEEHHHHH
TEKLYIEVICTAGSQKATAVIAGGHTTFVYIATDEKVLLDKQQTANEEEEDASLELNLRK
HHHEEEEEEEECCCCCCEEEEECCCEEEEEEECCCEEEECCHHCCCCCCCCCCEEEEHHH
VYDFALTSPLDEIRFILDTARLNKAAAEQAFKGNYGHSLGKMLRGTYEHKVMGDSVFSHI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
LSYTSAACDARMAGAMIPVMSNSGSGNQGISATLPVVVFAEENGKTEEELIRALMLSHLT
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHH
VIYIKQSLGRLSALCGCVVAATGSSCGITWLMGGNYNQVAFAVQNMIANLTGMICDGAKP
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCC
SCALKVTTGVSTAVLSAMMAMEDRCVTSVEGIIDEDVDQSIRNLTRIGSQAMNETDKMVL
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
DIMTHKGGC
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12663928