Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347493

Identifier: 29347493

GI number: 29347493

Start: 2609643

End: 2610206

Strand: Reverse

Name: 29347493

Synonym: BT_2083

Alternate gene names: NA

Gene position: 2610206-2609643 (Counterclockwise)

Preceding gene: 29347496

Following gene: 29347490

Centisome position: 41.69

GC content: 45.04

Gene sequence:

>564_bases
ATGAAAAAGAATCTATTGTATTTGTGGGCATTGATATGCTCTGTCTCTCTTTTGACGGCTTGTAGCAGTGATGATGATAA
TACGGTCAATGATGAAACGACTCCTCCGGAAGAAGAGGCTGTGGTGACTGCTCCCGATGTGGTGGGAACGTATTGGGGAA
ATCTCGATATTTCAATGCTGCCCGATGGCTCCGACCAGGAAGTTGTGATTGCCGACGGACTTCCGAAGTTTATTACTTTC
TCTCAGGTCAGTGATACGGAAGTAAAGATGGAACTGAAGGAATTTGAACTGTTTATAAACGGAAACATATTAAAGTTCGG
CGATATCGTAATAGACAAGTGTGCAGTGAAAAAGGAAACGGACGCTTCGACTTTCACCGGACAGCAAGACCTTACTTTTC
AGGGGGATGCCGCTGCTTTGGGTACCTGTGCCACCAGTATAGAAGGAACGGTGCAAAGTGGAAATGCTACAATGAATATT
CAGGTAAAAGTACCTGCATTGAAGCAGACCGTGAAAGTTGCTTTCTCCGGTGTGAAGCAGGTGGAGGAATCCGGTAAGGA
TTAA

Upstream 100 bases:

>100_bases
TTGTGAATTCAAAATATCTTCGGAAAAGGAAGCAAATTGAACCTTTTTTCCTCTTTTTAGTTTATAAATGACGATTATTT
AATAACTAAACCCGAAAATT

Downstream 100 bases:

>100_bases
TCCGTCTTTGGTCAGCTAGAAAGCATATCCGAATCCGATATTCAAGTAGATCGGATACATAGCAAAAGTAATGGTCTGAA
AGTCATTTCTGAAGATATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKKNLLYLWALICSVSLLTACSSDDDNTVNDETTPPEEEAVVTAPDVVGTYWGNLDISMLPDGSDQEVVIADGLPKFITF
SQVSDTEVKMELKEFELFINGNILKFGDIVIDKCAVKKETDASTFTGQQDLTFQGDAAALGTCATSIEGTVQSGNATMNI
QVKVPALKQTVKVAFSGVKQVEESGKD

Sequences:

>Translated_187_residues
MKKNLLYLWALICSVSLLTACSSDDDNTVNDETTPPEEEAVVTAPDVVGTYWGNLDISMLPDGSDQEVVIADGLPKFITF
SQVSDTEVKMELKEFELFINGNILKFGDIVIDKCAVKKETDASTFTGQQDLTFQGDAAALGTCATSIEGTVQSGNATMNI
QVKVPALKQTVKVAFSGVKQVEESGKD
>Mature_187_residues
MKKNLLYLWALICSVSLLTACSSDDDNTVNDETTPPEEEAVVTAPDVVGTYWGNLDISMLPDGSDQEVVIADGLPKFITF
SQVSDTEVKMELKEFELFINGNILKFGDIVIDKCAVKKETDASTFTGQQDLTFQGDAAALGTCATSIEGTVQSGNATMNI
QVKVPALKQTVKVAFSGVKQVEESGKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20095; Mature: 20095

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLLYLWALICSVSLLTACSSDDDNTVNDETTPPEEEAVVTAPDVVGTYWGNLDISML
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHEEECCCEEEEEC
PDGSDQEVVIADGLPKFITFSQVSDTEVKMELKEFELFINGNILKFGDIVIDKCAVKKET
CCCCCCEEEEECCCCCCEEECCCCCCCEEEEEEEEEEEECCCEEEECCEEEHHHHCCCCC
DASTFTGQQDLTFQGDAAALGTCATSIEGTVQSGNATMNIQVKVPALKQTVKVAFSGVKQ
CCCCCCCCCCEEECCCCHHHHHHHHCCCCEEECCCEEEEEEEECHHHHHHHHHHHHHHHH
VEESGKD
HHHCCCC
>Mature Secondary Structure
MKKNLLYLWALICSVSLLTACSSDDDNTVNDETTPPEEEAVVTAPDVVGTYWGNLDISML
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHEEECCCEEEEEC
PDGSDQEVVIADGLPKFITFSQVSDTEVKMELKEFELFINGNILKFGDIVIDKCAVKKET
CCCCCCEEEEECCCCCCEEECCCCCCCEEEEEEEEEEEECCCEEEECCEEEHHHHCCCCC
DASTFTGQQDLTFQGDAAALGTCATSIEGTVQSGNATMNIQVKVPALKQTVKVAFSGVKQ
CCCCCCCCCCEEECCCCHHHHHHHHCCCCEEECCCEEEEEEEECHHHHHHHHHHHHHHHH
VEESGKD
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA