Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347362

Identifier: 29347362

GI number: 29347362

Start: 2450813

End: 2451952

Strand: Reverse

Name: 29347362

Synonym: BT_1952

Alternate gene names: NA

Gene position: 2451952-2450813 (Counterclockwise)

Preceding gene: 29347363

Following gene: 29347361

Centisome position: 39.17

GC content: 50.79

Gene sequence:

>1140_bases
ATGAACGCATTAAAGAATTTAAGCCTGATTTTGTTGCTTTCTCTGGCATTTACAGGCTGCCACAACAAAAGCTCAAAAAT
CAATGATTTCAACCTGCTGCTTTATGCTCCCGAATATGCCTCCGGCTTCGACATCAAAGGGGCGGGCGGGAAGGAAAGCG
TACTGATAACCGTCAGGAATCCCTGGCAGGGAGCGGACAGTGTAACCACATGGCTGTTTATCGTCCGCAACGGTGAAGAG
GTTCCCGAAGGGTTTGCAGGACAGGTACTCAAAGGAGACGCCAAACGCATCGTGGCGATGTCTTCCACTCATATCGCCAT
GCTTGACGCAATCGGTGAAGTCCGGTGTATAACCGGCGTTTCGGGAATCGACTACATTTCCAACCCAGACATCCAAGCCC
GCCGCGACAGTATTGGCGATGTCGGCTATGAAGGGAACATCAACTACGAGTTGCTGCTCTCGCTCGATCCCGACCTCGTT
CTGCTCTATGGGGTGAACGGCGCAAGCGCAATGGAAAGCAAACTCGAAGAACTCGACATACCGTTCATGTATGTCGGCGA
TTATCTTGAAGAGTCGCCTCTCGGCAAGGCCGAATGGATGGTAGTGCTTTCAGAAGTCACAGGAAAACGTGAGAAGGGTG
AAAAAGCCTTTGCCGCAATCCCGGTCAGATACAACGCCTTGAAAAAGAAAGTGGCCGACAGTACCCTCGGCACTCCTTCG
GTTATGCTTAATGTTCCCTATGGCGACTCGTGGTTCATGCCTTCAACCCAAAGTTATGTAGCCCGCTTGATTACTGATGC
GGGAGGCCGCTATATCTACCAGAAGAACACGGGAAACGCTTCTATCCCCATTGACTTAGAAGAAGCATATCTGCTCGCGT
CGGATGCGGACATGTGGCTGAACGTGGGAATGGCGAACTCCCTTGACGACTTGAAGGCATCATGTCCGAAATTCACCGAT
ACCCGATGTTTCAAAAATGGAGAGGTGTATAACAACAACGCCCGTACCAACACAGCCGGGGGTAACGACTATTACGAGTC
TGCCGTCGTGAATCCTGACATCGTGCTCCGCGACCTCGTGAAGATATTCCATCCTGAACTGGTGCAGGAAGAGTGTGTGT
ATTACAAGCAACTGAAATAG

Upstream 100 bases:

>100_bases
TATTGTCCCGTCCCATGCCGGGCATCAATTTCGAGATATTCATCGGCATAACACCCAAGTTCGGAAAAAACAAAAATAGT
AAACGATAATCTGCATCAAT

Downstream 100 bases:

>100_bases
ATGCGTTCCCGTTCGACTATATTATTCTCCATATTGATTACGCTCACGGTCGGTCTTTTTTTACTGGACTTGGCCGTGGG
AGCTGTCAACATTCCGATCC

Product: Fe3+ ABC transporter periplasmic iron-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MNALKNLSLILLLSLAFTGCHNKSSKINDFNLLLYAPEYASGFDIKGAGGKESVLITVRNPWQGADSVTTWLFIVRNGEE
VPEGFAGQVLKGDAKRIVAMSSTHIAMLDAIGEVRCITGVSGIDYISNPDIQARRDSIGDVGYEGNINYELLLSLDPDLV
LLYGVNGASAMESKLEELDIPFMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPS
VMLNVPYGDSWFMPSTQSYVARLITDAGGRYIYQKNTGNASIPIDLEEAYLLASDADMWLNVGMANSLDDLKASCPKFTD
TRCFKNGEVYNNNARTNTAGGNDYYESAVVNPDIVLRDLVKIFHPELVQEECVYYKQLK

Sequences:

>Translated_379_residues
MNALKNLSLILLLSLAFTGCHNKSSKINDFNLLLYAPEYASGFDIKGAGGKESVLITVRNPWQGADSVTTWLFIVRNGEE
VPEGFAGQVLKGDAKRIVAMSSTHIAMLDAIGEVRCITGVSGIDYISNPDIQARRDSIGDVGYEGNINYELLLSLDPDLV
LLYGVNGASAMESKLEELDIPFMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPS
VMLNVPYGDSWFMPSTQSYVARLITDAGGRYIYQKNTGNASIPIDLEEAYLLASDADMWLNVGMANSLDDLKASCPKFTD
TRCFKNGEVYNNNARTNTAGGNDYYESAVVNPDIVLRDLVKIFHPELVQEECVYYKQLK
>Mature_379_residues
MNALKNLSLILLLSLAFTGCHNKSSKINDFNLLLYAPEYASGFDIKGAGGKESVLITVRNPWQGADSVTTWLFIVRNGEE
VPEGFAGQVLKGDAKRIVAMSSTHIAMLDAIGEVRCITGVSGIDYISNPDIQARRDSIGDVGYEGNINYELLLSLDPDLV
LLYGVNGASAMESKLEELDIPFMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPS
VMLNVPYGDSWFMPSTQSYVARLITDAGGRYIYQKNTGNASIPIDLEEAYLLASDADMWLNVGMANSLDDLKASCPKFTD
TRCFKNGEVYNNNARTNTAGGNDYYESAVVNPDIVLRDLVKIFHPELVQEECVYYKQLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41658; Mature: 41658

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALKNLSLILLLSLAFTGCHNKSSKINDFNLLLYAPEYASGFDIKGAGGKESVLITVRN
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCEEEEEECC
PWQGADSVTTWLFIVRNGEEVPEGFAGQVLKGDAKRIVAMSSTHIAMLDAIGEVRCITGV
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHCCCEEEEECC
SGIDYISNPDIQARRDSIGDVGYEGNINYELLLSLDPDLVLLYGVNGASAMESKLEELDI
CCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCCC
PFMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPS
CEEEECCHHHCCCCCCHHHEEEEEHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCE
VMLNVPYGDSWFMPSTQSYVARLITDAGGRYIYQKNTGNASIPIDLEEAYLLASDADMWL
EEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHEEEEECCCCEEE
NVGMANSLDDLKASCPKFTDTRCFKNGEVYNNNARTNTAGGNDYYESAVVNPDIVLRDLV
ECCCCCCHHHHHHCCCCCCCCCEECCCCEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHH
KIFHPELVQEECVYYKQLK
HHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNALKNLSLILLLSLAFTGCHNKSSKINDFNLLLYAPEYASGFDIKGAGGKESVLITVRN
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCEEEEEECC
PWQGADSVTTWLFIVRNGEEVPEGFAGQVLKGDAKRIVAMSSTHIAMLDAIGEVRCITGV
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHCCCEEEEECC
SGIDYISNPDIQARRDSIGDVGYEGNINYELLLSLDPDLVLLYGVNGASAMESKLEELDI
CCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCCC
PFMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPS
CEEEECCHHHCCCCCCHHHEEEEEHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCE
VMLNVPYGDSWFMPSTQSYVARLITDAGGRYIYQKNTGNASIPIDLEEAYLLASDADMWL
EEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHEEEEECCCCEEE
NVGMANSLDDLKASCPKFTDTRCFKNGEVYNNNARTNTAGGNDYYESAVVNPDIVLRDLV
ECCCCCCHHHHHHCCCCCCCCCEECCCCEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHH
KIFHPELVQEECVYYKQLK
HHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]