Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347363

Identifier: 29347363

GI number: 29347363

Start: 2451964

End: 2454042

Strand: Reverse

Name: 29347363

Synonym: BT_1953

Alternate gene names: NA

Gene position: 2454042-2451964 (Counterclockwise)

Preceding gene: 29347364

Following gene: 29347362

Centisome position: 39.2

GC content: 52.09

Gene sequence:

>2079_bases
ATGAAAAGACATCTTATTCTATTGTTCGTGGGGGTAAGCCTGCCCTTTCTGCTTGCCGCCCAGCAGAAAAATTCCGTCAG
CATTACCAAAAGGGTACTACGTATTCCGGAGGTTACGGTGGTGGGCAAACGACCTATGAAGGATATAGGCGTGCAACGAA
CCCGTTTCGATTCCATCGCCATGAAAGAGAACATCGCCTTGTCTATGGCCGATGTGCTGACATTCAACTCATCCGTTTTT
GTCAAGAACTACGGACGCGCCACGTTATCCACCGTGGCTTTCCGGGGTACCTCTCCCTCGCATACCCAAGTGACGTGGAA
TGGTATGCGCATTAACAACCCGATGCTGGGCATGACGGATTTTTCCACCATCCCTTCTTACTTTATCGATGATGCCTCGC
TGCTGCACGGAACGTCATCGGTAAACGAAACGGGCGGCGGCTTGGGTGGTCTGGTCAGGCTCTCCACTTCTCCGGCCAAC
CATGAAGGGTTCGGGTTGCAGTACGTGCAGGGAGTGGGGTCGTTCAGCACGTTCGACGAGTTTCTCCGCCTGACCTACGG
TGACAAACACTGGCAGTCCTCCACCCGTGTGGTGTATTCCTCTTCCCCCAACGACTACAAATACCGAAACCGGGACAAGA
AGGAAAACATCTATGACGAGGACAAGAACATCATCGGTTCCTATTACCCGACGGAACGCAACCGCAGCGGGGCTTATAAG
GATCTGCACGTCTTGCAGGAAATTTATTATAACACGGGCGAAGGCGACAAGTTCGGGCTAAACGCCTGGTATATCAATTC
CAACCGGGAACTGGCGATGCTCAGCACGGATTACGGGAACGACATGGACTTCGAGAACCGCCAAAGGGAGCAGACGTTTC
GCGGCGTCCTCTCGTGGGATCGCGTGCGGGAGAAATGGAAGGTCGGTGTAAAAGGCGGCTATATACACACATGGATGGCC
TATGATTACAAGCGGGACAAGGGAAACGGCGAAATGGCTTCGATGACCCGCTCACGCAGTAAGATTAACACGTTCTACGG
AAGTGCGGACGGGGATTATGCTCCTTCAGAGAAATGGCTGTTCACGGCCGGTGTTTCCGTACACCAGCATTTGGTGGAAA
GCGCGGACAAAAATATCATCTCGCAGGAAGGTAACAAGGCTGTTGTCGGGTATGACAAGGGACGTGTCGAGTTTTCCGGT
TCCGTTTCTGCGAAATGGCGGCCTGTCGATCGTTTTGCCGCCTCGCTTGTCCTTCGCGAGGATATGTTCGGTACGGAATG
GGCCCCGGTTATCCCGGCTTTCTTCATCGACGGGGTACTGTCGAAAAAAGGCAATATCGTGGCGAAAGCATCCATCTCCC
GGAACTACCGTTTTCCCACGCTGAACGACCTCTATTTTCTGCCGGGCGGTAATCCCGACCTGAAAAGCGAGCACGGCTTC
ACATACGACGTGGGGTTGTCGTTCTCGGTGGGGAAAGAAAATGTATATGCTTTGAGCGGTGGTATCAACTGGTTCGATTC
GCACATCGACGACTGGATCATCTGGCTACCCACAACCAAGGGATTCTTCTCCCCCAGAAACCTCAAAAAGGTACATGCTT
ACGGGGCAGAGACCAACGCCCACCTTGATATAATGCTCGGAAAGGACTGGAAACTGGATATGAACGGAACTTTCTCGTGG
ACTCCCTCGATCAACGAGAGCGAACCGATGAGTCCGGCAGACCAATCCGTCGGCAAACAGTTGCCATACGTGCCGGAGTT
TTCCGCAACGGTGACCGGACGTCTGTCATGGCGGACATGGAGCCTGCTTTACAAATGGTGTTATTACAGCCAGCGTTATA
CCATGTCGAGTAATGACTATACCCTGACGGGCTATCTGCCCCCTTACTTCATGAATAACGTGACACTGGAAAAACAGCTC
TCTTTCCGATGGGCCGATCTGTCGCTAAAGGGCAGCATCAACAACCTGTTCGATGAAGAATACCTTTCCGTATTGTCCCG
TCCCATGCCGGGCATCAATTTCGAGATATTCATCGGCATAACACCCAAGTTCGGAAAAAACAAAAATAGTAAACGATAA

Upstream 100 bases:

>100_bases
CGTGTATCGCTATTCGCCGCAAGGCAAGCTGATCGATGAATTTTACGTGGGAATCATTCCGGGAGCTTTCTGCTGGAAAT
AACGAGGAAGGAGGACAAAA

Downstream 100 bases:

>100_bases
TCTGCATCAATATGAACGCATTAAAGAATTTAAGCCTGATTTTGTTGCTTTCTCTGGCATTTACAGGCTGCCACAACAAA
AGCTCAAAAATCAATGATTT

Product: putative TonB-linked outer membrane receptor

Products: NA

Alternate protein names: Vitamin; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Transport Of Vitamin B; Nb-Dependent Receptor; NB-Dependent Receptor Plug; Outer Membrane Vitamin; Iron Compound nB-Dependent Receptor; Outer Membrane Protein nB-Dependent Receptor; Outer Membrane Receptor Family Transporter

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MKRHLILLFVGVSLPFLLAAQQKNSVSITKRVLRIPEVTVVGKRPMKDIGVQRTRFDSIAMKENIALSMADVLTFNSSVF
VKNYGRATLSTVAFRGTSPSHTQVTWNGMRINNPMLGMTDFSTIPSYFIDDASLLHGTSSVNETGGGLGGLVRLSTSPAN
HEGFGLQYVQGVGSFSTFDEFLRLTYGDKHWQSSTRVVYSSSPNDYKYRNRDKKENIYDEDKNIIGSYYPTERNRSGAYK
DLHVLQEIYYNTGEGDKFGLNAWYINSNRELAMLSTDYGNDMDFENRQREQTFRGVLSWDRVREKWKVGVKGGYIHTWMA
YDYKRDKGNGEMASMTRSRSKINTFYGSADGDYAPSEKWLFTAGVSVHQHLVESADKNIISQEGNKAVVGYDKGRVEFSG
SVSAKWRPVDRFAASLVLREDMFGTEWAPVIPAFFIDGVLSKKGNIVAKASISRNYRFPTLNDLYFLPGGNPDLKSEHGF
TYDVGLSFSVGKENVYALSGGINWFDSHIDDWIIWLPTTKGFFSPRNLKKVHAYGAETNAHLDIMLGKDWKLDMNGTFSW
TPSINESEPMSPADQSVGKQLPYVPEFSATVTGRLSWRTWSLLYKWCYYSQRYTMSSNDYTLTGYLPPYFMNNVTLEKQL
SFRWADLSLKGSINNLFDEEYLSVLSRPMPGINFEIFIGITPKFGKNKNSKR

Sequences:

>Translated_692_residues
MKRHLILLFVGVSLPFLLAAQQKNSVSITKRVLRIPEVTVVGKRPMKDIGVQRTRFDSIAMKENIALSMADVLTFNSSVF
VKNYGRATLSTVAFRGTSPSHTQVTWNGMRINNPMLGMTDFSTIPSYFIDDASLLHGTSSVNETGGGLGGLVRLSTSPAN
HEGFGLQYVQGVGSFSTFDEFLRLTYGDKHWQSSTRVVYSSSPNDYKYRNRDKKENIYDEDKNIIGSYYPTERNRSGAYK
DLHVLQEIYYNTGEGDKFGLNAWYINSNRELAMLSTDYGNDMDFENRQREQTFRGVLSWDRVREKWKVGVKGGYIHTWMA
YDYKRDKGNGEMASMTRSRSKINTFYGSADGDYAPSEKWLFTAGVSVHQHLVESADKNIISQEGNKAVVGYDKGRVEFSG
SVSAKWRPVDRFAASLVLREDMFGTEWAPVIPAFFIDGVLSKKGNIVAKASISRNYRFPTLNDLYFLPGGNPDLKSEHGF
TYDVGLSFSVGKENVYALSGGINWFDSHIDDWIIWLPTTKGFFSPRNLKKVHAYGAETNAHLDIMLGKDWKLDMNGTFSW
TPSINESEPMSPADQSVGKQLPYVPEFSATVTGRLSWRTWSLLYKWCYYSQRYTMSSNDYTLTGYLPPYFMNNVTLEKQL
SFRWADLSLKGSINNLFDEEYLSVLSRPMPGINFEIFIGITPKFGKNKNSKR
>Mature_692_residues
MKRHLILLFVGVSLPFLLAAQQKNSVSITKRVLRIPEVTVVGKRPMKDIGVQRTRFDSIAMKENIALSMADVLTFNSSVF
VKNYGRATLSTVAFRGTSPSHTQVTWNGMRINNPMLGMTDFSTIPSYFIDDASLLHGTSSVNETGGGLGGLVRLSTSPAN
HEGFGLQYVQGVGSFSTFDEFLRLTYGDKHWQSSTRVVYSSSPNDYKYRNRDKKENIYDEDKNIIGSYYPTERNRSGAYK
DLHVLQEIYYNTGEGDKFGLNAWYINSNRELAMLSTDYGNDMDFENRQREQTFRGVLSWDRVREKWKVGVKGGYIHTWMA
YDYKRDKGNGEMASMTRSRSKINTFYGSADGDYAPSEKWLFTAGVSVHQHLVESADKNIISQEGNKAVVGYDKGRVEFSG
SVSAKWRPVDRFAASLVLREDMFGTEWAPVIPAFFIDGVLSKKGNIVAKASISRNYRFPTLNDLYFLPGGNPDLKSEHGF
TYDVGLSFSVGKENVYALSGGINWFDSHIDDWIIWLPTTKGFFSPRNLKKVHAYGAETNAHLDIMLGKDWKLDMNGTFSW
TPSINESEPMSPADQSVGKQLPYVPEFSATVTGRLSWRTWSLLYKWCYYSQRYTMSSNDYTLTGYLPPYFMNNVTLEKQL
SFRWADLSLKGSINNLFDEEYLSVLSRPMPGINFEIFIGITPKFGKNKNSKR

Specific function: Unknown

COG id: COG4206

COG function: function code H; Outer membrane cobalamin receptor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78460; Mature: 78460

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHLILLFVGVSLPFLLAAQQKNSVSITKRVLRIPEVTVVGKRPMKDIGVQRTRFDSIA
CCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHH
MKENIALSMADVLTFNSSVFVKNYGRATLSTVAFRGTSPSHTQVTWNGMRINNPMLGMTD
HHCCCEEEEEHHHEECCEEEEECCCCEEEEEEEEECCCCCCCEEEECCEEECCCCCCCCC
FSTIPSYFIDDASLLHGTSSVNETGGGLGGLVRLSTSPANHEGFGLQYVQGVGSFSTFDE
HHHCCHHHCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCHHHHHH
FLRLTYGDKHWQSSTRVVYSSSPNDYKYRNRDKKENIYDEDKNIIGSYYPTERNRSGAYK
HHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHH
DLHVLQEIYYNTGEGDKFGLNAWYINSNRELAMLSTDYGNDMDFENRQREQTFRGVLSWD
HHHHHHHHHHCCCCCCEECEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
RVREKWKVGVKGGYIHTWMAYDYKRDKGNGEMASMTRSRSKINTFYGSADGDYAPSEKWL
HHHHHHEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCEE
FTAGVSVHQHLVESADKNIISQEGNKAVVGYDKGRVEFSGSVSAKWRPVDRFAASLVLRE
EEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHH
DMFGTEWAPVIPAFFIDGVLSKKGNIVAKASISRNYRFPTLNDLYFLPGGNPDLKSEHGF
HCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCE
TYDVGLSFSVGKENVYALSGGINWFDSHIDDWIIWLPTTKGFFSPRNLKKVHAYGAETNA
EEEECEEEEECCCEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
HLDIMLGKDWKLDMNGTFSWTPSINESEPMSPADQSVGKQLPYVPEFSATVTGRLSWRTW
EEEEEECCCEEECCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEHHHH
SLLYKWCYYSQRYTMSSNDYTLTGYLPPYFMNNVTLEKQLSFRWADLSLKGSINNLFDEE
HHHHHHHHHCCEEEECCCCEEEEECCCHHHHCCEEEEEECEEEEEEEEEECCHHHHHHHH
YLSVLSRPMPGINFEIFIGITPKFGKNKNSKR
HHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKRHLILLFVGVSLPFLLAAQQKNSVSITKRVLRIPEVTVVGKRPMKDIGVQRTRFDSIA
CCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHH
MKENIALSMADVLTFNSSVFVKNYGRATLSTVAFRGTSPSHTQVTWNGMRINNPMLGMTD
HHCCCEEEEEHHHEECCEEEEECCCCEEEEEEEEECCCCCCCEEEECCEEECCCCCCCCC
FSTIPSYFIDDASLLHGTSSVNETGGGLGGLVRLSTSPANHEGFGLQYVQGVGSFSTFDE
HHHCCHHHCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCHHHHHH
FLRLTYGDKHWQSSTRVVYSSSPNDYKYRNRDKKENIYDEDKNIIGSYYPTERNRSGAYK
HHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHH
DLHVLQEIYYNTGEGDKFGLNAWYINSNRELAMLSTDYGNDMDFENRQREQTFRGVLSWD
HHHHHHHHHHCCCCCCEECEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
RVREKWKVGVKGGYIHTWMAYDYKRDKGNGEMASMTRSRSKINTFYGSADGDYAPSEKWL
HHHHHHEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCEE
FTAGVSVHQHLVESADKNIISQEGNKAVVGYDKGRVEFSGSVSAKWRPVDRFAASLVLRE
EEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHH
DMFGTEWAPVIPAFFIDGVLSKKGNIVAKASISRNYRFPTLNDLYFLPGGNPDLKSEHGF
HCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCE
TYDVGLSFSVGKENVYALSGGINWFDSHIDDWIIWLPTTKGFFSPRNLKKVHAYGAETNA
EEEECEEEEECCCEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
HLDIMLGKDWKLDMNGTFSWTPSINESEPMSPADQSVGKQLPYVPEFSATVTGRLSWRTW
EEEEEECCCEEECCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEHHHH
SLLYKWCYYSQRYTMSSNDYTLTGYLPPYFMNNVTLEKQLSFRWADLSLKGSINNLFDEE
HHHHHHHHHCCEEEECCCCEEEEECCCHHHHCCEEEEEECEEEEEEEEEECCHHHHHHHH
YLSVLSRPMPGINFEIFIGITPKFGKNKNSKR
HHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA