Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347249

Identifier: 29347249

GI number: 29347249

Start: 2309021

End: 2310448

Strand: Reverse

Name: 29347249

Synonym: BT_1839

Alternate gene names: NA

Gene position: 2310448-2309021 (Counterclockwise)

Preceding gene: 29347250

Following gene: 29347243

Centisome position: 36.91

GC content: 43.21

Gene sequence:

>1428_bases
ATGAAAAACGACAAACTCCAAAGTAGTATGAAAACAATAAAAAACACGTTTTTTCTAAGCATAGTCTGTGCCGCCAGTGT
TGTTTCTTCAGTAGCTCATGAACTCGAAGCAAATGAGAAATACCCCGGGAAGTCGGTGAAGGCACAGACAAGAAAAGAGA
TTGTTACGTTCTTTTCTGAATCTCTTTCCGGTAAGACAACCACTTTTGACGCAGGAAAACCGTTGAAACTGTCAGAAGTA
GAACACTATCGTGATGTCGTATGGCAGTTGTGGAAAGAGGCAAATGATGGTTTTAAAGAAGAAAAATTAATAGCTTTGGA
TACACTCTCATCCGCTTCTACCGGCTACTGGAAACTTCCTGATAGTTTGGAACCCAATGCAGTGATGCCCTATTACTGGG
GAATGAAAGGGACAGATGAAATAGGAAATGAACTTCCATTATTCCTCTATCTGCATGGTTCGGGACCCAAAGAGCGGGAA
TGGAGTACCGGATTGAATATTTGCCGGAATTTTGATGATGCTCCTTCCGTTTACTTTATACCACAGATTCCGAACGAAGG
CGAGTACTATCGTTGGTGGCAGAAAGCTAAACAGTTTGCCTGGGAGAAATTGCTGCGACAATCCTTACTCTTGGGAAAGA
TTGATCCCAACAGAGTGTATGTTTTTGGAATCTCGGAAGGCGGATATGGCAGTCAGCGTCTGGCCTCATTTTATGCTGAT
TATTGGGCTGCTGCGGGACCGATGGCAGGAGGGGAACCTTTAAAGAATGCTCCTGCGGAGAATTGTAGTAATATTGCTTT
TTCTTTGCGGACAGGAGATAAGGATACTGGATTCTACCGGAATACACTGACCGGATATGTACGGGAAGCATTCGATAGTT
TGGCGCATCAGCATCCCGGCTATTTCACTCACAAGATAGAACTGATTCCCGGAATGGGGCATAGTATTGATTATCGTCCG
ACGACTCCCTGGCTGAAGCAATATGTCCGTAATCCTTATCCCAAATATGTAAGCTGGGAGAATTTTGAAATGGACGGACT
CTACCGGAAAGGATTTTATAATCTGTATGTGAAGGAAAGATCCGATGAAGAGGGGAAGTCGCGTACTTATTATGAAATGA
GTATTTCGGGAAATCATATTTCATTGAAAGTCGATGATGTTGTTTATGAAGCCACGGAGAAGGATCAACGATGGGGAATA
GAGATGAAGTTTGCGAAGAAATATGCGCAGGCGCATAAAGGGAAAGTGGTCATTTATCTCTGCGACGAGCTGGTCGATTT
AACTGAAAAGGTGACTCTGACGGTGAATGGCAAAAAGGTTTTCGAGGGAAAAGTAAAGGCTGATTTGAAGAATATGGTTA
ATAGCTGTGCGGTGTTCTTCGATCCGCAACGACTTTATCCGGCAGCTATCGAGGTAGAATTAAAATAG

Upstream 100 bases:

>100_bases
TAAAAACTTTGGATATTAGTTTTTAGATTAGACTGAAAAGGTAAGGAGAACCGGACAGTAATTTCTATCTTTGTGCATAC
ATTAAATCGTTAGCAAATAT

Downstream 100 bases:

>100_bases
ATGAGATTGCTCAAAAAAAAGTATCCCCGGTCGTATATCCAAGAATTACTCTTGTGTACGACCGGGGATACGTATTTATC
ATAAATTATAAATGGCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSESLSGKTTTFDAGKPLKLSEV
EHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLPDSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKERE
WSTGLNICRNFDDAPSVYFIPQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD
YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPGYFTHKIELIPGMGHSIDYRP
TTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKERSDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGI
EMKFAKKYAQAHKGKVVIYLCDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK

Sequences:

>Translated_475_residues
MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSESLSGKTTTFDAGKPLKLSEV
EHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLPDSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKERE
WSTGLNICRNFDDAPSVYFIPQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD
YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPGYFTHKIELIPGMGHSIDYRP
TTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKERSDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGI
EMKFAKKYAQAHKGKVVIYLCDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK
>Mature_475_residues
MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSESLSGKTTTFDAGKPLKLSEV
EHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLPDSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKERE
WSTGLNICRNFDDAPSVYFIPQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD
YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPGYFTHKIELIPGMGHSIDYRP
TTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKERSDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGI
EMKFAKKYAQAHKGKVVIYLCDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54296; Mature: 54296

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SLSGKTTTFDAGKPLKLSEVEHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLP
HCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECC
DSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKEREWSTGLNICRNFDDAPSVYFI
CCCCCCEECCEECCCCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEE
PQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHH
YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPG
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
YFTHKIELIPGMGHSIDYRPTTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKER
CEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC
SDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGIEMKFAKKYAQAHKGKVVIYL
CCCCCCCCEEEEEEECCCEEEEEEHHHEEECCCCHHHCCCCHHHHHHHHHHHCCCEEEEE
CDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK
CHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHEEEECCHHCCCEEEEEEEC
>Mature Secondary Structure
MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SLSGKTTTFDAGKPLKLSEVEHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLP
HCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECC
DSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKEREWSTGLNICRNFDDAPSVYFI
CCCCCCEECCEECCCCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEE
PQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHH
YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPG
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
YFTHKIELIPGMGHSIDYRPTTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKER
CEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC
SDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGIEMKFAKKYAQAHKGKVVIYL
CCCCCCCCEEEEEEECCCEEEEEEHHHEEECCCCHHHCCCCHHHHHHHHHHHCCCEEEEE
CDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK
CHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHEEEECCHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA