Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346890

Identifier: 29346890

GI number: 29346890

Start: 1824115

End: 1824921

Strand: Reverse

Name: 29346890

Synonym: BT_1480

Alternate gene names: NA

Gene position: 1824921-1824115 (Counterclockwise)

Preceding gene: 29346891

Following gene: 29346889

Centisome position: 29.15

GC content: 47.71

Gene sequence:

>807_bases
ATGCAAGGCAAGAAATTTATCTCCCCCGGAGCATGGTTTTCGATGAATTATCCGTCGGACTGGAACGAGTTTGAAGATGG
CGAAGGCTCTTTTCTTTTCTATAACCCCGATGTATGGACGGGCAACTTTCGTATATCAGCTTTTAAAGGCAACGCCTCAT
ACGGTAAAGATGCCATCCGTCAGGAACTGAAAGAAAACGATTCGGCTTCATTGGTGAAAATCGGTACATGGGACTGTGCC
TACAGTAAAGAAATGTTTCAGGAAGAGGGCACTTATTATACTTCTCACCTGTGGATAACAGGAACCGGCAATATCGCTTT
TGAATGTTCTTTCACCGTACCCAAAGGCGGAAGCGCCAAGGAAGCGGAAGAGGTTATCGCTACACTGGAAGCCCGCAAGG
AAGGCGAGAAATATCCCGCAGAACTGATTCCCGTCCGCCTATCGGAAATCTATCAGATCAATGAAGGCTACGAGTGGGTA
GTATCTACCGTCAAACAGGAACTCAAAAAAGACTTTCAGGGAGTGGAAGAGGACTTGGAGAAGATTCAGCAAGTGATAGA
CAGCGGTAAGATCAGCCCCAAGAAGAAAGATGAATGGCTCGCCATCGGTATAACGGTATGCGCGATTCTGACTAACGAAG
TGGAAGGCATGGAGTGGAAAACCTTGATTGACGGCAATCGGGAAGTCCCCGTACTCGAATACCAAGGCCGGACCATCGAC
CCGATGAAAATCGCATGGAGCAAAGTTAAGGCCGGCCAACCCTGCAACATTGCCGAAGCATATCAATCGGCAATCGATCA
TCACTAA

Upstream 100 bases:

>100_bases
GGAGATTTCCAAAGAAGTACGGAGGAAAATACAGCCGATAGGAAAGTGAAATTCATTTTTAATTCGTATTTTTGCCCAAG
TAATCATTTAATGAAAAAGG

Downstream 100 bases:

>100_bases
ATCACGAACCAGCTAATCACTAAATTACGTGGCAGTACCTTATTTACAAGTAGACAACCTGACCAAGTCCTTCGGCGACT
TGGTTCTTTTTGAAAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MQGKKFISPGAWFSMNYPSDWNEFEDGEGSFLFYNPDVWTGNFRISAFKGNASYGKDAIRQELKENDSASLVKIGTWDCA
YSKEMFQEEGTYYTSHLWITGTGNIAFECSFTVPKGGSAKEAEEVIATLEARKEGEKYPAELIPVRLSEIYQINEGYEWV
VSTVKQELKKDFQGVEEDLEKIQQVIDSGKISPKKKDEWLAIGITVCAILTNEVEGMEWKTLIDGNREVPVLEYQGRTID
PMKIAWSKVKAGQPCNIAEAYQSAIDHH

Sequences:

>Translated_268_residues
MQGKKFISPGAWFSMNYPSDWNEFEDGEGSFLFYNPDVWTGNFRISAFKGNASYGKDAIRQELKENDSASLVKIGTWDCA
YSKEMFQEEGTYYTSHLWITGTGNIAFECSFTVPKGGSAKEAEEVIATLEARKEGEKYPAELIPVRLSEIYQINEGYEWV
VSTVKQELKKDFQGVEEDLEKIQQVIDSGKISPKKKDEWLAIGITVCAILTNEVEGMEWKTLIDGNREVPVLEYQGRTID
PMKIAWSKVKAGQPCNIAEAYQSAIDHH
>Mature_268_residues
MQGKKFISPGAWFSMNYPSDWNEFEDGEGSFLFYNPDVWTGNFRISAFKGNASYGKDAIRQELKENDSASLVKIGTWDCA
YSKEMFQEEGTYYTSHLWITGTGNIAFECSFTVPKGGSAKEAEEVIATLEARKEGEKYPAELIPVRLSEIYQINEGYEWV
VSTVKQELKKDFQGVEEDLEKIQQVIDSGKISPKKKDEWLAIGITVCAILTNEVEGMEWKTLIDGNREVPVLEYQGRTID
PMKIAWSKVKAGQPCNIAEAYQSAIDHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30300; Mature: 30300

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKKFISPGAWFSMNYPSDWNEFEDGEGSFLFYNPDVWTGNFRISAFKGNASYGKDAIR
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCEEECCEEEEEEECCCCCCHHHHH
QELKENDSASLVKIGTWDCAYSKEMFQEEGTYYTSHLWITGTGNIAFECSFTVPKGGSAK
HHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEEECCCCCCHH
EAEEVIATLEARKEGEKYPAELIPVRLSEIYQINEGYEWVVSTVKQELKKDFQGVEEDLE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
KIQQVIDSGKISPKKKDEWLAIGITVCAILTNEVEGMEWKTLIDGNREVPVLEYQGRTID
HHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCC
PMKIAWSKVKAGQPCNIAEAYQSAIDHH
HHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MQGKKFISPGAWFSMNYPSDWNEFEDGEGSFLFYNPDVWTGNFRISAFKGNASYGKDAIR
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCEEECCEEEEEEECCCCCCHHHHH
QELKENDSASLVKIGTWDCAYSKEMFQEEGTYYTSHLWITGTGNIAFECSFTVPKGGSAK
HHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEEECCCCCCHH
EAEEVIATLEARKEGEKYPAELIPVRLSEIYQINEGYEWVVSTVKQELKKDFQGVEEDLE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
KIQQVIDSGKISPKKKDEWLAIGITVCAILTNEVEGMEWKTLIDGNREVPVLEYQGRTID
HHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCC
PMKIAWSKVKAGQPCNIAEAYQSAIDHH
HHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA