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The map label for this gene is ypdA [C]

Identifier: 29346869

GI number: 29346869

Start: 1796636

End: 1797616

Strand: Reverse

Name: ypdA [C]

Synonym: BT_1459

Alternate gene names: 29346869

Gene position: 1797616-1796636 (Counterclockwise)

Preceding gene: 29346870

Following gene: 29346868

Centisome position: 28.71

GC content: 44.85

Gene sequence:

>981_bases
ATGGTGTTGGGCACTATCTCCTTCAATCAGGTATTCATCATTTTTATGGACTATCGGGATATATTGGGCGGATGGATTTA
TGTGTTCACATTTATATATATGCTCACATACATTGGCGTTACCTGCCTGAACCTTTTCTGGTTATTCCCGAAATATTTGT
TGAAAAGGCATTATATGACTTATCTGTCAGTGCTGTCTGTGGCGATGGTCATTGCGCTGCTGATACAGATGGTCATAGAA
TACCTTGCTTACTCCCATTGGCCGCAGCTTCATGCGCGGGGATCGTATTTTTCGGTTCCCATGCTGATGGACTACATTTC
TTCTTTTATGCTGTCAACGCTTTGCATGATAGGAGGAACGATGACTTTGCTTCTGAAAGAATGGATGATTGAGAATCAGC
GTGTTTCACAGATGGAAAAGGCGCACGTACTGTCCGAAGTGGAACAACTCAAAGAACAGGTCAGCCCCGAACTTCTTTTC
AAAACGTTGCATCATTCGGGTGAACTAACATTGACCGAGCCGGAAAAGGCCTCGAAGATGTTGATGAAGCTGAGTCAGTT
ACTGCGCTATCAGTTATATGATTGCAGCCGGCAAAAAGTATTGCTCAGTAGTGAAATCGCTTTCCTGACCAACTATCTGA
CATTGGAGCAAAGCTCCCTTCCGCAATTCCGCTATCAGTTTACTTCGGAAGGGGAGGTAAACAGGATGCTGGTTCCTCCT
CTGCTCTTCATTCCTTTTGTGCAGCATATCATGGAGTTGACGCACGAACAGCAAATCTTGCTTCCTGTCTCTCTGGACAT
TCATCTGAAAGCGGAGAAGGCTACGATTGTATTCACTTGTATGTGTCCGCAACTTAATCTCTCCGTAAACAGGGGGCTGG
AACGGATCAGACAAAGGCTGGACTTATTGTATGGCGACCGTTACGGACTATCTTTGACTACGGAATGTATAAGACTGGAA
CTGAATGGAGGGGAACAATGA

Upstream 100 bases:

>100_bases
TATGGCAACTGAAACAACTGCAGCAGGCAACGAATCGGCCTTTTTATATAGATTGCTCGTAAGTCCGGCATTCCGATGGA
TGCGGTATCTGATACTTGTC

Downstream 100 bases:

>100_bases
GAATAAGTACAAACGATAAAAATACACTCGACAGGAATCCCGGTGACGGAACCATGAACGGCAAAAGTGTCACCGCTTTT
CTGCTGAGTCCTCATTGCAG

Product: two-component system sensor

Products: NA

Alternate protein names: Two-Component System Sensor Histidine Kinase; Histidine Kinase InteRNAl Region; Signal Transduction Histidine Kinase Lyts; Sensor Histidine Kinase; Histidine Kinase; Two-Component Sensor Histidine Kinase; Two-Component System Sensor; Signal Transduction Protein; Regulator Of Cell Autolysis; Signaling Protein Without Kinase Domain Protein; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component Histidine Kinase; Regulator Of Cell Autolysis-Like; Signaling Protein Without Kinase Domain; Two-Component System Sensor Protein No Kinase Domain; Two Component System Sensor Protein; Two-Component System Sensor Protein Without Kinase Domain; Two Component Sensor Histidine Kinase; Histidine Kinase Superfamily; Two-Component System Sensor Protein; Two-Component System Sensor But No Kinase Domain

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MVLGTISFNQVFIIFMDYRDILGGWIYVFTFIYMLTYIGVTCLNLFWLFPKYLLKRHYMTYLSVLSVAMVIALLIQMVIE
YLAYSHWPQLHARGSYFSVPMLMDYISSFMLSTLCMIGGTMTLLLKEWMIENQRVSQMEKAHVLSEVEQLKEQVSPELLF
KTLHHSGELTLTEPEKASKMLMKLSQLLRYQLYDCSRQKVLLSSEIAFLTNYLTLEQSSLPQFRYQFTSEGEVNRMLVPP
LLFIPFVQHIMELTHEQQILLPVSLDIHLKAEKATIVFTCMCPQLNLSVNRGLERIRQRLDLLYGDRYGLSLTTECIRLE
LNGGEQ

Sequences:

>Translated_326_residues
MVLGTISFNQVFIIFMDYRDILGGWIYVFTFIYMLTYIGVTCLNLFWLFPKYLLKRHYMTYLSVLSVAMVIALLIQMVIE
YLAYSHWPQLHARGSYFSVPMLMDYISSFMLSTLCMIGGTMTLLLKEWMIENQRVSQMEKAHVLSEVEQLKEQVSPELLF
KTLHHSGELTLTEPEKASKMLMKLSQLLRYQLYDCSRQKVLLSSEIAFLTNYLTLEQSSLPQFRYQFTSEGEVNRMLVPP
LLFIPFVQHIMELTHEQQILLPVSLDIHLKAEKATIVFTCMCPQLNLSVNRGLERIRQRLDLLYGDRYGLSLTTECIRLE
LNGGEQ
>Mature_326_residues
MVLGTISFNQVFIIFMDYRDILGGWIYVFTFIYMLTYIGVTCLNLFWLFPKYLLKRHYMTYLSVLSVAMVIALLIQMVIE
YLAYSHWPQLHARGSYFSVPMLMDYISSFMLSTLCMIGGTMTLLLKEWMIENQRVSQMEKAHVLSEVEQLKEQVSPELLF
KTLHHSGELTLTEPEKASKMLMKLSQLLRYQLYDCSRQKVLLSSEIAFLTNYLTLEQSSLPQFRYQFTSEGEVNRMLVPP
LLFIPFVQHIMELTHEQQILLPVSLDIHLKAEKATIVFTCMCPQLNLSVNRGLERIRQRLDLLYGDRYGLSLTTECIRLE
LNGGEQ

Specific function: Unknown

COG id: COG3275

COG function: function code T; Putative regulator of cell autolysis

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38039; Mature: 38039

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGTISFNQVFIIFMDYRDILGGWIYVFTFIYMLTYIGVTCLNLFWLFPKYLLKRHYMT
CEEEEEECCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSVLSVAMVIALLIQMVIEYLAYSHWPQLHARGSYFSVPMLMDYISSFMLSTLCMIGGT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MTLLLKEWMIENQRVSQMEKAHVLSEVEQLKEQVSPELLFKTLHHSGELTLTEPEKASKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCHHHHHH
LMKLSQLLRYQLYDCSRQKVLLSSEIAFLTNYLTLEQSSLPQFRYQFTSEGEVNRMLVPP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCHHHH
LLFIPFVQHIMELTHEQQILLPVSLDIHLKAEKATIVFTCMCPQLNLSVNRGLERIRQRL
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHH
DLLYGDRYGLSLTTECIRLELNGGEQ
HHHHCCCCCCEEEEEEEEEEECCCCC
>Mature Secondary Structure
MVLGTISFNQVFIIFMDYRDILGGWIYVFTFIYMLTYIGVTCLNLFWLFPKYLLKRHYMT
CEEEEEECCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLSVLSVAMVIALLIQMVIEYLAYSHWPQLHARGSYFSVPMLMDYISSFMLSTLCMIGGT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MTLLLKEWMIENQRVSQMEKAHVLSEVEQLKEQVSPELLFKTLHHSGELTLTEPEKASKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCHHHHHH
LMKLSQLLRYQLYDCSRQKVLLSSEIAFLTNYLTLEQSSLPQFRYQFTSEGEVNRMLVPP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCHHHH
LLFIPFVQHIMELTHEQQILLPVSLDIHLKAEKATIVFTCMCPQLNLSVNRGLERIRQRL
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHH
DLLYGDRYGLSLTTECIRLELNGGEQ
HHHHCCCCCCEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA