| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is glxK [H]
Identifier: 29346847
GI number: 29346847
Start: 1766896
End: 1768029
Strand: Reverse
Name: glxK [H]
Synonym: BT_1437
Alternate gene names: 29346847
Gene position: 1768029-1766896 (Counterclockwise)
Preceding gene: 29346849
Following gene: 29346846
Centisome position: 28.24
GC content: 45.5
Gene sequence:
>1134_bases ATGAAGAAAGTAGTAGTAGCGATGGATTTTTTCAAAGGGTGTCTTTCCTCATCAGAGGTGGAAAAGGCGGTGGAAGAAGG CATAAAGCTGGTTTGTCCGGATTGTGAAGTCATTCGTTTTCCGATAGCCGACGGAGGTGAGGGAATATTGACTGTCTTGG TAGAAGCAACACGAGGCACTTATCAGAAGATCATAGCGAATGATCCTTTGATGCGCCCGATAGAAACCACTTATGGAGTT TCGGGTGATAAACGCGTTGCTTTTATTGAGATGGCCACCGTGAATGGTCTGCCGCTATTATCAGAAACTGAACGAAATCC GATGCTGACCACTACTTATGGAACCGGTGAATTGATATTGCACGCTATTGAACAGGGATATCGGGAATTTGTCATTGGTA TCGGAGGAAGTGCTACGAATGATGCCGGAGTAGGTATGTTACAAGCATTAGGAGCCCGATTTCTCAATAAGGATGGAGCA GTCTTGGGAGAAGGAGGCGAAATCCTGCATCGAATTGCCGCTATTGATTTTTCTTCCGTTCACCCTGCACTTGAAGATAC TCGTTTCACGATAGCCTGTGATGTACGAAATCCCTTTTGTGGTCCGGAAGGCGCTGCGCATGTTTTTGCCCGGCAGAAGG GGGCGGATGATGCAATGATAGAGAAATTAGATGCGGGTATGCAGTCTTTTTCCCGATTGATCCATTCAACTACCGGAAGA GAAATCACTCACGTTCCCGGAGCAGGAGCTGCCGGAGGCTTGGGAGGTGCTTTTCTTGCTTTTCTGAATGCTGAACTAAA GCCCGGCATTGATTTACTGCTCCAAACATTGAAATTTAGTGAGAAAATAAAAGGTGCTGATCTGATCATAACCGGTGAGG GGAGAACAGACCGTCAATCTTTAATGGGAAAAGTACCTTCCGGAATATTAGAAGAGGCGAAACGACAAGGGATACCGGTC ATTGTTGTGGCAGGCAGCATAGAGGATACGGAAATTCTGAATCAGGCAGGTTTTCAAGGTCTCTTTTCTATCATTCCTTC GCCCATGTCTTTAGAAACAGCCATGAAGCCGGAAGTCGCTAAGAAAAATATTTGCCGGACTGTTGCTCAAATTATCTCTT TAGTGAATTTATAG
Upstream 100 bases:
>100_bases CATAATACCTATTCTTTTGAAATGTTCCTGAAAAAATGACTGCAAAGGTACGTAAACTTCCCGTTTCTCAATATATTTGT CACTATTAAATCTATAAGTA
Downstream 100 bases:
>100_bases TGGCGTTTGGAGTGTAAATTGTCGTTAATTCATTTTTGACTTACTGAACTATTCGTGGTACCTGATGTTGTTAAATAAAA AAGGAGGATAAAATGGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKKVVVAMDFFKGCLSSSEVEKAVEEGIKLVCPDCEVIRFPIADGGEGILTVLVEATRGTYQKIIANDPLMRPIETTYGV SGDKRVAFIEMATVNGLPLLSETERNPMLTTTYGTGELILHAIEQGYREFVIGIGGSATNDAGVGMLQALGARFLNKDGA VLGEGGEILHRIAAIDFSSVHPALEDTRFTIACDVRNPFCGPEGAAHVFARQKGADDAMIEKLDAGMQSFSRLIHSTTGR EITHVPGAGAAGGLGGAFLAFLNAELKPGIDLLLQTLKFSEKIKGADLIITGEGRTDRQSLMGKVPSGILEEAKRQGIPV IVVAGSIEDTEILNQAGFQGLFSIIPSPMSLETAMKPEVAKKNICRTVAQIISLVNL
Sequences:
>Translated_377_residues MKKVVVAMDFFKGCLSSSEVEKAVEEGIKLVCPDCEVIRFPIADGGEGILTVLVEATRGTYQKIIANDPLMRPIETTYGV SGDKRVAFIEMATVNGLPLLSETERNPMLTTTYGTGELILHAIEQGYREFVIGIGGSATNDAGVGMLQALGARFLNKDGA VLGEGGEILHRIAAIDFSSVHPALEDTRFTIACDVRNPFCGPEGAAHVFARQKGADDAMIEKLDAGMQSFSRLIHSTTGR EITHVPGAGAAGGLGGAFLAFLNAELKPGIDLLLQTLKFSEKIKGADLIITGEGRTDRQSLMGKVPSGILEEAKRQGIPV IVVAGSIEDTEILNQAGFQGLFSIIPSPMSLETAMKPEVAKKNICRTVAQIISLVNL >Mature_377_residues MKKVVVAMDFFKGCLSSSEVEKAVEEGIKLVCPDCEVIRFPIADGGEGILTVLVEATRGTYQKIIANDPLMRPIETTYGV SGDKRVAFIEMATVNGLPLLSETERNPMLTTTYGTGELILHAIEQGYREFVIGIGGSATNDAGVGMLQALGARFLNKDGA VLGEGGEILHRIAAIDFSSVHPALEDTRFTIACDVRNPFCGPEGAAHVFARQKGADDAMIEKLDAGMQSFSRLIHSTTGR EITHVPGAGAAGGLGGAFLAFLNAELKPGIDLLLQTLKFSEKIKGADLIITGEGRTDRQSLMGKVPSGILEEAKRQGIPV IVVAGSIEDTEILNQAGFQGLFSIIPSPMSLETAMKPEVAKKNICRTVAQIISLVNL
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=370, Percent_Identity=44.0540540540541, Blast_Score=292, Evalue=3e-80, Organism=Escherichia coli, GI1786724, Length=375, Percent_Identity=41.6, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 40071; Mature: 40071
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVVVAMDFFKGCLSSSEVEKAVEEGIKLVCPDCEVIRFPIADGGEGILTVLVEATRGT CCEEEEHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCEEEEEEHHHCCH YQKIIANDPLMRPIETTYGVSGDKRVAFIEMATVNGLPLLSETERNPMLTTTYGTGELIL HHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHH HAIEQGYREFVIGIGGSATNDAGVGMLQALGARFLNKDGAVLGEGGEILHRIAAIDFSSV HHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCHHHC HPALEDTRFTIACDVRNPFCGPEGAAHVFARQKGADDAMIEKLDAGMQSFSRLIHSTTGR CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EITHVPGAGAAGGLGGAFLAFLNAELKPGIDLLLQTLKFSEKIKGADLIITGEGRTDRQS EEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH LMGKVPSGILEEAKRQGIPVIVVAGSIEDTEILNQAGFQGLFSIIPSPMSLETAMKPEVA HHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHH KKNICRTVAQIISLVNL HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKVVVAMDFFKGCLSSSEVEKAVEEGIKLVCPDCEVIRFPIADGGEGILTVLVEATRGT CCEEEEHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCEEEEEEHHHCCH YQKIIANDPLMRPIETTYGVSGDKRVAFIEMATVNGLPLLSETERNPMLTTTYGTGELIL HHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHH HAIEQGYREFVIGIGGSATNDAGVGMLQALGARFLNKDGAVLGEGGEILHRIAAIDFSSV HHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCHHHC HPALEDTRFTIACDVRNPFCGPEGAAHVFARQKGADDAMIEKLDAGMQSFSRLIHSTTGR CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EITHVPGAGAAGGLGGAFLAFLNAELKPGIDLLLQTLKFSEKIKGADLIITGEGRTDRQS EEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH LMGKVPSGILEEAKRQGIPVIVVAGSIEDTEILNQAGFQGLFSIIPSPMSLETAMKPEVA HHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHH KKNICRTVAQIISLVNL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132; 10086841 [H]