Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346849

Identifier: 29346849

GI number: 29346849

Start: 1769414

End: 1770895

Strand: Reverse

Name: 29346849

Synonym: BT_1439

Alternate gene names: NA

Gene position: 1770895-1769414 (Counterclockwise)

Preceding gene: 29346850

Following gene: 29346847

Centisome position: 28.29

GC content: 44.74

Gene sequence:

>1482_bases
ATGAAAAAGATAAAAATTCAATCTATACTTACTGCTGTTGCCGGACTGTTTCTGGCGACAAGTTGTAGCAGTAGCTTTCT
GGATACGGAACCTACGGATGCGGTAAGCTCCGATCAGGTAGCAGTAGCCGGAAATGCAGAACGTCTCTTCAACGGAGCTT
GGTATAACCTGTTTGAATACGGCACGACGTATGCCAATATTGGTTATCGGGCACTTCAATGTCAGGATGATATGATGGCA
AGCGATGTTGTCTCCCGTCCGAAATATGGGTTCAATTCTTCCTATCAGTTTAATGATGTGGCGATTCCTTCCGATGGAAG
AACTTCGTTTGCCTGGTATCTGATCTATAAGACAATTGATAACTGCAACACTGCCATTTCGATTAAGGGTGACTCCGAGG
AACTTCGGCAGGCACAGGGACAGGCATTGGCTTTGCGTGCCTTTTGTTATCTGCATTTGGTACAGCATTATCAGTTTACA
TATTTGAAAGATAAAGATGCTCCCTGTGTGCCTATATATACGGAACCGACTACAAGCGGTACCAAGCCGAAAGGCAAATC
GACAGTGGCGCAAGTTTATCAGCAGATCTTTGATGATTTGAATCTTGCACAGGATTATCTGACAAACTACGTCCGCAAGG
GAGACGGGCAGAAATTCAAACCGAATACGGATGTTGTCAACGGTCTTATGGCACGTGCTTACTTATTGACAGGACAATGG
GGAGAGGCCGCCAAAGCTGCCGAAGCTGCACGCAAAGGATATTCATTAATGACTACCACTGCCGAGTACGAAGGTTTTAA
TAATATTTCCAATAAGGAATGGATTTGGGGATCTCCTCAAACACTTTCGCAATCGGATGCAAGTTATAATTTCTACTATC
TGGATGCAACGTATGTCGGAGCTTACAGTAGCTTTATGGCCGACCCGCACTTGATGGATACTTTTGTTAAAGGTGACATC
CGTCTGCCTCTTTTCCAATGGATGCGTGAAGGATATCTGGGTTATAAGAAATTCCATATGCGTTCGGATGATACTGCAGA
TCTGGTACTGATGCGTTCGGCAGAAATGTATCTGATAGAAGCGGAAGCCAAGGTCAGAGATGGAGTAGCACTGGATCAGG
CTGTTGCCCCATTGAATACATTACGTACTGCCCGTGGCGTAGGTAATTATGATGTGACAGGGAAAACAAAAGAGCAGGTG
ATTGACGAAATTCTGATGGAGCGCCGACGCGAACTTTGGGGAGAAGGATTCGGTATAACGGATGTACTCCGTAATCAGAA
GGCGGTAGAACGCATGGCTTTATCTGAGGATATGCAGAAAACGGAAGTGGATTGCTGGCAGGAAGGCGGCAGTTTTGCGA
AAAGAAATCCGTTAGGACATTGGTTCCTTAATTTTCCGGATGGTAAAGCGTTCTCAGCGAACAGTTCTTATTATCTGTAT
GCTATCCCTGAAAAAGAGATTAATGCAAACCCTAACTTATAA

Upstream 100 bases:

>100_bases
GACCCTGAACAGGGAATCACGGGTATCACTTATTACCGTTATCCGGCTATGCGAACTATTTCCGGAGGTATCAATCTATC
TTTCTAAAATTACACGATAT

Downstream 100 bases:

>100_bases
ATAGCTCTCTTAATTTTTTGACTTTGACCTTAACTTGTAGACCGGTATACGTCGTGACGATGCATACCGGTCGTTTTTTT
ATACCTGTATCTTCTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MKKIKIQSILTAVAGLFLATSCSSSFLDTEPTDAVSSDQVAVAGNAERLFNGAWYNLFEYGTTYANIGYRALQCQDDMMA
SDVVSRPKYGFNSSYQFNDVAIPSDGRTSFAWYLIYKTIDNCNTAISIKGDSEELRQAQGQALALRAFCYLHLVQHYQFT
YLKDKDAPCVPIYTEPTTSGTKPKGKSTVAQVYQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQW
GEAAKAAEAARKGYSLMTTTAEYEGFNNISNKEWIWGSPQTLSQSDASYNFYYLDATYVGAYSSFMADPHLMDTFVKGDI
RLPLFQWMREGYLGYKKFHMRSDDTADLVLMRSAEMYLIEAEAKVRDGVALDQAVAPLNTLRTARGVGNYDVTGKTKEQV
IDEILMERRRELWGEGFGITDVLRNQKAVERMALSEDMQKTEVDCWQEGGSFAKRNPLGHWFLNFPDGKAFSANSSYYLY
AIPEKEINANPNL

Sequences:

>Translated_493_residues
MKKIKIQSILTAVAGLFLATSCSSSFLDTEPTDAVSSDQVAVAGNAERLFNGAWYNLFEYGTTYANIGYRALQCQDDMMA
SDVVSRPKYGFNSSYQFNDVAIPSDGRTSFAWYLIYKTIDNCNTAISIKGDSEELRQAQGQALALRAFCYLHLVQHYQFT
YLKDKDAPCVPIYTEPTTSGTKPKGKSTVAQVYQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQW
GEAAKAAEAARKGYSLMTTTAEYEGFNNISNKEWIWGSPQTLSQSDASYNFYYLDATYVGAYSSFMADPHLMDTFVKGDI
RLPLFQWMREGYLGYKKFHMRSDDTADLVLMRSAEMYLIEAEAKVRDGVALDQAVAPLNTLRTARGVGNYDVTGKTKEQV
IDEILMERRRELWGEGFGITDVLRNQKAVERMALSEDMQKTEVDCWQEGGSFAKRNPLGHWFLNFPDGKAFSANSSYYLY
AIPEKEINANPNL
>Mature_493_residues
MKKIKIQSILTAVAGLFLATSCSSSFLDTEPTDAVSSDQVAVAGNAERLFNGAWYNLFEYGTTYANIGYRALQCQDDMMA
SDVVSRPKYGFNSSYQFNDVAIPSDGRTSFAWYLIYKTIDNCNTAISIKGDSEELRQAQGQALALRAFCYLHLVQHYQFT
YLKDKDAPCVPIYTEPTTSGTKPKGKSTVAQVYQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQW
GEAAKAAEAARKGYSLMTTTAEYEGFNNISNKEWIWGSPQTLSQSDASYNFYYLDATYVGAYSSFMADPHLMDTFVKGDI
RLPLFQWMREGYLGYKKFHMRSDDTADLVLMRSAEMYLIEAEAKVRDGVALDQAVAPLNTLRTARGVGNYDVTGKTKEQV
IDEILMERRRELWGEGFGITDVLRNQKAVERMALSEDMQKTEVDCWQEGGSFAKRNPLGHWFLNFPDGKAFSANSSYYLY
AIPEKEINANPNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55454; Mature: 55454

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKIQSILTAVAGLFLATSCSSSFLDTEPTDAVSSDQVAVAGNAERLFNGAWYNLFEY
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHCCHHHHHHHH
GTTYANIGYRALQCQDDMMASDVVSRPKYGFNSSYQFNDVAIPSDGRTSFAWYLIYKTID
CCCCHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECC
NCNTAISIKGDSEELRQAQGQALALRAFCYLHLVQHYQFTYLKDKDAPCVPIYTEPTTSG
CCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCC
TKPKGKSTVAQVYQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCC
GEAAKAAEAARKGYSLMTTTAEYEGFNNISNKEWIWGSPQTLSQSDASYNFYYLDATYVG
CHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECHHHH
AYSSFMADPHLMDTFVKGDIRLPLFQWMREGYLGYKKFHMRSDDTADLVLMRSAEMYLIE
HHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHEEECCCCCCCEEEEEECCCEEEEE
AEAKVRDGVALDQAVAPLNTLRTARGVGNYDVTGKTKEQVIDEILMERRRELWGEGFGIT
ECCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DVLRNQKAVERMALSEDMQKTEVDCWQEGGSFAKRNPLGHWFLNFPDGKAFSANSSYYLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEE
AIPEKEINANPNL
EECHHHCCCCCCC
>Mature Secondary Structure
MKKIKIQSILTAVAGLFLATSCSSSFLDTEPTDAVSSDQVAVAGNAERLFNGAWYNLFEY
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHCCHHHHHHHH
GTTYANIGYRALQCQDDMMASDVVSRPKYGFNSSYQFNDVAIPSDGRTSFAWYLIYKTID
CCCCHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECC
NCNTAISIKGDSEELRQAQGQALALRAFCYLHLVQHYQFTYLKDKDAPCVPIYTEPTTSG
CCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCC
TKPKGKSTVAQVYQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCC
GEAAKAAEAARKGYSLMTTTAEYEGFNNISNKEWIWGSPQTLSQSDASYNFYYLDATYVG
CHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECHHHH
AYSSFMADPHLMDTFVKGDIRLPLFQWMREGYLGYKKFHMRSDDTADLVLMRSAEMYLIE
HHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHEEECCCCCCCEEEEEECCCEEEEE
AEAKVRDGVALDQAVAPLNTLRTARGVGNYDVTGKTKEQVIDEILMERRRELWGEGFGIT
ECCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DVLRNQKAVERMALSEDMQKTEVDCWQEGGSFAKRNPLGHWFLNFPDGKAFSANSSYYLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEE
AIPEKEINANPNL
EECHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA