| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is ymgE [C]
Identifier: 29346846
GI number: 29346846
Start: 1766558
End: 1766803
Strand: Reverse
Name: ymgE [C]
Synonym: BT_1436
Alternate gene names: 29346846
Gene position: 1766803-1766558 (Counterclockwise)
Preceding gene: 29346847
Following gene: 29346845
Centisome position: 28.22
GC content: 40.24
Gene sequence:
>246_bases ATGGGCTTTATTTGGTATATTATTATTGGTATTATAGCCGGCTTTCTTGCAGGTAAGATAATGCGTGGCGGAGGTTTTGG CCTTATTATAAATTTGTTACTTGGTATTCTCGGAGGAGTGCTGGGCGGTTGGGTATTTGCCCTTTTCGGACTTGCGGCTT CGGGATTGATTGGAAGTTTGATAACTTCTACCGTAGGAGCTATTCTGGTATTATGGATTGCTTCTTTATTCTCGAAATCT AAATAA
Upstream 100 bases:
>100_bases ATTTATAGTGGCGTTTGGAGTGTAAATTGTCGTTAATTCATTTTTGACTTACTGAACTATTCGTGGTACCTGATGTTGTT AAATAAAAAAGGAGGATAAA
Downstream 100 bases:
>100_bases AGATTTTATATAATTTATTTTTAATCTAAAAACAGAACTTAATTATGGAATGTAGACATGGGAATTTCTGGATTGGACTT GGAATTGGTTCAATCCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MGFIWYIIIGIIAGFLAGKIMRGGGFGLIINLLLGILGGVLGGWVFALFGLAASGLIGSLITSTVGAILVLWIASLFSKS K
Sequences:
>Translated_81_residues MGFIWYIIIGIIAGFLAGKIMRGGGFGLIINLLLGILGGVLGGWVFALFGLAASGLIGSLITSTVGAILVLWIASLFSKS K >Mature_80_residues GFIWYIIIGIIAGFLAGKIMRGGGFGLIINLLLGILGGVLGGWVFALFGLAASGLIGSLITSTVGAILVLWIASLFSKSK
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8297; Mature: 8166
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIWYIIIGIIAGFLAGKIMRGGGFGLIINLLLGILGGVLGGWVFALFGLAASGLIGSL CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITSTVGAILVLWIASLFSKSK HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GFIWYIIIGIIAGFLAGKIMRGGGFGLIINLLLGILGGVLGGWVFALFGLAASGLIGSL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITSTVGAILVLWIASLFSKSK HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA