| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346837
Identifier: 29346837
GI number: 29346837
Start: 1758954
End: 1759793
Strand: Reverse
Name: 29346837
Synonym: BT_1427
Alternate gene names: NA
Gene position: 1759793-1758954 (Counterclockwise)
Preceding gene: 29346839
Following gene: 29346836
Centisome position: 28.11
GC content: 37.98
Gene sequence:
>840_bases ATGGAAAATTTCGTAAGAAATAGTAAGCTGAACATAGAAAAAGAAATTAAAAGGATTGAGCAACAGCCGATTGCCCTTCT CGAGCGGATAAAGCAGATAATAGATGTCATACAGACATCACTTACTTTGCTGAAAAGGGCAGTTGCCGAATATCAATTTC AGAATCCTGAAGAAGAAATTCAGTTCTTTAAAGTCTGGAAACCGCAGATTTCCGGCTTGCTGATGTTTTATATCCGTTTA TATCAGATTGAAAAGAACCGTGTCGGCAAATCCCTGTCGGCTCAATGCAAATATTTAAAGATGGAGCTGGAAAATATACA GAAGTCATTTTTGAATAATAGCTTCTATGATTATTATCGTGCCGGTCAGACCGAACTTGATAACCAATATTTTATCCGTG AGAATTATGATATTCTTTCCGATGTTCATTGTCATTTGCTGGACAGGGATTCTTCTTTTACCACCTTACACGATTCAAGC GTTGCAATGATTCTGGCGAATAGTCATTTGATAGAATATGTGTCAGACGAGATCGATTCGCTGTCAGACAAACTGCATCT TAAATTCACCTCCATAGTAGACAGTAAGTTGCTGCAATGGACGGATAGTAAAGTCGCCTTGGTTGAATTCATCTATGCGA TCTATGCGGGCAAATGCTTTAATAATGGAAATACCAGTCTGAAAGACATCGCTTTTTGTTGCGAGATACTTTTCAATATC GAGATTGGGGACTTTTATCGTATCTTCTTGGAAATTAGGAATCGGAAGAAGAGCAGGACACAATTTCTTGATAAGTTGAA GGATAAAATACAGAAGATGATGGAGGAGCTCGACAGATAA
Upstream 100 bases:
>100_bases ATTCACAGCATCGTTTTTTTAAGACGAGTGCAATTTGGTATTCAGGCTTTTAGTCAGACTCCTTTTGACGGTTCGAAAGC TGTGGGTACATTGAGAATGA
Downstream 100 bases:
>100_bases ATTTCACGCCATCTTGTGACATCTTGTGAATTTTATAAATGGATTATATCCAACTTTGCTTTATGGATACAACATTTACA TGGGAGATAAAGGCAAAGAA
Product: tetracycline resistance element mobilization regulatory protein rteC
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEIQFFKVWKPQISGLLMFYIRL YQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYRAGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSS VAMILANSHLIEYVSDEIDSLSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR
Sequences:
>Translated_279_residues MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEIQFFKVWKPQISGLLMFYIRL YQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYRAGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSS VAMILANSHLIEYVSDEIDSLSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR >Mature_279_residues MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEIQFFKVWKPQISGLLMFYIRL YQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYRAGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSS VAMILANSHLIEYVSDEIDSLSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33088; Mature: 33088
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEI CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QFFKVWKPQISGLLMFYIRLYQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSSVAMILANSHLIEYVSDEIDS CCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHH LSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEI CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QFFKVWKPQISGLLMFYIRLYQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSSVAMILANSHLIEYVSDEIDS CCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHH LSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA