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The map label for this gene is 29346840

Identifier: 29346840

GI number: 29346840

Start: 1761113

End: 1761931

Strand: Reverse

Name: 29346840

Synonym: BT_1430

Alternate gene names: NA

Gene position: 1761931-1761113 (Counterclockwise)

Preceding gene: 29346842

Following gene: 29346839

Centisome position: 28.14

GC content: 43.47

Gene sequence:

>819_bases
ATGTACACAGAATATCAGCCCTCTCGTCTACTCGCTCCCTATATTGATAATTATTGGGAATTTAAGGGAACTCCGGAATA
TGGTATGCGTATCCATATTTTGCCGGATGGTTGTACCGATTTCATTTTTACGTTGGGAGAAGCAGTGAGTAAGGTAAAAG
AAGAAACGCTGGTCATGCAGCCTTATCGTTCTTACTTTGTGGGTCCGATGACGAAATATTCGGAGCTTGTCACTTATGCC
GAATTCGTTCATCAGTTTGGCGTTCGTTTTCTGCCTTGTGGGTTATCCGGATTTACAAAGCTGCCTTTGCATGAGTTTGC
GAATTACAGAATCAGTACGAATGAAATGCAGGCGGTTTTTGACAGTACCTTTATCGAGAGGTTATGTGAGCAGAATGATG
TCCGGGGACGGATTCAGGTCGTTGAAGAATATCTCCTGGCGTATCTTGCACATAACTATCAGCCTGTTGATACCCAAGTT
GCCGCAGCGGTGAATATAATCAATCAGTCCGCAGGGAAGCGTTCTGTTCGTAGTCTGATGGATGAGGTATGCCTGTGCCA
GCGTCATTTTGAACGGAAGTTTAAACATAACACCGGATTCACTCCTAAAGAATATAGCCGCATTGTTAAATTCAAGAATG
CAGTAGAATTACTGAGAAACACGACTTCTGTCAACCTGCTGACTACCGCCATCGACGCAGGATATTATGACCTGGCACAT
TTCTCAAAAGAAATCAAAACATTGTCGGGCAATACACCTTCATCATTCCTTTCGCTTACAGTTCCGGAGGATATAACGCT
GACTTATATCGAACCTTAG

Upstream 100 bases:

>100_bases
TGCGTTTTGCTGTTTTTTGAAACACAAATGTACATGATATTTTTTGCAAAATACATGAATTGGCATTTATTCTCTTTATA
TTTGCGTATAAAATAGACCG

Downstream 100 bases:

>100_bases
CACCGGATTAGTAAAAGTCGATTTTTTACAATAGAACGGACATCTGTGCCGTTATCTTTGTGGCGAAATAAAATAAATAC
AATAAGATTATGTCAACAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MYTEYQPSRLLAPYIDNYWEFKGTPEYGMRIHILPDGCTDFIFTLGEAVSKVKEETLVMQPYRSYFVGPMTKYSELVTYA
EFVHQFGVRFLPCGLSGFTKLPLHEFANYRISTNEMQAVFDSTFIERLCEQNDVRGRIQVVEEYLLAYLAHNYQPVDTQV
AAAVNIINQSAGKRSVRSLMDEVCLCQRHFERKFKHNTGFTPKEYSRIVKFKNAVELLRNTTSVNLLTTAIDAGYYDLAH
FSKEIKTLSGNTPSSFLSLTVPEDITLTYIEP

Sequences:

>Translated_272_residues
MYTEYQPSRLLAPYIDNYWEFKGTPEYGMRIHILPDGCTDFIFTLGEAVSKVKEETLVMQPYRSYFVGPMTKYSELVTYA
EFVHQFGVRFLPCGLSGFTKLPLHEFANYRISTNEMQAVFDSTFIERLCEQNDVRGRIQVVEEYLLAYLAHNYQPVDTQV
AAAVNIINQSAGKRSVRSLMDEVCLCQRHFERKFKHNTGFTPKEYSRIVKFKNAVELLRNTTSVNLLTTAIDAGYYDLAH
FSKEIKTLSGNTPSSFLSLTVPEDITLTYIEP
>Mature_272_residues
MYTEYQPSRLLAPYIDNYWEFKGTPEYGMRIHILPDGCTDFIFTLGEAVSKVKEETLVMQPYRSYFVGPMTKYSELVTYA
EFVHQFGVRFLPCGLSGFTKLPLHEFANYRISTNEMQAVFDSTFIERLCEQNDVRGRIQVVEEYLLAYLAHNYQPVDTQV
AAAVNIINQSAGKRSVRSLMDEVCLCQRHFERKFKHNTGFTPKEYSRIVKFKNAVELLRNTTSVNLLTTAIDAGYYDLAH
FSKEIKTLSGNTPSSFLSLTVPEDITLTYIEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31280; Mature: 31280

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTEYQPSRLLAPYIDNYWEFKGTPEYGMRIHILPDGCTDFIFTLGEAVSKVKEETLVMQ
CCCCCCCCHHHHHHHCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
PYRSYFVGPMTKYSELVTYAEFVHQFGVRFLPCGLSGFTKLPLHEFANYRISTNEMQAVF
HHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHH
DSTFIERLCEQNDVRGRIQVVEEYLLAYLAHNYQPVDTQVAAAVNIINQSAGKRSVRSLM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
DEVCLCQRHFERKFKHNTGFTPKEYSRIVKFKNAVELLRNTTSVNLLTTAIDAGYYDLAH
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH
FSKEIKTLSGNTPSSFLSLTVPEDITLTYIEP
HHHHHHHHCCCCCCCEEEEECCCCEEEEEECC
>Mature Secondary Structure
MYTEYQPSRLLAPYIDNYWEFKGTPEYGMRIHILPDGCTDFIFTLGEAVSKVKEETLVMQ
CCCCCCCCHHHHHHHCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
PYRSYFVGPMTKYSELVTYAEFVHQFGVRFLPCGLSGFTKLPLHEFANYRISTNEMQAVF
HHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHH
DSTFIERLCEQNDVRGRIQVVEEYLLAYLAHNYQPVDTQVAAAVNIINQSAGKRSVRSLM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
DEVCLCQRHFERKFKHNTGFTPKEYSRIVKFKNAVELLRNTTSVNLLTTAIDAGYYDLAH
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH
FSKEIKTLSGNTPSSFLSLTVPEDITLTYIEP
HHHHHHHHCCCCCCCEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]