| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346831
Identifier: 29346831
GI number: 29346831
Start: 1755340
End: 1755654
Strand: Reverse
Name: 29346831
Synonym: BT_1421
Alternate gene names: NA
Gene position: 1755654-1755340 (Counterclockwise)
Preceding gene: 29346834
Following gene: 29346830
Centisome position: 28.04
GC content: 42.86
Gene sequence:
>315_bases ATGTATCACAAGAGAAAAATAAGAGCATACATAGCATGGATGTTATTCATGACATTCATTCCCTTCTTTGTAGTGAAAAC CTTTCACTATCATGGAAGTGAAGATGAAACGTCATGCTCTCATGCCGACCATTCCCGGAGTCATGCCGAGGATTGTGCGA TATGTAAATACTCCCTTTCTCTCTTTACAGAACCTCAGCCGGTAGAATTTCATTGTATATTGACGCTCGTTCCTTACGAG ACGATTACTTACCAGGATAAGGTTGTCTGCAAACGAACTTATTCGCATCACCTACGCGCGCCTCCTGCCGCATAA
Upstream 100 bases:
>100_bases TTACTATTCTTTTAATAACACATATTAAGTCAGATAATTTGCACCTTTTGTTTCATACGAGTATCTTTGCCTTACTGTTC TGTTAAAACGATAGGGGAGA
Downstream 100 bases:
>100_bases TTACATATTCATATTTTCTAGGAAGACAGGTTCATTGTAACTTGTCCTCACATTCATTTTACACATTATATAAAAGATTG TAATTGATGCGTATCGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MYHKRKIRAYIAWMLFMTFIPFFVVKTFHYHGSEDETSCSHADHSRSHAEDCAICKYSLSLFTEPQPVEFHCILTLVPYE TITYQDKVVCKRTYSHHLRAPPAA
Sequences:
>Translated_104_residues MYHKRKIRAYIAWMLFMTFIPFFVVKTFHYHGSEDETSCSHADHSRSHAEDCAICKYSLSLFTEPQPVEFHCILTLVPYE TITYQDKVVCKRTYSHHLRAPPAA >Mature_104_residues MYHKRKIRAYIAWMLFMTFIPFFVVKTFHYHGSEDETSCSHADHSRSHAEDCAICKYSLSLFTEPQPVEFHCILTLVPYE TITYQDKVVCKRTYSHHLRAPPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12228; Mature: 12228
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHKRKIRAYIAWMLFMTFIPFFVVKTFHYHGSEDETSCSHADHSRSHAEDCAICKYSLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LFTEPQPVEFHCILTLVPYETITYQDKVVCKRTYSHHLRAPPAA HCCCCCCCEEEEEEEEECCCEECCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYHKRKIRAYIAWMLFMTFIPFFVVKTFHYHGSEDETSCSHADHSRSHAEDCAICKYSLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LFTEPQPVEFHCILTLVPYETITYQDKVVCKRTYSHHLRAPPAA HCCCCCCCEEEEEEEEECCCEECCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA