| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346834
Identifier: 29346834
GI number: 29346834
Start: 1756610
End: 1757227
Strand: Reverse
Name: 29346834
Synonym: BT_1424
Alternate gene names: NA
Gene position: 1757227-1756610 (Counterclockwise)
Preceding gene: 29346835
Following gene: 29346831
Centisome position: 28.07
GC content: 41.91
Gene sequence:
>618_bases ATGAGTGCATTTTATGATTTGTATGAGACTCCGGACCCTAATGATACAGGGGAGAAACAACCCCTTCATGCCCGCATTGT TCCGAGTGGAACTTATTCGAAAAAAGATTTTATAGAACGCGTATCCCGTCACCAACCTTTTCCGCACAATATAATTGAAG GAGTACTTGGCGCTGTAGTTGATGAACTGGCCGAAGCCTTGGCGGATGGATACATCGTGGAATTGGGCGAACTTGGACAT TTCAGCATTTCGTTGAAGTGTACCCATAAAGTGATGACTAAGAAAGAAATTCGCGCCGAGTCTATCCGTTTTGACAATGT TCATTTACGTACTTCCAAAGAATTTAAAAAGAAAATAAAGCGGGAGATAGAACTTGAACGAGTTGAGAACTCCAATGAAA AAACTCACAATGCTAAAATATCCATTGAAGACCGTCTCCAAATGTTGCAGGAATTTCTGAAGAAAAACGGAGGAATCACG CGTATAGAATATAGCAGACTGACCGGACTCCCCCGATTGAAAGCAATTGATGATTTGAATACTTTCATCAAGGAGGGAAC TCTTCGCAAGAGGGGAGCAGGACGAACTGTCTTTTATGTGTGGAAACAGAAGGAATGA
Upstream 100 bases:
>100_bases TTATTTTTATGCTAAACTAAAGTTAAGGTTTAGTATAAGAGGACTGAAATGTTAGCGAATAAACTGATAGACACATAAAC AACTAATAAAAAATATACTA
Downstream 100 bases:
>100_bases AACAATGAATTAAAATATATATGGATTAATTATTAGAGGATACTACAGAAAACCACTCGCACACTAATTTTGTTCTACCT GTCAGTTTCTTATCTATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSAFYDLYETPDPNDTGEKQPLHARIVPSGTYSKKDFIERVSRHQPFPHNIIEGVLGAVVDELAEALADGYIVELGELGH FSISLKCTHKVMTKKEIRAESIRFDNVHLRTSKEFKKKIKREIELERVENSNEKTHNAKISIEDRLQMLQEFLKKNGGIT RIEYSRLTGLPRLKAIDDLNTFIKEGTLRKRGAGRTVFYVWKQKE
Sequences:
>Translated_205_residues MSAFYDLYETPDPNDTGEKQPLHARIVPSGTYSKKDFIERVSRHQPFPHNIIEGVLGAVVDELAEALADGYIVELGELGH FSISLKCTHKVMTKKEIRAESIRFDNVHLRTSKEFKKKIKREIELERVENSNEKTHNAKISIEDRLQMLQEFLKKNGGIT RIEYSRLTGLPRLKAIDDLNTFIKEGTLRKRGAGRTVFYVWKQKE >Mature_204_residues SAFYDLYETPDPNDTGEKQPLHARIVPSGTYSKKDFIERVSRHQPFPHNIIEGVLGAVVDELAEALADGYIVELGELGHF SISLKCTHKVMTKKEIRAESIRFDNVHLRTSKEFKKKIKREIELERVENSNEKTHNAKISIEDRLQMLQEFLKKNGGITR IEYSRLTGLPRLKAIDDLNTFIKEGTLRKRGAGRTVFYVWKQKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23656; Mature: 23525
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFYDLYETPDPNDTGEKQPLHARIVPSGTYSKKDFIERVSRHQPFPHNIIEGVLGAVV CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH DELAEALADGYIVELGELGHFSISLKCTHKVMTKKEIRAESIRFDNVHLRTSKEFKKKIK HHHHHHHHCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHEEECCEEECCCHHHHHHHH REIELERVENSNEKTHNAKISIEDRLQMLQEFLKKNGGITRIEYSRLTGLPRLKAIDDLN HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCHHHHHHHH TFIKEGTLRKRGAGRTVFYVWKQKE HHHHCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure SAFYDLYETPDPNDTGEKQPLHARIVPSGTYSKKDFIERVSRHQPFPHNIIEGVLGAVV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH DELAEALADGYIVELGELGHFSISLKCTHKVMTKKEIRAESIRFDNVHLRTSKEFKKKIK HHHHHHHHCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHEEECCEEECCCHHHHHHHH REIELERVENSNEKTHNAKISIEDRLQMLQEFLKKNGGITRIEYSRLTGLPRLKAIDDLN HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCHHHHHHHH TFIKEGTLRKRGAGRTVFYVWKQKE HHHHCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA