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The map label for this gene is cirA [C]

Identifier: 29346830

GI number: 29346830

Start: 1753097

End: 1755253

Strand: Reverse

Name: cirA [C]

Synonym: BT_1420

Alternate gene names: 29346830

Gene position: 1755253-1753097 (Counterclockwise)

Preceding gene: 29346831

Following gene: 29346829

Centisome position: 28.04

GC content: 48.26

Gene sequence:

>2157_bases
ATGCGTATCGGAATTATTTCGGGCGTAATAGGGTTGTTTGTAACCTTACCCGTCCACGCACAGAAGTCCGATTCAATCAA
GAGTATGCTTTTGCCTGATGTTGTTGTGACCGAGTCGTACCAACAGCGTCAAGCCAAGAAGTCTGCACTTACGGTTGAAG
TGATAGAACAGGATTTTCTGCGCAAACATTTTACGGGAAACTTCATGCAGGCAGTGGAGAACATTCCCGGAGTACAAGCT
ATGGACATAGGCTCCGGCTTCTCCAAACCGATGATTCGGGGGATGGGATTCAACCGGATAGCCGTATTGGAAAACGGAAT
CAAGCAGGAAGGCCAGCAATGGGGAGCCGACCACGGACTGGAACTGGATGCCTTCAATATCGAAGCAGTCAATGTCTTGA
AAGGTCCTTCCTCACTGCTTTACGGCAGTGATGCCATGGGTGGAGTGATTGATATAGCCTCTCCTCCCATACCTTCTGCG
AATATGCTCTTCGGCGATGTCACCCTATTGGGCAAATCCGTCAACGGAACACTGGCAGGTTCGCTGATGCTGGGACTTAA
AAAGAATGCCTGGTATGCGCAAATCCGTTATTCCGAACAGCACTTCGGTGATTACCGCATCCCTACGGATACCATTGTCT
ACCTGACTCAGAAAATGCCCGTCTATGGGCGTAAACTGAAAAATACGGCAGGAGTGGAACGCAATATCGGCCTTTTCACC
CAATATCAGCGAAAAGGCTATAGAGCAGACTATTCCATCAGTAATGTCTATCAGAAGACGGGGTTCTTTCCGGGCGCACA
CGGTGTCCCCGACGCATCGCGCGTAGAAGATGACGGAGACAGCCGGAATATCGAACTGCCTTACAGCAAGGTAAATCATC
TGAAAGTAACCACACATCAGCAATATGCTTGGGAGAAACTGATCCTGTCCGGTGATTTGGGATTTCAGAATAACCATCGG
GAGGAATGGAGTGCTTTTCATACTCATTACGGCTCCCAGCCTGCGCCGGAGAAGGACCCGGACAAAGAACTGGCTTTCGA
TCTGAACACATACAGTGCTTCGGTAAAAGCCCGCTTTATTGGCTCTTCTTCATGGGAGCATACGTTGGGGTGGGATAGGC
AACATCAGCAGAACGACATTTCCGGCTATTCATTTTTGTTGCCGGAGTACCATCGTTCTAGTACCGGATTGCTCTGGCTT
ACGACGTATAAGCCTAATAACATTCTCTCTGTCAGTGGAGGCGTGCGATATGATTATGGTTATATTGGCATCTCTCCGCA
CGAGGATGTTTATCTGGCGGATTACCTTCGGAGGCAAGGATATGATGATGAACAAGTAGAGTCCTATAAATGGAACAGTC
ATGCCGTCCGAAAGCATTTCGGTGACTATTCCTTTTCTTTGGGACTGGTATGGACACCCTCCGTTCAGCACATGGTGAAA
GTGAACATCGGACGTAGCTTCCGCCTCCCCGGAGCCAATGAACTGGCTGCTAACGGTGTACATCACGGCACTTTCCGTCA
CGAGCAGGGAGATGCTTCTCTGAAATCCGAGCAAGGATGGCAGATGGATGCTTCCTACAACCTGCGATATCACGGACTTT
CCGTTTCCGTGTCTCCTTTTGTCAGTTGGTTCAGTAACTACATCTTTCTGCGTCCCACAGGCGAATGGTCAGTTCTGCCG
CATGCCGGACAGATTTACCGCTACACGGGAGCCGAAGCACTGTTTGCCGGAACGGAGGCTACGATAGACATTAACTTTCT
GCGTCACTTCAATTACCGTATCTCCGGAGAATACGTCTACACCTACAACTGTGACGAGCATATTCCGTTAAGTTTTTCTC
CGCCGTTCGGTATGCGGAATACGTTGACATGGCAAAGAAAACACTATATGCTTTATGCGGAGTGGCAACTTATTGCCCGT
CAGAACCGTGTAGACCGTAATGAGGACCGTACACCGGGGGCTAACCTGTTTCATTTGGGTGGCTCGCTGAATATTCCGGT
TGGCAGGACTAACGAGATAGAAATAACCCTGACCGCCCGTAATATCTTCAATACCAGATATTACAATCATCTTAGTTTTT
ACAGGAAAGTAGAAATTCCGGAACCGGGACGAAACTTCCAATTATTAATCAAAATTCCATTTAAAAAATTACTGTAA

Upstream 100 bases:

>100_bases
CTCCTGCCGCATAATTACATATTCATATTTTCTAGGAAGACAGGTTCATTGTAACTTGTCCTCACATTCATTTTACACAT
TATATAAAAGATTGTAATTG

Downstream 100 bases:

>100_bases
TGAAAACAAAACTTTACCTCCCGATCATCAGCCTTCTGGCAATGTCTGTATTTGCATTTATTTCTTGTGACGATTCGGAT
AGCGATACCACCAAACCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MRIGIISGVIGLFVTLPVHAQKSDSIKSMLLPDVVVTESYQQRQAKKSALTVEVIEQDFLRKHFTGNFMQAVENIPGVQA
MDIGSGFSKPMIRGMGFNRIAVLENGIKQEGQQWGADHGLELDAFNIEAVNVLKGPSSLLYGSDAMGGVIDIASPPIPSA
NMLFGDVTLLGKSVNGTLAGSLMLGLKKNAWYAQIRYSEQHFGDYRIPTDTIVYLTQKMPVYGRKLKNTAGVERNIGLFT
QYQRKGYRADYSISNVYQKTGFFPGAHGVPDASRVEDDGDSRNIELPYSKVNHLKVTTHQQYAWEKLILSGDLGFQNNHR
EEWSAFHTHYGSQPAPEKDPDKELAFDLNTYSASVKARFIGSSSWEHTLGWDRQHQQNDISGYSFLLPEYHRSSTGLLWL
TTYKPNNILSVSGGVRYDYGYIGISPHEDVYLADYLRRQGYDDEQVESYKWNSHAVRKHFGDYSFSLGLVWTPSVQHMVK
VNIGRSFRLPGANELAANGVHHGTFRHEQGDASLKSEQGWQMDASYNLRYHGLSVSVSPFVSWFSNYIFLRPTGEWSVLP
HAGQIYRYTGAEALFAGTEATIDINFLRHFNYRISGEYVYTYNCDEHIPLSFSPPFGMRNTLTWQRKHYMLYAEWQLIAR
QNRVDRNEDRTPGANLFHLGGSLNIPVGRTNEIEITLTARNIFNTRYYNHLSFYRKVEIPEPGRNFQLLIKIPFKKLL

Sequences:

>Translated_718_residues
MRIGIISGVIGLFVTLPVHAQKSDSIKSMLLPDVVVTESYQQRQAKKSALTVEVIEQDFLRKHFTGNFMQAVENIPGVQA
MDIGSGFSKPMIRGMGFNRIAVLENGIKQEGQQWGADHGLELDAFNIEAVNVLKGPSSLLYGSDAMGGVIDIASPPIPSA
NMLFGDVTLLGKSVNGTLAGSLMLGLKKNAWYAQIRYSEQHFGDYRIPTDTIVYLTQKMPVYGRKLKNTAGVERNIGLFT
QYQRKGYRADYSISNVYQKTGFFPGAHGVPDASRVEDDGDSRNIELPYSKVNHLKVTTHQQYAWEKLILSGDLGFQNNHR
EEWSAFHTHYGSQPAPEKDPDKELAFDLNTYSASVKARFIGSSSWEHTLGWDRQHQQNDISGYSFLLPEYHRSSTGLLWL
TTYKPNNILSVSGGVRYDYGYIGISPHEDVYLADYLRRQGYDDEQVESYKWNSHAVRKHFGDYSFSLGLVWTPSVQHMVK
VNIGRSFRLPGANELAANGVHHGTFRHEQGDASLKSEQGWQMDASYNLRYHGLSVSVSPFVSWFSNYIFLRPTGEWSVLP
HAGQIYRYTGAEALFAGTEATIDINFLRHFNYRISGEYVYTYNCDEHIPLSFSPPFGMRNTLTWQRKHYMLYAEWQLIAR
QNRVDRNEDRTPGANLFHLGGSLNIPVGRTNEIEITLTARNIFNTRYYNHLSFYRKVEIPEPGRNFQLLIKIPFKKLL
>Mature_718_residues
MRIGIISGVIGLFVTLPVHAQKSDSIKSMLLPDVVVTESYQQRQAKKSALTVEVIEQDFLRKHFTGNFMQAVENIPGVQA
MDIGSGFSKPMIRGMGFNRIAVLENGIKQEGQQWGADHGLELDAFNIEAVNVLKGPSSLLYGSDAMGGVIDIASPPIPSA
NMLFGDVTLLGKSVNGTLAGSLMLGLKKNAWYAQIRYSEQHFGDYRIPTDTIVYLTQKMPVYGRKLKNTAGVERNIGLFT
QYQRKGYRADYSISNVYQKTGFFPGAHGVPDASRVEDDGDSRNIELPYSKVNHLKVTTHQQYAWEKLILSGDLGFQNNHR
EEWSAFHTHYGSQPAPEKDPDKELAFDLNTYSASVKARFIGSSSWEHTLGWDRQHQQNDISGYSFLLPEYHRSSTGLLWL
TTYKPNNILSVSGGVRYDYGYIGISPHEDVYLADYLRRQGYDDEQVESYKWNSHAVRKHFGDYSFSLGLVWTPSVQHMVK
VNIGRSFRLPGANELAANGVHHGTFRHEQGDASLKSEQGWQMDASYNLRYHGLSVSVSPFVSWFSNYIFLRPTGEWSVLP
HAGQIYRYTGAEALFAGTEATIDINFLRHFNYRISGEYVYTYNCDEHIPLSFSPPFGMRNTLTWQRKHYMLYAEWQLIAR
QNRVDRNEDRTPGANLFHLGGSLNIPVGRTNEIEITLTARNIFNTRYYNHLSFYRKVEIPEPGRNFQLLIKIPFKKLL

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 81478; Mature: 81478

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGIISGVIGLFVTLPVHAQKSDSIKSMLLPDVVVTESYQQRQAKKSALTVEVIEQDFL
CEEEHHHHHHHHHEEECCCCCCCCCHHHHHCCCCEECCCHHHHHHHHHCEEHHHHHHHHH
RKHFTGNFMQAVENIPGVQAMDIGSGFSKPMIRGMGFNRIAVLENGIKQEGQQWGADHGL
HHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCEEEEHHCCHHHHHHHCCCCCCC
ELDAFNIEAVNVLKGPSSLLYGSDAMGGVIDIASPPIPSANMLFGDVTLLGKSVNGTLAG
EEEEEEEEEEEEECCCCCEEECCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCEEEE
SLMLGLKKNAWYAQIRYSEQHFGDYRIPTDTIVYLTQKMPVYGRKLKNTAGVERNIGLFT
EEEEEEECCCEEEEEEECHHHCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCHHH
QYQRKGYRADYSISNVYQKTGFFPGAHGVPDASRVEDDGDSRNIELPYSKVNHLKVTTHQ
HHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEECCHHHCCEEEEEECH
QYAWEKLILSGDLGFQNNHREEWSAFHTHYGSQPAPEKDPDKELAFDLNTYSASVKARFI
HHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
GSSSWEHTLGWDRQHQQNDISGYSFLLPEYHRSSTGLLWLTTYKPNNILSVSGGVRYDYG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEECCCEEEEEE
YIGISPHEDVYLADYLRRQGYDDEQVESYKWNSHAVRKHFGDYSFSLGLVWTPSVQHMVK
EEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCCCEEEE
VNIGRSFRLPGANELAANGVHHGTFRHEQGDASLKSEQGWQMDASYNLRYHGLSVSVSPF
EECCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEHHHH
VSWFSNYIFLRPTGEWSVLPHAGQIYRYTGAEALFAGTEATIDINFLRHFNYRISGEYVY
HHHHCCEEEEEECCCEEECCCCCEEEEEECCCEEEECCCEEEEEEEEEEECEEEECCEEE
TYNCDEHIPLSFSPPFGMRNTLTWQRKHYMLYAEWQLIARQNRVDRNEDRTPGANLFHLG
EECCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEEEEEHHHCCCCCCCCCCCCCCEEEEC
GSLNIPVGRTNEIEITLTARNIFNTRYYNHLSFYRKVEIPEPGRNFQLLIKIPFKKLL
CEEECCCCCCCEEEEEEEECHHHHHHHHHCEEEEEEEECCCCCCCEEEEEECCHHHCC
>Mature Secondary Structure
MRIGIISGVIGLFVTLPVHAQKSDSIKSMLLPDVVVTESYQQRQAKKSALTVEVIEQDFL
CEEEHHHHHHHHHEEECCCCCCCCCHHHHHCCCCEECCCHHHHHHHHHCEEHHHHHHHHH
RKHFTGNFMQAVENIPGVQAMDIGSGFSKPMIRGMGFNRIAVLENGIKQEGQQWGADHGL
HHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCEEEEHHCCHHHHHHHCCCCCCC
ELDAFNIEAVNVLKGPSSLLYGSDAMGGVIDIASPPIPSANMLFGDVTLLGKSVNGTLAG
EEEEEEEEEEEEECCCCCEEECCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCEEEE
SLMLGLKKNAWYAQIRYSEQHFGDYRIPTDTIVYLTQKMPVYGRKLKNTAGVERNIGLFT
EEEEEEECCCEEEEEEECHHHCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCHHH
QYQRKGYRADYSISNVYQKTGFFPGAHGVPDASRVEDDGDSRNIELPYSKVNHLKVTTHQ
HHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEECCHHHCCEEEEEECH
QYAWEKLILSGDLGFQNNHREEWSAFHTHYGSQPAPEKDPDKELAFDLNTYSASVKARFI
HHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
GSSSWEHTLGWDRQHQQNDISGYSFLLPEYHRSSTGLLWLTTYKPNNILSVSGGVRYDYG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEECCCEEEEEE
YIGISPHEDVYLADYLRRQGYDDEQVESYKWNSHAVRKHFGDYSFSLGLVWTPSVQHMVK
EEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCCCEEEE
VNIGRSFRLPGANELAANGVHHGTFRHEQGDASLKSEQGWQMDASYNLRYHGLSVSVSPF
EECCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEHHHH
VSWFSNYIFLRPTGEWSVLPHAGQIYRYTGAEALFAGTEATIDINFLRHFNYRISGEYVY
HHHHCCEEEEEECCCEEECCCCCEEEEEECCCEEEECCCEEEEEEEEEEECEEEECCEEE
TYNCDEHIPLSFSPPFGMRNTLTWQRKHYMLYAEWQLIARQNRVDRNEDRTPGANLFHLG
EECCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEEEEEHHHCCCCCCCCCCCCCCEEEEC
GSLNIPVGRTNEIEITLTARNIFNTRYYNHLSFYRKVEIPEPGRNFQLLIKIPFKKLL
CEEECCCCCCCEEEEEEEECHHHHHHHHHCEEEEEEEECCCCCCCEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]