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The map label for this gene is yedA [H]

Identifier: 29346807

GI number: 29346807

Start: 1724175

End: 1725122

Strand: Reverse

Name: yedA [H]

Synonym: BT_1397

Alternate gene names: 29346807

Gene position: 1725122-1724175 (Counterclockwise)

Preceding gene: 29346808

Following gene: 29346805

Centisome position: 27.56

GC content: 45.36

Gene sequence:

>948_bases
ATGAAAAGTCAGAATCCCTCAAAGAGGAATTTGCCGGGTGTTATCATCGCTTATTTCCTCATTTATGTAGTCTGGGGCTC
CACCTATTTTTTTATAGGGGTGGCTTTGAAAGATTTTTCACCTTTTCTGCTCGGAGCACTGCGGTTTACGACTGCAGGGC
TGATACTTCTTGGAATCTGTTATTTACGGGGAGAACAAATCTTTAAGAAAAGCCTGGTAAAGCGTTCTGCCGTTAGCGGT
ATTGTTCTGTTGTTTGTAGATATGGCTGTCGTTATGCTGGCACAGCGCTATCTGACAAGTAGCCTCGTTGCTATTATAGC
TTCTTCTACGGCACTTTGGATTTTACTTTTGGATGTCCCCATGTGGCGTACTAATTTCCGCAATCCCCTTACGATAGCAG
GCGGAGGGATTGGCTTCGGCGGAGTAGTAATGCTTTATGCGGAGCAGCTCAATGCAGAATGGTTGCATCCGCAAAGTGAG
CGTGGTATCTTGCTCCTTGTTTTCGGATGTATATCCTGGGCTTTGGGAACACTGTATGCCAAGTACCGTTCTTCCCGTGA
GGAAGAAGTGAATGCTTTTGCAGGTTCTGCGTGGCAAATGCTTTTTGCCAGTGTGATGTTCTGGATTTGTGCTGTTGTGA
ACGGAGATGTTCGGGAAGCCGATTTGAGTACAGTTTCGGTCACAAGCTGGTTCTCCTTGCTTTATTTGATTTCTTTTGGT
TCTTTACTGGCATATTCGGCGTATGTCTGGCTCTTGAAAGTACGCCCGGCGGCAGAAGTGGGTACACATGCTTATGTCAA
TCCTTTTATAGCAGTCCTTTTAGGAGTATCTTTTGGAAATGAGCAAGTTACCTTCGTTCAGCTTTCCGGTTTGCTGGTGA
TTCTGCTGGGGGTGATGTTGATTAGCCGGAAACGTAACAAAATGAAATCAACGGCAATATCCCGTTAA

Upstream 100 bases:

>100_bases
TTAAACAGATTGAGGCGGGCATTGAAATAATAAAATAATTGTCAGTTTATTAATAGGTTCCCCTTCTCACTCCCCGTAAA
TACAAATAAAAAGAAGTGAT

Downstream 100 bases:

>100_bases
GCGGAATTGATTCGGCGTCATCCCCACAATCCGTTTGAACATCCGGCTAAGGTGCTGCGGATACTGGAATCCGATTTCGT
AAGCAATTTGGCTCATAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKSQNPSKRNLPGVIIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGICYLRGEQIFKKSLVKRSAVSG
IVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVPMWRTNFRNPLTIAGGGIGFGGVVMLYAEQLNAEWLHPQSE
RGILLLVFGCISWALGTLYAKYRSSREEEVNAFAGSAWQMLFASVMFWICAVVNGDVREADLSTVSVTSWFSLLYLISFG
SLLAYSAYVWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVMLISRKRNKMKSTAISR

Sequences:

>Translated_315_residues
MKSQNPSKRNLPGVIIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGICYLRGEQIFKKSLVKRSAVSG
IVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVPMWRTNFRNPLTIAGGGIGFGGVVMLYAEQLNAEWLHPQSE
RGILLLVFGCISWALGTLYAKYRSSREEEVNAFAGSAWQMLFASVMFWICAVVNGDVREADLSTVSVTSWFSLLYLISFG
SLLAYSAYVWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVMLISRKRNKMKSTAISR
>Mature_315_residues
MKSQNPSKRNLPGVIIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGICYLRGEQIFKKSLVKRSAVSG
IVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVPMWRTNFRNPLTIAGGGIGFGGVVMLYAEQLNAEWLHPQSE
RGILLLVFGCISWALGTLYAKYRSSREEEVNAFAGSAWQMLFASVMFWICAVVNGDVREADLSTVSVTSWFSLLYLISFG
SLLAYSAYVWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVMLISRKRNKMKSTAISR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=290, Percent_Identity=30.6896551724138, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082351, Length=313, Percent_Identity=23.961661341853, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34786; Mature: 34786

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQNPSKRNLPGVIIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGIC
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YLRGEQIFKKSLVKRSAVSGIVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCC
MWRTNFRNPLTIAGGGIGFGGVVMLYAEQLNAEWLHPQSERGILLLVFGCISWALGTLYA
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
KYRSSREEEVNAFAGSAWQMLFASVMFWICAVVNGDVREADLSTVSVTSWFSLLYLISFG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
SLLAYSAYVWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVML
HHHHHHHHHHHHEECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHH
ISRKRNKMKSTAISR
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSQNPSKRNLPGVIIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGIC
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YLRGEQIFKKSLVKRSAVSGIVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCC
MWRTNFRNPLTIAGGGIGFGGVVMLYAEQLNAEWLHPQSERGILLLVFGCISWALGTLYA
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
KYRSSREEEVNAFAGSAWQMLFASVMFWICAVVNGDVREADLSTVSVTSWFSLLYLISFG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
SLLAYSAYVWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVML
HHHHHHHHHHHHEECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHH
ISRKRNKMKSTAISR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]