| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346805
Identifier: 29346805
GI number: 29346805
Start: 1722059
End: 1723102
Strand: Reverse
Name: 29346805
Synonym: BT_1395
Alternate gene names: NA
Gene position: 1723102-1722059 (Counterclockwise)
Preceding gene: 29346807
Following gene: 29346804
Centisome position: 27.52
GC content: 49.81
Gene sequence:
>1044_bases ATGAAAAAGATTCTATTAATTCCATTGATGATGCTGACGATGATGCCGATGGCGGCTTGCGACGGCTCAAACGCTGATCC GATTCTTCCGGAACAGCCGGGACAACCGGGAAATTCCGACGGTGGAGACGAGGACGATTCTACAAACCCGACAAACCCCA TTCCGGGCGGTAACGGGCGATATCTGGTACTTTACTGTTCGCGCACCGGCAGCACGGAGCGTATGGCGCAACAGATTCAG CAAACACTCGATTGCGATATCCTGGAAGTGGAACCGCAAACACCTTATGAAAGCGATTATAATGGGATGCTCAACCGTGC ACAGGAAGAACTGGCTGCTATCCGTCAGGGGAATTATCCGGCGATTAAAACTTCGGTTGAAGATTTCGGCAACTATGATA TCGTGTTTGTCGGCTATCCGATTTGGTACGGTAGCATGGCCACACCGATGCAGACATTCCTGCATAATCATGCTTCGAAA CTTGCAGGTAAGCGTATCGCTCTTTTTGCCAGCAGTGGCAGCAGCGGCATCTCTGCATCAGTTGACGAGGCGCGGACACT TTGCTCCGGTGCCACTTTCACCGAAACATTGCTTCTGACTTCTTCGACACTTTCGCAGATGGGAAACCGGATACGGACAT GGCTCGAAACACTCGGTGCGAGTCGGGAAAACAATTATCCGTCTACTTCTACGAATGTGAAGATTACAGTCGGTAACCGT ACCATTACTGCTACGATGGAAGACAATGCCGCGGCGCAGGACTTTCTTTCACGTCTGCCGCTTGAAGTGACGCTGAATGA TTATAATAATATCACAGAGAAAATTTTCTATCCGTCGCCTGCACTGACTACGGCAGGAGTGCCCCGTGGCTGTGCACCTG TGCCCGGTGATATTACAATCTATGTGCCGTGGAATAATGTGGCGATCTTCTGTAAAAGCGGGTCGCAAAGCAATGACTTG ATAAAGATTGGGCGCATTGACGGTAACGGAATAGATGCATTGAACGTTCCGGGCAATGTGGCAGTGAAATTCGAACGACA ATAA
Upstream 100 bases:
>100_bases CATGATTGGGGTATAAATATCCGTAAATCGTCTACATCCGGGCTGGACCATTCCCCGTAACTTTGTAACCGGTAATTTAA CATTGAAAAGAGATAGTAAT
Downstream 100 bases:
>100_bases ATTAGCAAAATGAAGAAGTTACTGATTATTTTTCTATTGTTTGCAGCAACCGCTTCGGCAAACGTAATCAGACCGGTCGA ACCATCCGCCGCCGAGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Lipoprotein; Flavodoxin Family Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKKILLIPLMMLTMMPMAACDGSNADPILPEQPGQPGNSDGGDEDDSTNPTNPIPGGNGRYLVLYCSRTGSTERMAQQIQ QTLDCDILEVEPQTPYESDYNGMLNRAQEELAAIRQGNYPAIKTSVEDFGNYDIVFVGYPIWYGSMATPMQTFLHNHASK LAGKRIALFASSGSSGISASVDEARTLCSGATFTETLLLTSSTLSQMGNRIRTWLETLGASRENNYPSTSTNVKITVGNR TITATMEDNAAAQDFLSRLPLEVTLNDYNNITEKIFYPSPALTTAGVPRGCAPVPGDITIYVPWNNVAIFCKSGSQSNDL IKIGRIDGNGIDALNVPGNVAVKFERQ
Sequences:
>Translated_347_residues MKKILLIPLMMLTMMPMAACDGSNADPILPEQPGQPGNSDGGDEDDSTNPTNPIPGGNGRYLVLYCSRTGSTERMAQQIQ QTLDCDILEVEPQTPYESDYNGMLNRAQEELAAIRQGNYPAIKTSVEDFGNYDIVFVGYPIWYGSMATPMQTFLHNHASK LAGKRIALFASSGSSGISASVDEARTLCSGATFTETLLLTSSTLSQMGNRIRTWLETLGASRENNYPSTSTNVKITVGNR TITATMEDNAAAQDFLSRLPLEVTLNDYNNITEKIFYPSPALTTAGVPRGCAPVPGDITIYVPWNNVAIFCKSGSQSNDL IKIGRIDGNGIDALNVPGNVAVKFERQ >Mature_347_residues MKKILLIPLMMLTMMPMAACDGSNADPILPEQPGQPGNSDGGDEDDSTNPTNPIPGGNGRYLVLYCSRTGSTERMAQQIQ QTLDCDILEVEPQTPYESDYNGMLNRAQEELAAIRQGNYPAIKTSVEDFGNYDIVFVGYPIWYGSMATPMQTFLHNHASK LAGKRIALFASSGSSGISASVDEARTLCSGATFTETLLLTSSTLSQMGNRIRTWLETLGASRENNYPSTSTNVKITVGNR TITATMEDNAAAQDFLSRLPLEVTLNDYNNITEKIFYPSPALTTAGVPRGCAPVPGDITIYVPWNNVAIFCKSGSQSNDL IKIGRIDGNGIDALNVPGNVAVKFERQ
Specific function: Unknown
COG id: COG4925
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37541; Mature: 37541
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLIPLMMLTMMPMAACDGSNADPILPEQPGQPGNSDGGDEDDSTNPTNPIPGGNGR CCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YLVLYCSRTGSTERMAQQIQQTLDCDILEVEPQTPYESDYNGMLNRAQEELAAIRQGNYP EEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC AIKTSVEDFGNYDIVFVGYPIWYGSMATPMQTFLHNHASKLAGKRIALFASSGSSGISAS EEECCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC VDEARTLCSGATFTETLLLTSSTLSQMGNRIRTWLETLGASRENNYPSTSTNVKITVGNR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCE TITATMEDNAAAQDFLSRLPLEVTLNDYNNITEKIFYPSPALTTAGVPRGCAPVPGDITI EEEEEECCCHHHHHHHHHCCEEEEECCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCEEE YVPWNNVAIFCKSGSQSNDLIKIGRIDGNGIDALNVPGNVAVKFERQ EEECCCEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEECC >Mature Secondary Structure MKKILLIPLMMLTMMPMAACDGSNADPILPEQPGQPGNSDGGDEDDSTNPTNPIPGGNGR CCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YLVLYCSRTGSTERMAQQIQQTLDCDILEVEPQTPYESDYNGMLNRAQEELAAIRQGNYP EEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC AIKTSVEDFGNYDIVFVGYPIWYGSMATPMQTFLHNHASKLAGKRIALFASSGSSGISAS EEECCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC VDEARTLCSGATFTETLLLTSSTLSQMGNRIRTWLETLGASRENNYPSTSTNVKITVGNR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCE TITATMEDNAAAQDFLSRLPLEVTLNDYNNITEKIFYPSPALTTAGVPRGCAPVPGDITI EEEEEECCCHHHHHHHHHCCEEEEECCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCEEE YVPWNNVAIFCKSGSQSNDLIKIGRIDGNGIDALNVPGNVAVKFERQ EEECCCEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA