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The map label for this gene is recN [H]

Identifier: 29346771

GI number: 29346771

Start: 1688236

End: 1689903

Strand: Reverse

Name: recN [H]

Synonym: BT_1361

Alternate gene names: 29346771

Gene position: 1689903-1688236 (Counterclockwise)

Preceding gene: 29346772

Following gene: 29346770

Centisome position: 26.99

GC content: 50.72

Gene sequence:

>1668_bases
GTGTTACGTTCACTTTATATTCAGAATTACGCATTGATAGAAAAACTGGATATCGGTTTTGAAACAGGCTTCTCGGTCAT
CACAGGCGAGACGGGGGCCGGAAAATCGATTATTCTGGGAGCCATCGGTCTGCTGCTCGGACAGCGTGCCGATGTGAAAG
CGATTCGTCGTGGAGCTTCTAAATGTATTATCGAAGCACGTTTTGATATCTCGGCTTACGGTATGCGCCCGTTTTTTGAA
GAGAACGAACTGGAATACGACGACGAGGAATGTATCCTGCGGCGCGAAGTGCAGGCGTCCGGCAAAAGCCGCGCATTCAT
TAATGATACGCCTGCTTCGCTGGCACAGGTGAAGGAATTGGGCGAACAACTGATCGATGTACATTCGCAGCATCAGAATC
TTTTGCTCAATAAAGAAGGTTTCCAACTGAATGTACTCGATATTCTGGCTCATAACGATGATGCGCTGGAGAAGTATCAT
TTACTGTATAATGAATGGAAGCTGCTCGACCGTGAATTGTCCGAGCTGACGGCACTTGCCGAGCAAAGCCGGACGGATGA
GGACTATCTTCGTTTCCAGCTGGAACAACTGGAGGAAGCTCATCTGGTGGAAGGGGAGCAGAGCGAACTGGAGCAGGAGG
CGGAAACTCTGAGTCATGCCGAGGAGATCAAAGCGGGGCTTTACCGCATCGAACAGTCTTTTTTCTCGGACGAAGGCGGA
CTGCTTTCTTTCCTGAAAGATAATCTGAATACGCTGAATAATCTGAGAAAGGTGTATCAGCCTGCCGGAGAACTGAGCGA
CCGCATGGAAAGTGCCTACATCGAACTGAAAGATATTTCGCAGGAAGTCTCAGCGCAGGGAGAATCCATCGAGTTTAATC
CTACCCGTCTGGACGAAGTGAACGATCGTCTGAATCTGATTTACTCCCTGCAACAGAAGCATCGGGTACAGACACTTGAA
GAATTGATGGCCTTGGCAGACCAATATCGCAGTAAGTTGTCCGAGATCACCTCTTATGATGATCGCATAGCCGAACTGAC
TGCCCGCAAGGAAGCCCAGTATGAACGGGTGAAGAAGCAAGCCACCGTGCTGACAAAAGCCCGTGCGGCAGCCGCCCGTG
AAGTGGAGAAACAACTGGCTGAACGGCTGGTCCCGCTGGGTATGCCCAACGTCCGCTTCCAAGTGGAAATGGGATTGAAG
AAAGAACCGGGCATACAGGGGGAGGATACTGTCAACTTCCTGTTCTCCGCCAACAAGAACGGAACGTTGCAAAGCATATC
TTCCGTTGCTTCTGGAGGTGAAATTGCGCGTGTGATGCTTTCTATCAAAGCGATGATCGCCGGTGCGGTGAAACTGCCTA
CGATTGTATTTGATGAGATCGATACCGGAGTTTCCGGTGAAATAGCCGACCGTATGGCGGATATGATGCAGGAAATGGGT
GACTGCAACCGTCAGGTGATCAGTATCACACATCTGCCTCAGATCGCAGCTCGCGGGCGCGCTCATTATAAAGTATATAA
GAAGGACAGCGATACGGAAACGAACAGCCATATCCGCCGTCTCACCGATGAAGAACGGGTAGAGGAGATCGCTCACATGC
TGAGCGGAGCCACATTGACCGAGGCTGCCCTCAGCAATGCGAAGGCCCTGTTGGCCCGTACTTCATAA

Upstream 100 bases:

>100_bases
AAGCCCAAACAGGAAGTAGCGCAAGACATCATCAACCATCTGGTTGCCGTTTTGACTCACTGATCTTTATTTTTTAGGTT
TAATTTTTAATTTACAGAAG

Downstream 100 bases:

>100_bases
TCCATAATTCAAAATTTATAATTCAAAATTACAATGACCGATAAAAGTGAAATGATTTTCGGCGTCCGTGCCGTCATAGA
GGCCATTCAGGCTGGAAAAG

Product: recombination protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLRSLYIQNYALIEKLDIGFETGFSVITGETGAGKSIILGAIGLLLGQRADVKAIRRGASKCIIEARFDISAYGMRPFFE
ENELEYDDEECILRREVQASGKSRAFINDTPASLAQVKELGEQLIDVHSQHQNLLLNKEGFQLNVLDILAHNDDALEKYH
LLYNEWKLLDRELSELTALAEQSRTDEDYLRFQLEQLEEAHLVEGEQSELEQEAETLSHAEEIKAGLYRIEQSFFSDEGG
LLSFLKDNLNTLNNLRKVYQPAGELSDRMESAYIELKDISQEVSAQGESIEFNPTRLDEVNDRLNLIYSLQQKHRVQTLE
ELMALADQYRSKLSEITSYDDRIAELTARKEAQYERVKKQATVLTKARAAAAREVEKQLAERLVPLGMPNVRFQVEMGLK
KEPGIQGEDTVNFLFSANKNGTLQSISSVASGGEIARVMLSIKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADMMQEMG
DCNRQVISITHLPQIAARGRAHYKVYKKDSDTETNSHIRRLTDEERVEEIAHMLSGATLTEAALSNAKALLARTS

Sequences:

>Translated_555_residues
MLRSLYIQNYALIEKLDIGFETGFSVITGETGAGKSIILGAIGLLLGQRADVKAIRRGASKCIIEARFDISAYGMRPFFE
ENELEYDDEECILRREVQASGKSRAFINDTPASLAQVKELGEQLIDVHSQHQNLLLNKEGFQLNVLDILAHNDDALEKYH
LLYNEWKLLDRELSELTALAEQSRTDEDYLRFQLEQLEEAHLVEGEQSELEQEAETLSHAEEIKAGLYRIEQSFFSDEGG
LLSFLKDNLNTLNNLRKVYQPAGELSDRMESAYIELKDISQEVSAQGESIEFNPTRLDEVNDRLNLIYSLQQKHRVQTLE
ELMALADQYRSKLSEITSYDDRIAELTARKEAQYERVKKQATVLTKARAAAAREVEKQLAERLVPLGMPNVRFQVEMGLK
KEPGIQGEDTVNFLFSANKNGTLQSISSVASGGEIARVMLSIKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADMMQEMG
DCNRQVISITHLPQIAARGRAHYKVYKKDSDTETNSHIRRLTDEERVEEIAHMLSGATLTEAALSNAKALLARTS
>Mature_555_residues
MLRSLYIQNYALIEKLDIGFETGFSVITGETGAGKSIILGAIGLLLGQRADVKAIRRGASKCIIEARFDISAYGMRPFFE
ENELEYDDEECILRREVQASGKSRAFINDTPASLAQVKELGEQLIDVHSQHQNLLLNKEGFQLNVLDILAHNDDALEKYH
LLYNEWKLLDRELSELTALAEQSRTDEDYLRFQLEQLEEAHLVEGEQSELEQEAETLSHAEEIKAGLYRIEQSFFSDEGG
LLSFLKDNLNTLNNLRKVYQPAGELSDRMESAYIELKDISQEVSAQGESIEFNPTRLDEVNDRLNLIYSLQQKHRVQTLE
ELMALADQYRSKLSEITSYDDRIAELTARKEAQYERVKKQATVLTKARAAAAREVEKQLAERLVPLGMPNVRFQVEMGLK
KEPGIQGEDTVNFLFSANKNGTLQSISSVASGGEIARVMLSIKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADMMQEMG
DCNRQVISITHLPQIAARGRAHYKVYKKDSDTETNSHIRRLTDEERVEEIAHMLSGATLTEAALSNAKALLARTS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=570, Percent_Identity=32.1052631578947, Blast_Score=286, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62341; Mature: 62341

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSLYIQNYALIEKLDIGFETGFSVITGETGAGKSIILGAIGLLLGQRADVKAIRRGAS
CCCHHHHHHHHHHHHHHCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHH
KCIIEARFDISAYGMRPFFEENELEYDDEECILRREVQASGKSRAFINDTPASLAQVKEL
HEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
GEQLIDVHSQHQNLLLNKEGFQLNVLDILAHNDDALEKYHLLYNEWKLLDRELSELTALA
HHHHHHHHHHHHHEEECCCCCEEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSRTDEDYLRFQLEQLEEAHLVEGEQSELEQEAETLSHAEEIKAGLYRIEQSFFSDEGG
HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LLSFLKDNLNTLNNLRKVYQPAGELSDRMESAYIELKDISQEVSAQGESIEFNPTRLDEV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
NDRLNLIYSLQQKHRVQTLEELMALADQYRSKLSEITSYDDRIAELTARKEAQYERVKKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVLTKARAAAAREVEKQLAERLVPLGMPNVRFQVEMGLKKEPGIQGEDTVNFLFSANKN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC
GTLQSISSVASGGEIARVMLSIKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADMMQEMG
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHC
DCNRQVISITHLPQIAARGRAHYKVYKKDSDTETNSHIRRLTDEERVEEIAHMLSGATLT
CCCHHEEEHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHH
EAALSNAKALLARTS
HHHHHHHHHHHEECC
>Mature Secondary Structure
MLRSLYIQNYALIEKLDIGFETGFSVITGETGAGKSIILGAIGLLLGQRADVKAIRRGAS
CCCHHHHHHHHHHHHHHCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHH
KCIIEARFDISAYGMRPFFEENELEYDDEECILRREVQASGKSRAFINDTPASLAQVKEL
HEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
GEQLIDVHSQHQNLLLNKEGFQLNVLDILAHNDDALEKYHLLYNEWKLLDRELSELTALA
HHHHHHHHHHHHHEEECCCCCEEEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSRTDEDYLRFQLEQLEEAHLVEGEQSELEQEAETLSHAEEIKAGLYRIEQSFFSDEGG
HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LLSFLKDNLNTLNNLRKVYQPAGELSDRMESAYIELKDISQEVSAQGESIEFNPTRLDEV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
NDRLNLIYSLQQKHRVQTLEELMALADQYRSKLSEITSYDDRIAELTARKEAQYERVKKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVLTKARAAAAREVEKQLAERLVPLGMPNVRFQVEMGLKKEPGIQGEDTVNFLFSANKN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC
GTLQSISSVASGGEIARVMLSIKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADMMQEMG
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHC
DCNRQVISITHLPQIAARGRAHYKVYKKDSDTETNSHIRRLTDEERVEEIAHMLSGATLT
CCCHHEEEHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHH
EAALSNAKALLARTS
HHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA