| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yhaI [C]
Identifier: 29346747
GI number: 29346747
Start: 1662251
End: 1662724
Strand: Reverse
Name: yhaI [C]
Synonym: BT_1337
Alternate gene names: 29346747
Gene position: 1662724-1662251 (Counterclockwise)
Preceding gene: 29346748
Following gene: 29346746
Centisome position: 26.56
GC content: 46.41
Gene sequence:
>474_bases ATGTTCAAAGCTCCTTTTTCTTTTGACGGTCGTATTCGTAGGATCGAATATTTCCTGTCTGGTATTATCGGTGGTATCGT TTTTGGTGTTGCCTATTCTCTCGGTTTAGCTACTTTGTTTCTTGGTGCGGCTGCCGGTTCCGCGGGTGGTTCCCTGTTTG GTATCTTGATTGGTATCGTAGCGGGAATAGCCTCTATATGGTTCTCTTTGGCGCAGGGCGTGAAGCGGTTGCATGACTTG AACAAGTCCGGTTGGTTGATACTCATTTGCTGTGTTCCTATCATCGGGTGGGTATTCAGTCTCTACATGTTGTTTGCCGA TGGTACGGTAGGTCCTAATCAGTATGGTGAAGATCCGAAGAACCGTATGCCATATCAGCCGCAGCCAACTTCTGTAAATG TAACAGTGAATGTGTCGAGAGAAACTCCTGCTGAAGCACCTGCCGAAGAAGAAAAAACAGAAAAAGCCGAATAG
Upstream 100 bases:
>100_bases TTTTTTGACATAAAAGCTTTCTTTATTTAATTTATTTTATATCTTTGCTAGCATATCAAGATTACAATCAACTATTTATT CACATAAACTTAATAAAATT
Downstream 100 bases:
>100_bases TCTTTAATAAGCAGAAATATGGTTGCCTCTTGCAAAATTCGTTTTGCGAGAGGCATTTTTTTACTACCTTTGAGGATTGG TAAACAGAAAAAAAGAAGAT
Product: putative aminopeptidase C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFKAPFSFDGRIRRIEYFLSGIIGGIVFGVAYSLGLATLFLGAAAGSAGGSLFGILIGIVAGIASIWFSLAQGVKRLHDL NKSGWLILICCVPIIGWVFSLYMLFADGTVGPNQYGEDPKNRMPYQPQPTSVNVTVNVSRETPAEAPAEEEKTEKAE
Sequences:
>Translated_157_residues MFKAPFSFDGRIRRIEYFLSGIIGGIVFGVAYSLGLATLFLGAAAGSAGGSLFGILIGIVAGIASIWFSLAQGVKRLHDL NKSGWLILICCVPIIGWVFSLYMLFADGTVGPNQYGEDPKNRMPYQPQPTSVNVTVNVSRETPAEAPAEEEKTEKAE >Mature_157_residues MFKAPFSFDGRIRRIEYFLSGIIGGIVFGVAYSLGLATLFLGAAAGSAGGSLFGILIGIVAGIASIWFSLAQGVKRLHDL NKSGWLILICCVPIIGWVFSLYMLFADGTVGPNQYGEDPKNRMPYQPQPTSVNVTVNVSRETPAEAPAEEEKTEKAE
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16861; Mature: 16861
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00334 MYB_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKAPFSFDGRIRRIEYFLSGIIGGIVFGVAYSLGLATLFLGAAAGSAGGSLFGILIGIV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AGIASIWFSLAQGVKRLHDLNKSGWLILICCVPIIGWVFSLYMLFADGTVGPNQYGEDPK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NRMPYQPQPTSVNVTVNVSRETPAEAPAEEEKTEKAE CCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MFKAPFSFDGRIRRIEYFLSGIIGGIVFGVAYSLGLATLFLGAAAGSAGGSLFGILIGIV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AGIASIWFSLAQGVKRLHDLNKSGWLILICCVPIIGWVFSLYMLFADGTVGPNQYGEDPK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NRMPYQPQPTSVNVTVNVSRETPAEAPAEEEKTEKAE CCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA