| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yqgH [H]
Identifier: 29346733
GI number: 29346733
Start: 1647911
End: 1649107
Strand: Reverse
Name: yqgH [H]
Synonym: BT_1323
Alternate gene names: 29346733
Gene position: 1649107-1647911 (Counterclockwise)
Preceding gene: 29346738
Following gene: 29346732
Centisome position: 26.34
GC content: 47.37
Gene sequence:
>1197_bases ATGAAGAAGATTTTTGAGAAGATAATAGAAGGAATTTTGACTTGTAGCGGTTTCGTAACAAGTATTACTATCCTGCTGAT CGTACTTTTCCTGTTTACAGAGGCTTTCGGGCTGTTCAATAGTAAAGTGATTGAAGAAGGGTATGTGTTGGCTTTGAACA AAAGTAATCGGGTAAATACGCTGAGTCCTGCTCAGATAAAGGATGTTTTCGACGAGGAGATAACAAACTGGAAAGAACTC GGTGGGGAGGATCTCCCCATCCGGGTTTTTCGTTTGGAAGACATCACGGAGTATTATACAGAGGAAGAACTCGGACCCGC TTATGAGTATGCCGGTGAAAGAATCATGCAACTGGTGGAGAAGACGCCCGGCATTGTAGCTTTTGTCCCGCAGAAATTTA TAGTGCAGCCTGATACGGTGCATTTTATCAAGGACAATACTATTTCGGTAAAAGATGTCTTTGCAGGTGCCGAGTGGTTC CCGACAGCTACTCCTGCTCCATTATTCGGATTTCTGCCGTTGATTGCGGGTACCTTATGGGTAAGTCTGTTCGCTATCCT CTTTGCGCTTCCGTTCGGACTTTCGGTATCTATCTATATGTCTGAGGTCGCCAATCCGAAGGTGCGCAACTGGCTGAAAC CGATCATTGAACTGTTGAGTGGTATTCCTTCGGTGGTTTACGGCTTTTTCGGTTTGATTGTCGTTGTCCCCCTGATTCAG AAATTCTTTGATCTGCCGGTAGGGGAGAGCGGTTTGGCAGGAAGTATCATTCTGGCTATCATGGCGCTGCCTACTATTAT AACAGTTACCGAAGATGCTATGCGGAACTGTCCGCGTTCGATGCGGGAAGCGAGTCTGGCTTTGGGAGCTTCGCAGTGGC AGACTATATATAAGGTAGTGATTCCCTATTCGATCTCCGGAATTACTTCCGGCGTAGTGCTGGGCATCGGGCGGGCTATC GGAGAGACGATGGCAGTGCTGATGGTGACGGGTAATGCCGCAGTGATACCGACAACGATTCTCGAACCGCTCCGGACCAT TCCGGCAACGATTGCAGCGGAACTGGGAGAAGCTCCGGCAGGCGGACCACATTACGAAGCGTTGTTCCTGTTGGGCGTCG TACTGTTCTTTATTACATTAATCATCAACTTTAGCGTGGAGTATATCTCTTCTAAAGGAATAAAACGTAGCAAGTAA
Upstream 100 bases:
>100_bases TTTGTAACACAAATGTAACATCATTGAAATACTTCCTTCAAACGTTAGTCACACCTCCTTAATAAGGAGTCGCTTTCTTT GCATCAGAAAACCAATAGGT
Downstream 100 bases:
>100_bases CATGGAAATACGAAGTAATAATAAAGCGAAACACCGTTCGCAGAAACTGGCATTCGGAATTTTCCGGTTGTTGAGTCTCT GTATTGTGCTGATTTTGTTT
Product: putative ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKKIFEKIIEGILTCSGFVTSITILLIVLFLFTEAFGLFNSKVIEEGYVLALNKSNRVNTLSPAQIKDVFDEEITNWKEL GGEDLPIRVFRLEDITEYYTEEELGPAYEYAGERIMQLVEKTPGIVAFVPQKFIVQPDTVHFIKDNTISVKDVFAGAEWF PTATPAPLFGFLPLIAGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVVVPLIQ KFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAI GETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLIINFSVEYISSKGIKRSK
Sequences:
>Translated_398_residues MKKIFEKIIEGILTCSGFVTSITILLIVLFLFTEAFGLFNSKVIEEGYVLALNKSNRVNTLSPAQIKDVFDEEITNWKEL GGEDLPIRVFRLEDITEYYTEEELGPAYEYAGERIMQLVEKTPGIVAFVPQKFIVQPDTVHFIKDNTISVKDVFAGAEWF PTATPAPLFGFLPLIAGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVVVPLIQ KFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAI GETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLIINFSVEYISSKGIKRSK >Mature_398_residues MKKIFEKIIEGILTCSGFVTSITILLIVLFLFTEAFGLFNSKVIEEGYVLALNKSNRVNTLSPAQIKDVFDEEITNWKEL GGEDLPIRVFRLEDITEYYTEEELGPAYEYAGERIMQLVEKTPGIVAFVPQKFIVQPDTVHFIKDNTISVKDVFAGAEWF PTATPAPLFGFLPLIAGTLWVSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVVVPLIQ KFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIYKVVIPYSISGITSGVVLGIGRAI GETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPAGGPHYEALFLLGVVLFFITLIINFSVEYISSKGIKRSK
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=245, Percent_Identity=35.9183673469388, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1790163, Length=186, Percent_Identity=32.7956989247312, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 43508; Mature: 43508
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFEKIIEGILTCSGFVTSITILLIVLFLFTEAFGLFNSKVIEEGYVLALNKSNRVNT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC LSPAQIKDVFDEEITNWKELGGEDLPIRVFRLEDITEYYTEEELGPAYEYAGERIMQLVE CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KTPGIVAFVPQKFIVQPDTVHFIKDNTISVKDVFAGAEWFPTATPAPLFGFLPLIAGTLW HCCCEEEECCHHHEECCCCEEEEECCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH VSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVVVPLIQ HHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIYKVV HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCHHHHHHHHHHH IPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPA HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GGPHYEALFLLGVVLFFITLIINFSVEYISSKGIKRSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKIFEKIIEGILTCSGFVTSITILLIVLFLFTEAFGLFNSKVIEEGYVLALNKSNRVNT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC LSPAQIKDVFDEEITNWKELGGEDLPIRVFRLEDITEYYTEEELGPAYEYAGERIMQLVE CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KTPGIVAFVPQKFIVQPDTVHFIKDNTISVKDVFAGAEWFPTATPAPLFGFLPLIAGTLW HCCCEEEECCHHHEECCCCEEEEECCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH VSLFAILFALPFGLSVSIYMSEVANPKVRNWLKPIIELLSGIPSVVYGFFGLIVVVPLIQ HHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KFFDLPVGESGLAGSIILAIMALPTIITVTEDAMRNCPRSMREASLALGASQWQTIYKVV HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCHHHHHHHHHHH IPYSISGITSGVVLGIGRAIGETMAVLMVTGNAAVIPTTILEPLRTIPATIAAELGEAPA HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GGPHYEALFLLGVVLFFITLIINFSVEYISSKGIKRSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]