| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346738
Identifier: 29346738
GI number: 29346738
Start: 1654307
End: 1655191
Strand: Reverse
Name: 29346738
Synonym: BT_1328
Alternate gene names: NA
Gene position: 1655191-1654307 (Counterclockwise)
Preceding gene: 29346739
Following gene: 29346733
Centisome position: 26.44
GC content: 43.28
Gene sequence:
>885_bases ATGGACAAAATTCGATTTTTCTTCATCGCCCTGTTAGGCATGGGCGCTGCCCACTTGTCGGCTCAAACCGCCGATAGTAC AAAAACTTCTTCCTGGACAACGGAAGGTTTTGCCGGACTCAAACTGACGCAAGTAAGCCTGACCAACTGGTCTGCCGGAG GTGATAACTCCGTCGCTTTTGACTTGCAAGGTACTTATCAAGCTAATTATAAAAAAGGGAAGCATATATGGAATAACCGC CTTGAACTGGCTTATGGATTGAATAAGACAGGGGAAGACGGCATGAGAAAAGCCAATGATAAAATATATTTGAATACCAA CTATGGTTATTCTATCGCGAAAAACTGGTATGCGAGTGCATTTGCCACTTTTCAGACACAATTCTCACCCGGATATGACT ATTCTGTCAATAAGGATGTCGCTATCTCCGAATTTATGTCACCGGGCTATTTGACCACCGGTCTGGGATTTACGTATGAT CCGGGAAAGATTTTCACGGTTGTATTGTCTCCTGCTTCCTGGCGCGGAACCTTTGTTCTGAATGACCGTTTGTCTGATGA AGGTGCCTTTGGAGTAGATCCCGGCAAGCATCTGTTGTCGAGCTTCGGTGCTAATCTGAAAGGGGAGGTGAAATATGAAT TCTTGAAGAATATGACTGTATACTCCCGTCTGGACCTGTATTCTGATTATTTGCATAAACCTCAGAATATCGATGTCAAC TGGGAAATACAGATAAATATGGCAATTAATAAATGGTTCTCCACCACGCTGACCACTAATATGGTATATGACGATGATAT CAAGATCGTTCAAAAAGACGGCAGTAAGGGATCTCGCCTGCAATTCAAAGAGGTGTTAGGCGTGGGAGTGCAATTTAATT TCTAA
Upstream 100 bases:
>100_bases ATTCCATGCGGTTGGTACCAATAGTACAATAAGCGGCTTCGATTAATACTTAATACTTATTACTTAATACCTAATTACTT TTTTCCTAAACCTCAACCAC
Downstream 100 bases:
>100_bases TTTAGGTATTAAGTATTAAGTATTAAGTATTAGGTATTAAGTATTAGGTATTAAGCCATGCGGATAAGCTCATAAACAGC AACTTCGGTTAATACTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MDKIRFFFIALLGMGAAHLSAQTADSTKTSSWTTEGFAGLKLTQVSLTNWSAGGDNSVAFDLQGTYQANYKKGKHIWNNR LELAYGLNKTGEDGMRKANDKIYLNTNYGYSIAKNWYASAFATFQTQFSPGYDYSVNKDVAISEFMSPGYLTTGLGFTYD PGKIFTVVLSPASWRGTFVLNDRLSDEGAFGVDPGKHLLSSFGANLKGEVKYEFLKNMTVYSRLDLYSDYLHKPQNIDVN WEIQINMAINKWFSTTLTTNMVYDDDIKIVQKDGSKGSRLQFKEVLGVGVQFNF
Sequences:
>Translated_294_residues MDKIRFFFIALLGMGAAHLSAQTADSTKTSSWTTEGFAGLKLTQVSLTNWSAGGDNSVAFDLQGTYQANYKKGKHIWNNR LELAYGLNKTGEDGMRKANDKIYLNTNYGYSIAKNWYASAFATFQTQFSPGYDYSVNKDVAISEFMSPGYLTTGLGFTYD PGKIFTVVLSPASWRGTFVLNDRLSDEGAFGVDPGKHLLSSFGANLKGEVKYEFLKNMTVYSRLDLYSDYLHKPQNIDVN WEIQINMAINKWFSTTLTTNMVYDDDIKIVQKDGSKGSRLQFKEVLGVGVQFNF >Mature_294_residues MDKIRFFFIALLGMGAAHLSAQTADSTKTSSWTTEGFAGLKLTQVSLTNWSAGGDNSVAFDLQGTYQANYKKGKHIWNNR LELAYGLNKTGEDGMRKANDKIYLNTNYGYSIAKNWYASAFATFQTQFSPGYDYSVNKDVAISEFMSPGYLTTGLGFTYD PGKIFTVVLSPASWRGTFVLNDRLSDEGAFGVDPGKHLLSSFGANLKGEVKYEFLKNMTVYSRLDLYSDYLHKPQNIDVN WEIQINMAINKWFSTTLTTNMVYDDDIKIVQKDGSKGSRLQFKEVLGVGVQFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32920; Mature: 32920
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIRFFFIALLGMGAAHLSAQTADSTKTSSWTTEGFAGLKLTQVSLTNWSAGGDNSVAF CCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE DLQGTYQANYKKGKHIWNNRLELAYGLNKTGEDGMRKANDKIYLNTNYGYSIAKNWYASA EEECCEECCCCCCCHHHCCCEEEEECCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHH FATFQTQFSPGYDYSVNKDVAISEFMSPGYLTTGLGFTYDPGKIFTVVLSPASWRGTFVL EEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEECCCEEECCCEEEEEEECCCCCCEEEEE NDRLSDEGAFGVDPGKHLLSSFGANLKGEVKYEFLKNMTVYSRLDLYSDYLHKPQNIDVN CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHHHHHHCCCCCCCEE WEIQINMAINKWFSTTLTTNMVYDDDIKIVQKDGSKGSRLQFKEVLGVGVQFNF EEEEEEEEEECEECCEEEEEEEECCCEEEEEECCCCCCCEEHHHHHCCCEEECC >Mature Secondary Structure MDKIRFFFIALLGMGAAHLSAQTADSTKTSSWTTEGFAGLKLTQVSLTNWSAGGDNSVAF CCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE DLQGTYQANYKKGKHIWNNRLELAYGLNKTGEDGMRKANDKIYLNTNYGYSIAKNWYASA EEECCEECCCCCCCHHHCCCEEEEECCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHH FATFQTQFSPGYDYSVNKDVAISEFMSPGYLTTGLGFTYDPGKIFTVVLSPASWRGTFVL EEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEECCCEEECCCEEEEEEECCCCCCEEEEE NDRLSDEGAFGVDPGKHLLSSFGANLKGEVKYEFLKNMTVYSRLDLYSDYLHKPQNIDVN CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHHHHHHCCCCCCCEE WEIQINMAINKWFSTTLTTNMVYDDDIKIVQKDGSKGSRLQFKEVLGVGVQFNF EEEEEEEEEECEECCEEEEEEEECCCEEEEEECCCCCCCEEHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA