| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yqgI [H]
Identifier: 29346732
GI number: 29346732
Start: 1647034
End: 1647909
Strand: Reverse
Name: yqgI [H]
Synonym: BT_1322
Alternate gene names: 29346732
Gene position: 1647909-1647034 (Counterclockwise)
Preceding gene: 29346733
Following gene: 29346731
Centisome position: 26.32
GC content: 47.26
Gene sequence:
>876_bases ATGGAAATACGAAGTAATAATAAAGCGAAACACCGTTCGCAGAAACTGGCATTCGGAATTTTCCGGTTGTTGAGTCTCTG TATTGTGCTGATTTTGTTTGCGATCCTCGGTTTCATTATATATAAAGGTGCGGGGGCTGTCAGTTGGGAGTTTATCACGT CCGCTCCTACGGATGGGATGACCGGCGGAGGCATCTGGCCGGCTATCGTCGGTACCTTTTATCTGATGGCAGGCAGTGCG CTTTTCGCTTTCCCGGTGGGAGTGATGAGTGGCATCTACATGAATGAGTATGCACCGAAAGGGAAGCTGGTACGCTTTAT CCGGGTGATGACGAATAACCTGAGCGGAATTCCTTCTATCGTTTTCGGTCTGTTCGGTATGGCTCTGTTTGTCAATTACA TGGGATTCGGTGACAGTATTCTGGCTGGTTCTTTGACATTAGGTTTACTTTGCGTACCTTTGGTTATCCGTACTACGGAG GAGGCGTTGAAAGCAATTCCCGACAGCATGCGTGAAGGAAGCCGGGCATTGGGAGCTACCAGGTTACAGACGATCTGGCA TGTGATTCTTCCGATGGGGATGCCGAACATCATTACAGGATTAATTCTGGCTTTGGGACGTGTTTCGGGTGAGACGGCAC CGATTCTGTTTACTTGTGCCGCTTACTTCCTGCCGCAATTACCTGCAAGCATTCTGGATCAGTGTATGGCATTGCCGTAT CACCTGTATGTGATTTCTACCAGCGGAACGGATATGGAAGCACAGTTACCGTTGGCTTATGGTACCGCTTTGGTGCTGAT AGTGATTATCCTTCTGGTTAATCTGCTGGCAAATGCATTGAGAAAATATTTTGAAAAAAGAGTAAAAACGAATTGA
Upstream 100 bases:
>100_bases GCGTTGTTCCTGTTGGGCGTCGTACTGTTCTTTATTACATTAATCATCAACTTTAGCGTGGAGTATATCTCTTCTAAAGG AATAAAACGTAGCAAGTAAC
Downstream 100 bases:
>100_bases TTAGTATATGGATACAGTAAAAATAGATACGCGCGATGTAAACTTCTGGTATGGTGACTTTCATGCCTTGAAGGGGATCA GCATGCAGATTGAAGAAAAG
Product: putative ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MEIRSNNKAKHRSQKLAFGIFRLLSLCIVLILFAILGFIIYKGAGAVSWEFITSAPTDGMTGGGIWPAIVGTFYLMAGSA LFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTLGLLCVPLVIRTTE EALKAIPDSMREGSRALGATRLQTIWHVILPMGMPNIITGLILALGRVSGETAPILFTCAAYFLPQLPASILDQCMALPY HLYVISTSGTDMEAQLPLAYGTALVLIVIILLVNLLANALRKYFEKRVKTN
Sequences:
>Translated_291_residues MEIRSNNKAKHRSQKLAFGIFRLLSLCIVLILFAILGFIIYKGAGAVSWEFITSAPTDGMTGGGIWPAIVGTFYLMAGSA LFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTLGLLCVPLVIRTTE EALKAIPDSMREGSRALGATRLQTIWHVILPMGMPNIITGLILALGRVSGETAPILFTCAAYFLPQLPASILDQCMALPY HLYVISTSGTDMEAQLPLAYGTALVLIVIILLVNLLANALRKYFEKRVKTN >Mature_291_residues MEIRSNNKAKHRSQKLAFGIFRLLSLCIVLILFAILGFIIYKGAGAVSWEFITSAPTDGMTGGGIWPAIVGTFYLMAGSA LFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSIVFGLFGMALFVNYMGFGDSILAGSLTLGLLCVPLVIRTTE EALKAIPDSMREGSRALGATRLQTIWHVILPMGMPNIITGLILALGRVSGETAPILFTCAAYFLPQLPASILDQCMALPY HLYVISTSGTDMEAQLPLAYGTALVLIVIILLVNLLANALRKYFEKRVKTN
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=297, Percent_Identity=34.006734006734, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1790164, Length=268, Percent_Identity=25.3731343283582, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31507; Mature: 31507
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS01098 LIPASE_GDSL_SER ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRSNNKAKHRSQKLAFGIFRLLSLCIVLILFAILGFIIYKGAGAVSWEFITSAPTDGM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEECCCCCCC TGGGIWPAIVGTFYLMAGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSI CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH VFGLFGMALFVNYMGFGDSILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGAT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH RLQTIWHVILPMGMPNIITGLILALGRVSGETAPILFTCAAYFLPQLPASILDQCMALPY HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCE HLYVISTSGTDMEAQLPLAYGTALVLIVIILLVNLLANALRKYFEKRVKTN EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEIRSNNKAKHRSQKLAFGIFRLLSLCIVLILFAILGFIIYKGAGAVSWEFITSAPTDGM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEECCCCCCC TGGGIWPAIVGTFYLMAGSALFAFPVGVMSGIYMNEYAPKGKLVRFIRVMTNNLSGIPSI CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH VFGLFGMALFVNYMGFGDSILAGSLTLGLLCVPLVIRTTEEALKAIPDSMREGSRALGAT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH RLQTIWHVILPMGMPNIITGLILALGRVSGETAPILFTCAAYFLPQLPASILDQCMALPY HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCE HLYVISTSGTDMEAQLPLAYGTALVLIVIILLVNLLANALRKYFEKRVKTN EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]