| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346418
Identifier: 29346418
GI number: 29346418
Start: 1255047
End: 1255835
Strand: Reverse
Name: 29346418
Synonym: BT_1008
Alternate gene names: NA
Gene position: 1255835-1255047 (Counterclockwise)
Preceding gene: 29346419
Following gene: 29346417
Centisome position: 20.06
GC content: 42.33
Gene sequence:
>789_bases ATGAAGAAATTAATTTGTATTAGCTTGTATGAGGACTTATCCATGACGACCTATGATTTGTCGAAAGTGGACAATGCCGA ACTGATTGGAATCGTAGAAAATGCTTCCGAAGGAACTTTATTTGTTTTTACTTGTGACAGGCCCAATGGAAGCAGTGTTA TTATGTGTCCCGGAGGTGGATTTCTGAAGACTAATCTGGAGAATGAAGGTATTGATTTTGCCGAATGGTTTACGAAGCTG GGAATTACATATATCGTCTTTAAATATAGAATGCCTCATGGTAATCCTGATGTTCCCGAACAAGATACCCGGTTGGCATT GAAGGTTGTGCGAGAAAAGTTTCCGGAGTTTTGTGATAAACTGGGAGTGATGGGGGCTTCTATCGGAGGATATCTGGCAA CTTTTTCAGCTACGCTTTTGCCTGATGATGAGAAGCCGGATTTTCAGATATTGATGTATCCGGTAGTCAGTGTCGATGAT CGTTTGACACATTTTCCTTGTCGTGAACGAATGTTTGGTCATTCCTATTCACCGGATAAGATGGAGCAGTATTCACCGAT TGAGCATATTACTTCCGGCACACCTGCCGCTTTCATTGTAGCAGCTGCAGATGATGCTGTGGTAAGCCCTCTGAATGGTA TTATGTATGCTGCCAGACTACAGAAAGCAGATATCCCCATTTCTCTGCACATCTATCCTGCGGGAGGACATGGATTCGGT TATAATGATAGTTTTGTGTATAAGCAGGAGTGGCTTCAGGAACTTGGAGAATGGTTGGCAAAATTGTAA
Upstream 100 bases:
>100_bases TTTCCCAAGGGGCCGATATGGTACAGATTTATTCGGCATTTATTTATTCCGGTCCTTCTGTTGTTCATAAAATAGGGAAG AAACTTAAACATTAATCGAT
Downstream 100 bases:
>100_bases TTCTTTTCTTGTAATTCGAAATATACTTCCTATATTTGTCATTAAAATATTTAATGAAAAGAAATTATGAGAAATTCAAA GGTTACATCTATGTTGGTAG
Product: xylanase
Products: NA
Alternate protein names: Pectin Acetylesterase; Esterase/Lipase-Like Protein; Esterase/Lipase; Acetylesterase; Alpha/Beta Hydrolase; Endo-1 4-Beta-Xylanase B; Endo-1 4-Beta-Xylanase; Lipase/Esterase; Acetyl Esterase Family; Acetyl Esterase; Exported Acylaminoacyl-Peptidase; Exported Polysaccharide Acetylesterase; Acetylesterase/GDSL-Like Lipase/Acylhydrolase; Beta Xylanase; Hydrolase; Carboxylic Ester Hydrolase; Hydrolase Conserved Protein; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Gdsl-Like Lipase/Acylhydrolase; Exported Endo-1 4-Beta-Xylanase
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKKLICISLYEDLSMTTYDLSKVDNAELIGIVENASEGTLFVFTCDRPNGSSVIMCPGGGFLKTNLENEGIDFAEWFTKL GITYIVFKYRMPHGNPDVPEQDTRLALKVVREKFPEFCDKLGVMGASIGGYLATFSATLLPDDEKPDFQILMYPVVSVDD RLTHFPCRERMFGHSYSPDKMEQYSPIEHITSGTPAAFIVAAADDAVVSPLNGIMYAARLQKADIPISLHIYPAGGHGFG YNDSFVYKQEWLQELGEWLAKL
Sequences:
>Translated_262_residues MKKLICISLYEDLSMTTYDLSKVDNAELIGIVENASEGTLFVFTCDRPNGSSVIMCPGGGFLKTNLENEGIDFAEWFTKL GITYIVFKYRMPHGNPDVPEQDTRLALKVVREKFPEFCDKLGVMGASIGGYLATFSATLLPDDEKPDFQILMYPVVSVDD RLTHFPCRERMFGHSYSPDKMEQYSPIEHITSGTPAAFIVAAADDAVVSPLNGIMYAARLQKADIPISLHIYPAGGHGFG YNDSFVYKQEWLQELGEWLAKL >Mature_262_residues MKKLICISLYEDLSMTTYDLSKVDNAELIGIVENASEGTLFVFTCDRPNGSSVIMCPGGGFLKTNLENEGIDFAEWFTKL GITYIVFKYRMPHGNPDVPEQDTRLALKVVREKFPEFCDKLGVMGASIGGYLATFSATLLPDDEKPDFQILMYPVVSVDD RLTHFPCRERMFGHSYSPDKMEQYSPIEHITSGTPAAFIVAAADDAVVSPLNGIMYAARLQKADIPISLHIYPAGGHGFG YNDSFVYKQEWLQELGEWLAKL
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29219; Mature: 29219
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLICISLYEDLSMTTYDLSKVDNAELIGIVENASEGTLFVFTCDRPNGSSVIMCPGGG CCCEEEEEECCCCCCEEEEHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCC FLKTNLENEGIDFAEWFTKLGITYIVFKYRMPHGNPDVPEQDTRLALKVVREKFPEFCDK EEEECCCCCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGVMGASIGGYLATFSATLLPDDEKPDFQILMYPVVSVDDRLTHFPCRERMFGHSYSPDK HCCCCCCHHHHHHHHEEEECCCCCCCCEEEEEEEEECCCCCHHCCCHHHHHCCCCCCCHH MEQYSPIEHITSGTPAAFIVAAADDAVVSPLNGIMYAARLQKADIPISLHIYPAGGHGFG HHHCCCHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC YNDSFVYKQEWLQELGEWLAKL CCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLICISLYEDLSMTTYDLSKVDNAELIGIVENASEGTLFVFTCDRPNGSSVIMCPGGG CCCEEEEEECCCCCCEEEEHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCC FLKTNLENEGIDFAEWFTKLGITYIVFKYRMPHGNPDVPEQDTRLALKVVREKFPEFCDK EEEECCCCCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGVMGASIGGYLATFSATLLPDDEKPDFQILMYPVVSVDDRLTHFPCRERMFGHSYSPDK HCCCCCCHHHHHHHHEEEECCCCCCCCEEEEEEEEECCCCCHHCCCHHHHHCCCCCCCHH MEQYSPIEHITSGTPAAFIVAAADDAVVSPLNGIMYAARLQKADIPISLHIYPAGGHGFG HHHCCCHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC YNDSFVYKQEWLQELGEWLAKL CCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA