| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346394
Identifier: 29346394
GI number: 29346394
Start: 1208581
End: 1210992
Strand: Reverse
Name: 29346394
Synonym: BT_0984
Alternate gene names: NA
Gene position: 1210992-1208581 (Counterclockwise)
Preceding gene: 29346395
Following gene: 29346393
Centisome position: 19.34
GC content: 46.85
Gene sequence:
>2412_bases ATGAAGAGATTTTATCTGGCTATAGCAATGATATTCGTTGGCGTGTCGGTTCTTTGGAGCCAGCATGCCAATGTCGTTTG GGATACTCCCAGCCGGAATTCCTCCGAATCGATGCCATGCGGCGGGGGAGATATCGGCATGAACATATGGGTAGAGGAGG GGGATATACTATTTTATCTGAGCAGGAGCGGTACGTTCGATGAAAACAACTGCCAGTTGAAGCAGGGACGTTTTCGCCTC CGGTTATCTCCCAATCCTTTTGAAGACGCAAAGGATTTCCGGCAGGAATTAAAGCTGATCGACGGTTATGTTGAAATCTC TGCCGAAGGGACACAAGTACAACTCTGGGCAGATGTTTTTCATCCGGTTGTACACATAGAAGTGATTAATGACCGGCCTT TGCAGGCGGAAATCTTTTATGAAAACTGGAGATACCAGGATCGGCTGATCAGAAAAGGAGAGGGGCAGCAATGTTCCTAT AAGTGGGCTCCTCCAAAAGGAACGATGACGCATGCCGACTTCATTTCATTGGAGAATTCATCCGAAAAGGATAGTAAACG CCTTTTGTTTTATCATCGTAATGCGGAAGAGACAGTGTTTGACGTGGCAGTTGCCCAGCAAGGGATGAATGAAGTGAAGT CGCAGATGATGAATCCTCTTAAAAATCTGACTTTCGGAGGGTATCTGTCAGGAGAGAATCTGGAATATATAGGCACTTCA GACAGTGTATATGCCGGAACTGATTACCGCGCCTGGGGATTTCGTTCTCTGAAAGCTTCTAAAAAGCATCATTTCTCAGT TGTGTTACACACAGAACAGACGGAAACCGTCACCCAATGGGAGCAAGGTCTGAAAACAGCCTGGCAACGAATTGCCCCAC AAGGAAAGATATCGTCTAAAGTGGTATCACAGGATAAAAAACAAACCCGCCTATGGTGGAATGCTTTCTGGCAACGGAGT TTTATCGAAACGATTGGTGAAACCGAAAACAAGGAGAACAGCAAAGTAGAAAAAGAAACCGGAAATAAAGAAAAGAGCGA CGCGAAAGATGCATTGAAAGAAATCACCCGAAACTACACTCTTTTCCGCTATATGCTGGGCTGCAATGCTTACGGCAGTG TCCCCACCAAATTCAACGGTGGTTTATTCACCTTCGATCCCTGCCACATAGACGAGAAGCAGGCATTCACTCCTGACTAC CGAAAGTGGGGAGGAGGAACGATGACTGCACAGAATCAGCGTCTTGTCTACTGGCCGATGCTGAAAAGCGGTGACTTCGA CATGATGCCTTCCCAATTCAATTTCTATAACCGGATGTTGAAGAATGCGGAACTCCGCAGCCATGTATATTGGCAACACG AGGGAGCCTGCTTCTGTGAGCAGATAGAAAACTTCGGCTTACCCAATCCCGCAGAATATGGTTTCAAACGTCCGGCTTGG TTTGACAAAGGACTGGAATACAATGCGTGGCTGGAATATGAATGGGATACTATTCTTGAATTTTGCCAGATGATTCTGGA AACGAAGAATTATGCCGGTGCCGACATAACTCCGTATTTGCCTTTGATTGAAAGTTCGCTGACCTTTTTCGACGAACATT ATCGACTACTCGCTTCCCGTCGGGGACGCAAAGCACTGGATGGTGACGGACACCTGATACTGTTCCCCGGCTCTGCCTGC GAAACTTACAAGATGACCAACAACGCCAGCAGCACCATCGCCGCACTGCGAACTGTATTGGAGACTTACATCAAAGTTTG CAACAATGAAAAGTGGCAAAAGATGCTGGAAACAATTCCTCCGGTTCCATTACGCTATATCGAAGTCAAGGATTCTCTTA ATCTTCAGGCTTCTACCATGACTCCGGCATGGAAACAAACGATTTCTCCCGCCAAAAGCTGGGAACGAATCAACAATATA GAGACACCACAACTCTACCCGGTTTTTCCCTGGCGCATCTACGGAGTAGGCAAGGAAAATCTGGAAATAGCTCGTGATAC GTATTTCTATGATCCCGACGCACTCAAATTCCGCTCCCATACCGGATGGAAGCAAGACAACATCTGGGCAGCCTGTCTGG GGCTGACCGAAGAAGCCAAAAGCCTTTCTCTGGCAAAGCTATCAGATGGTCCCCACCGTTTTCCTGCCTTCTGGGGACCG GGATATGACTGGACACCCGACCACAACTGGGGAGGTAGCGGCATGATAGGACTTCAGGAGATGCTCTTACAAACGAATGG AACACAAATACTTCTGTTCCCCGCCTGGCCCAAAGAATGGAACGTCCATTTCAAACTCCATGCTCCGGGCAATACGACGG TAGAAGCAACTTTAAAAGATGGAAAAGTAACAATCCTAAAGGTGTCACCGGAAAGCAGAAAGAAAGACATTGTTATAATG ATAGAAAAATAA
Upstream 100 bases:
>100_bases AGCTGTCCGCTATGGATTTGAGAATTATGTGGAAGGAGATGTATATTGTGATGGGCTGCCGTTGGGGTCTTTCCGTTCGG ACGATTGGTAATTTGAAAAT
Downstream 100 bases:
>100_bases AAAAAAGAATACATAAATAAAAAGCACTATGAATAAAAGACCGTTTTTAATCTTATCCCTATTTCTACTGCTATTCTCCT TCGATGGGCAGGCAGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MKRFYLAIAMIFVGVSVLWSQHANVVWDTPSRNSSESMPCGGGDIGMNIWVEEGDILFYLSRSGTFDENNCQLKQGRFRL RLSPNPFEDAKDFRQELKLIDGYVEISAEGTQVQLWADVFHPVVHIEVINDRPLQAEIFYENWRYQDRLIRKGEGQQCSY KWAPPKGTMTHADFISLENSSEKDSKRLLFYHRNAEETVFDVAVAQQGMNEVKSQMMNPLKNLTFGGYLSGENLEYIGTS DSVYAGTDYRAWGFRSLKASKKHHFSVVLHTEQTETVTQWEQGLKTAWQRIAPQGKISSKVVSQDKKQTRLWWNAFWQRS FIETIGETENKENSKVEKETGNKEKSDAKDALKEITRNYTLFRYMLGCNAYGSVPTKFNGGLFTFDPCHIDEKQAFTPDY RKWGGGTMTAQNQRLVYWPMLKSGDFDMMPSQFNFYNRMLKNAELRSHVYWQHEGACFCEQIENFGLPNPAEYGFKRPAW FDKGLEYNAWLEYEWDTILEFCQMILETKNYAGADITPYLPLIESSLTFFDEHYRLLASRRGRKALDGDGHLILFPGSAC ETYKMTNNASSTIAALRTVLETYIKVCNNEKWQKMLETIPPVPLRYIEVKDSLNLQASTMTPAWKQTISPAKSWERINNI ETPQLYPVFPWRIYGVGKENLEIARDTYFYDPDALKFRSHTGWKQDNIWAACLGLTEEAKSLSLAKLSDGPHRFPAFWGP GYDWTPDHNWGGSGMIGLQEMLLQTNGTQILLFPAWPKEWNVHFKLHAPGNTTVEATLKDGKVTILKVSPESRKKDIVIM IEK
Sequences:
>Translated_803_residues MKRFYLAIAMIFVGVSVLWSQHANVVWDTPSRNSSESMPCGGGDIGMNIWVEEGDILFYLSRSGTFDENNCQLKQGRFRL RLSPNPFEDAKDFRQELKLIDGYVEISAEGTQVQLWADVFHPVVHIEVINDRPLQAEIFYENWRYQDRLIRKGEGQQCSY KWAPPKGTMTHADFISLENSSEKDSKRLLFYHRNAEETVFDVAVAQQGMNEVKSQMMNPLKNLTFGGYLSGENLEYIGTS DSVYAGTDYRAWGFRSLKASKKHHFSVVLHTEQTETVTQWEQGLKTAWQRIAPQGKISSKVVSQDKKQTRLWWNAFWQRS FIETIGETENKENSKVEKETGNKEKSDAKDALKEITRNYTLFRYMLGCNAYGSVPTKFNGGLFTFDPCHIDEKQAFTPDY RKWGGGTMTAQNQRLVYWPMLKSGDFDMMPSQFNFYNRMLKNAELRSHVYWQHEGACFCEQIENFGLPNPAEYGFKRPAW FDKGLEYNAWLEYEWDTILEFCQMILETKNYAGADITPYLPLIESSLTFFDEHYRLLASRRGRKALDGDGHLILFPGSAC ETYKMTNNASSTIAALRTVLETYIKVCNNEKWQKMLETIPPVPLRYIEVKDSLNLQASTMTPAWKQTISPAKSWERINNI ETPQLYPVFPWRIYGVGKENLEIARDTYFYDPDALKFRSHTGWKQDNIWAACLGLTEEAKSLSLAKLSDGPHRFPAFWGP GYDWTPDHNWGGSGMIGLQEMLLQTNGTQILLFPAWPKEWNVHFKLHAPGNTTVEATLKDGKVTILKVSPESRKKDIVIM IEK >Mature_803_residues MKRFYLAIAMIFVGVSVLWSQHANVVWDTPSRNSSESMPCGGGDIGMNIWVEEGDILFYLSRSGTFDENNCQLKQGRFRL RLSPNPFEDAKDFRQELKLIDGYVEISAEGTQVQLWADVFHPVVHIEVINDRPLQAEIFYENWRYQDRLIRKGEGQQCSY KWAPPKGTMTHADFISLENSSEKDSKRLLFYHRNAEETVFDVAVAQQGMNEVKSQMMNPLKNLTFGGYLSGENLEYIGTS DSVYAGTDYRAWGFRSLKASKKHHFSVVLHTEQTETVTQWEQGLKTAWQRIAPQGKISSKVVSQDKKQTRLWWNAFWQRS FIETIGETENKENSKVEKETGNKEKSDAKDALKEITRNYTLFRYMLGCNAYGSVPTKFNGGLFTFDPCHIDEKQAFTPDY RKWGGGTMTAQNQRLVYWPMLKSGDFDMMPSQFNFYNRMLKNAELRSHVYWQHEGACFCEQIENFGLPNPAEYGFKRPAW FDKGLEYNAWLEYEWDTILEFCQMILETKNYAGADITPYLPLIESSLTFFDEHYRLLASRRGRKALDGDGHLILFPGSAC ETYKMTNNASSTIAALRTVLETYIKVCNNEKWQKMLETIPPVPLRYIEVKDSLNLQASTMTPAWKQTISPAKSWERINNI ETPQLYPVFPWRIYGVGKENLEIARDTYFYDPDALKFRSHTGWKQDNIWAACLGLTEEAKSLSLAKLSDGPHRFPAFWGP GYDWTPDHNWGGSGMIGLQEMLLQTNGTQILLFPAWPKEWNVHFKLHAPGNTTVEATLKDGKVTILKVSPESRKKDIVIM IEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92534; Mature: 92534
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFYLAIAMIFVGVSVLWSQHANVVWDTPSRNSSESMPCGGGDIGMNIWVEEGDILFYL CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEE SRSGTFDENNCQLKQGRFRLRLSPNPFEDAKDFRQELKLIDGYVEISAEGTQVQLWADVF ECCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHC HPVVHIEVINDRPLQAEIFYENWRYQDRLIRKGEGQQCSYKWAPPKGTMTHADFISLENS CCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEECCC SEKDSKRLLFYHRNAEETVFDVAVAQQGMNEVKSQMMNPLKNLTFGGYLSGENLEYIGTS CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEECCC DSVYAGTDYRAWGFRSLKASKKHHFSVVLHTEQTETVTQWEQGLKTAWQRIAPQGKISSK CCEEECCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHH VVSQDKKQTRLWWNAFWQRSFIETIGETENKENSKVEKETGNKEKSDAKDALKEITRNYT HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH LFRYMLGCNAYGSVPTKFNGGLFTFDPCHIDEKQAFTPDYRKWGGGTMTAQNQRLVYWPM HHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCEEECCCEEEEEEC LKSGDFDMMPSQFNFYNRMLKNAELRSHVYWQHEGACFCEQIENFGLPNPAEYGFKRPAW CCCCCCCCCCCHHHHHHHHHHCCHHHHCEEEECCCCHHHHHHHHCCCCCCHHHCCCCCCH FDKGLEYNAWLEYEWDTILEFCQMILETKNYAGADITPYLPLIESSLTFFDEHYRLLASR HCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC RGRKALDGDGHLILFPGSACETYKMTNNASSTIAALRTVLETYIKVCNNEKWQKMLETIP CCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PVPLRYIEVKDSLNLQASTMTPAWKQTISPAKSWERINNIETPQLYPVFPWRIYGVGKEN CCCEEEEEECCCCCEEEECCCHHHHHHCCHHHHHHHHCCCCCCEEEEECCEEEEECCCCC LEIARDTYFYDPDALKFRSHTGWKQDNIWAACLGLTEEAKSLSLAKLSDGPHRFPAFWGP CEEEHHEEEECCCCEEECCCCCCCCCCEEEEEECCHHHHHCCEEEECCCCCCCCCCCCCC GYDWTPDHNWGGSGMIGLQEMLLQTNGTQILLFPAWPKEWNVHFKLHAPGNTTVEATLKD CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECC GKVTILKVSPESRKKDIVIMIEK CEEEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure MKRFYLAIAMIFVGVSVLWSQHANVVWDTPSRNSSESMPCGGGDIGMNIWVEEGDILFYL CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEE SRSGTFDENNCQLKQGRFRLRLSPNPFEDAKDFRQELKLIDGYVEISAEGTQVQLWADVF ECCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHC HPVVHIEVINDRPLQAEIFYENWRYQDRLIRKGEGQQCSYKWAPPKGTMTHADFISLENS CCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEECCC SEKDSKRLLFYHRNAEETVFDVAVAQQGMNEVKSQMMNPLKNLTFGGYLSGENLEYIGTS CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEECCC DSVYAGTDYRAWGFRSLKASKKHHFSVVLHTEQTETVTQWEQGLKTAWQRIAPQGKISSK CCEEECCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHH VVSQDKKQTRLWWNAFWQRSFIETIGETENKENSKVEKETGNKEKSDAKDALKEITRNYT HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH LFRYMLGCNAYGSVPTKFNGGLFTFDPCHIDEKQAFTPDYRKWGGGTMTAQNQRLVYWPM HHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCEEECCCEEEEEEC LKSGDFDMMPSQFNFYNRMLKNAELRSHVYWQHEGACFCEQIENFGLPNPAEYGFKRPAW CCCCCCCCCCCHHHHHHHHHHCCHHHHCEEEECCCCHHHHHHHHCCCCCCHHHCCCCCCH FDKGLEYNAWLEYEWDTILEFCQMILETKNYAGADITPYLPLIESSLTFFDEHYRLLASR HCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC RGRKALDGDGHLILFPGSACETYKMTNNASSTIAALRTVLETYIKVCNNEKWQKMLETIP CCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PVPLRYIEVKDSLNLQASTMTPAWKQTISPAKSWERINNIETPQLYPVFPWRIYGVGKEN CCCEEEEEECCCCCEEEECCCHHHHHHCCHHHHHHHHCCCCCCEEEEECCEEEEECCCCC LEIARDTYFYDPDALKFRSHTGWKQDNIWAACLGLTEEAKSLSLAKLSDGPHRFPAFWGP CEEEHHEEEECCCCEEECCCCCCCCCCEEEEEECCHHHHHCCEEEECCCCCCCCCCCCCC GYDWTPDHNWGGSGMIGLQEMLLQTNGTQILLFPAWPKEWNVHFKLHAPGNTTVEATLKD CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECC GKVTILKVSPESRKKDIVIMIEK CEEEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA