| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346395
Identifier: 29346395
GI number: 29346395
Start: 1211002
End: 1212435
Strand: Reverse
Name: 29346395
Synonym: BT_0985
Alternate gene names: NA
Gene position: 1212435-1211002 (Counterclockwise)
Preceding gene: 29346396
Following gene: 29346394
Centisome position: 19.37
GC content: 45.82
Gene sequence:
>1434_bases ATGAAAAGTTCAGGAATTAAAACAAGCACAGTATTAGCAAGCTTTCTGCTCGCTGCCTGCCTGTCAATGCGTGCGGAAGT GAAACTGCCCGCTATTTTCTCTGACGGCATGGTGATGCAGCAACAAACCAATGCCAACCTTTGGGGAACGGCAACTCCGA ACAAGAAAGTAACAGTCACTACCGGCTGGAACGGAAAACAATATGCAGTAACAGCAGACAAGAACGGTTCATGGAAACTT TCAGTCTCCACTCCGGAAGCCGGCGGACCGTATACCATCACTTTCGACGATGGAACCCAAAAGACACTGAATAATATTCT GATAGGCGAATTATGGCTGTGCTCCGGTCAGAGCAACATGGAAATGCCTATGAAAGGATTCAAGAACCAACCTGTAGAGA ATGCCAATATGGATATTCTTCGCAGCAAAAATCTTCATATCCGCTTGTTTACGGTAAAACGAACTTCTACCATTACCCCT CAGAACGACGTTGTCGGCTCATGGAAAGAAGCGGCTCCGGTCAGTGTCCGTGATTTCAGTGCGACGGCCTATTATTTCGG AAGACTGGTCAATGAAATATTAGAAGTTCCGGTAGGACTCGTAGTAGCGGCATGGGGCGGTTCTGCTTGTGAGGCATGGA TGACTGCCGATTGGCTGAAAGCATTTCCGGATGCAAAGATACCTCAATCGGAAGCTGATATCAAATCGAAAAACCGTACC CCGACCGTACTCTATAATGGTATGTTGCATCCATTGATCGGCATGACCATGAAAGGAGTGATCTGGTATCAGGGAGAAGA TAACTGGAATCGTGCCCATACCTATGCGGATATGTTTACCACATTGATTAACGGTTGGCGTGCCGAATGGAAACAAGGTG ATTTTCCTTTCTACTATTGTCAGATAGCCCCTTATGACTATGGTATTATCACTGAAAAAGGTAAAGAGGTGATTAATTCT GCTTATCTACGGGAAGCACAGGCAAAGGTTGAACATCGTGTGTCTAACAGCGGCATGGCTGTACTGCTGGATGCTGGAAT GGAAAAGGGAATTCATCCCGCAAAGAAACAGGCTGCGGGAGAACGTCTGGCACTCCTTGCACTGACAAAGACGTACGGAA TAGAGGGAGTAAACGGAGAAAGCCCTTATTACAAAAGTATTGAAATCAAGAATGACACTATTGTCGTCAGCTTTGAACGT GCGAATATGTGGATCAGCGGTAAAAACTGTTTTGAATCGAAAAACTTTCAGGTGGCAGGTGAAGACAAAGTATTCTACCC GGCGAAAGCATGGATCGAACGCAGCAAAATGCTAGTAAAAAGTGATAAAGTTCCGCATCCGGTAGCTGTCCGCTATGGAT TTGAGAATTATGTGGAAGGAGATGTATATTGTGATGGGCTGCCGTTGGGGTCTTTCCGTTCGGACGATTGGTAA
Upstream 100 bases:
>100_bases TATGGACGAATGCCAAATACCGAAGAGCAGAAAACACCCTGCTTCCTGCAGGATTGCTCGGACCTTTGAATTTTGATGTA GCGAATAAAAACAAATAAGA
Downstream 100 bases:
>100_bases TTTGAAAATATGAAGAGATTTTATCTGGCTATAGCAATGATATTCGTTGGCGTGTCGGTTCTTTGGAGCCAGCATGCCAA TGTCGTTTGGGATACTCCCA
Product: putative sialic acid-specific acetylesterase II
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialate O-Acetylesterase Homolog; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MKSSGIKTSTVLASFLLAACLSMRAEVKLPAIFSDGMVMQQQTNANLWGTATPNKKVTVTTGWNGKQYAVTADKNGSWKL SVSTPEAGGPYTITFDDGTQKTLNNILIGELWLCSGQSNMEMPMKGFKNQPVENANMDILRSKNLHIRLFTVKRTSTITP QNDVVGSWKEAAPVSVRDFSATAYYFGRLVNEILEVPVGLVVAAWGGSACEAWMTADWLKAFPDAKIPQSEADIKSKNRT PTVLYNGMLHPLIGMTMKGVIWYQGEDNWNRAHTYADMFTTLINGWRAEWKQGDFPFYYCQIAPYDYGIITEKGKEVINS AYLREAQAKVEHRVSNSGMAVLLDAGMEKGIHPAKKQAAGERLALLALTKTYGIEGVNGESPYYKSIEIKNDTIVVSFER ANMWISGKNCFESKNFQVAGEDKVFYPAKAWIERSKMLVKSDKVPHPVAVRYGFENYVEGDVYCDGLPLGSFRSDDW
Sequences:
>Translated_477_residues MKSSGIKTSTVLASFLLAACLSMRAEVKLPAIFSDGMVMQQQTNANLWGTATPNKKVTVTTGWNGKQYAVTADKNGSWKL SVSTPEAGGPYTITFDDGTQKTLNNILIGELWLCSGQSNMEMPMKGFKNQPVENANMDILRSKNLHIRLFTVKRTSTITP QNDVVGSWKEAAPVSVRDFSATAYYFGRLVNEILEVPVGLVVAAWGGSACEAWMTADWLKAFPDAKIPQSEADIKSKNRT PTVLYNGMLHPLIGMTMKGVIWYQGEDNWNRAHTYADMFTTLINGWRAEWKQGDFPFYYCQIAPYDYGIITEKGKEVINS AYLREAQAKVEHRVSNSGMAVLLDAGMEKGIHPAKKQAAGERLALLALTKTYGIEGVNGESPYYKSIEIKNDTIVVSFER ANMWISGKNCFESKNFQVAGEDKVFYPAKAWIERSKMLVKSDKVPHPVAVRYGFENYVEGDVYCDGLPLGSFRSDDW >Mature_477_residues MKSSGIKTSTVLASFLLAACLSMRAEVKLPAIFSDGMVMQQQTNANLWGTATPNKKVTVTTGWNGKQYAVTADKNGSWKL SVSTPEAGGPYTITFDDGTQKTLNNILIGELWLCSGQSNMEMPMKGFKNQPVENANMDILRSKNLHIRLFTVKRTSTITP QNDVVGSWKEAAPVSVRDFSATAYYFGRLVNEILEVPVGLVVAAWGGSACEAWMTADWLKAFPDAKIPQSEADIKSKNRT PTVLYNGMLHPLIGMTMKGVIWYQGEDNWNRAHTYADMFTTLINGWRAEWKQGDFPFYYCQIAPYDYGIITEKGKEVINS AYLREAQAKVEHRVSNSGMAVLLDAGMEKGIHPAKKQAAGERLALLALTKTYGIEGVNGESPYYKSIEIKNDTIVVSFER ANMWISGKNCFESKNFQVAGEDKVFYPAKAWIERSKMLVKSDKVPHPVAVRYGFENYVEGDVYCDGLPLGSFRSDDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=395, Percent_Identity=29.873417721519, Blast_Score=147, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53065; Mature: 53065
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSGIKTSTVLASFLLAACLSMRAEVKLPAIFSDGMVMQQQTNANLWGTATPNKKVTVT CCCCCCCHHHHHHHHHHHHHHHCCCCEEECEEECCCEEEEECCCCCEEEECCCCCEEEEE TGWNGKQYAVTADKNGSWKLSVSTPEAGGPYTITFDDGTQKTLNNILIGELWLCSGQSNM ECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHEEEEEEEECCCCCC EMPMKGFKNQPVENANMDILRSKNLHIRLFTVKRTSTITPQNDVVGSWKEAAPVSVRDFS CCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCHHHCCCCEEECCC ATAYYFGRLVNEILEVPVGLVVAAWGGSACEAWMTADWLKAFPDAKIPQSEADIKSKNRT HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PTVLYNGMLHPLIGMTMKGVIWYQGEDNWNRAHTYADMFTTLINGWRAEWKQGDFPFYYC CEEEECCCHHHHHHHEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE QIAPYDYGIITEKGKEVINSAYLREAQAKVEHRVSNSGMAVLLDAGMEKGIHPAKKQAAG EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC ERLALLALTKTYGIEGVNGESPYYKSIEIKNDTIVVSFERANMWISGKNCFESKNFQVAG CEEEEEEEEHHCCCCCCCCCCCCEEEEEECCCEEEEEEEECCEEECCCCCCCCCCEEEEC EDKVFYPAKAWIERSKMLVKSDKVPHPVAVRYGFENYVEGDVYCDGLPLGSFRSDDW CCCEEECHHHHHHHHHHHEECCCCCCCEEEEECCHHCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MKSSGIKTSTVLASFLLAACLSMRAEVKLPAIFSDGMVMQQQTNANLWGTATPNKKVTVT CCCCCCCHHHHHHHHHHHHHHHCCCCEEECEEECCCEEEEECCCCCEEEECCCCCEEEEE TGWNGKQYAVTADKNGSWKLSVSTPEAGGPYTITFDDGTQKTLNNILIGELWLCSGQSNM ECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHEEEEEEEECCCCCC EMPMKGFKNQPVENANMDILRSKNLHIRLFTVKRTSTITPQNDVVGSWKEAAPVSVRDFS CCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCHHHCCCCEEECCC ATAYYFGRLVNEILEVPVGLVVAAWGGSACEAWMTADWLKAFPDAKIPQSEADIKSKNRT HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PTVLYNGMLHPLIGMTMKGVIWYQGEDNWNRAHTYADMFTTLINGWRAEWKQGDFPFYYC CEEEECCCHHHHHHHEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE QIAPYDYGIITEKGKEVINSAYLREAQAKVEHRVSNSGMAVLLDAGMEKGIHPAKKQAAG EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC ERLALLALTKTYGIEGVNGESPYYKSIEIKNDTIVVSFERANMWISGKNCFESKNFQVAG CEEEEEEEEHHCCCCCCCCCCCCEEEEEECCCEEEEEEEECCEEECCCCCCCCCCEEEEC EDKVFYPAKAWIERSKMLVKSDKVPHPVAVRYGFENYVEGDVYCDGLPLGSFRSDDW CCCEEECHHHHHHHHHHHEECCCCCCCEEEEECCHHCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA