Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346375

Identifier: 29346375

GI number: 29346375

Start: 1182131

End: 1183105

Strand: Reverse

Name: 29346375

Synonym: BT_0965

Alternate gene names: NA

Gene position: 1183105-1182131 (Counterclockwise)

Preceding gene: 29346376

Following gene: 29346374

Centisome position: 18.9

GC content: 39.79

Gene sequence:

>975_bases
ATGGAAAAGAGTAATATTATCACCAGAATCATCAAAAAGTTCCTTTCCGGACGTTTTTCTGTTGAAACGGAGGAAAAGGT
ACAGCGATGGATTATGAAGGAAGAAAACGCGGAGGAGAAAGAAAAAGCCTCATTAGAGTATTGGAACGAACTGGATACGG
AAGCCGATTCAAAAACATACAGTGCTTTAGAGCGGGTCAATTTAAGAACCGGATACAACAAAGAACATCTTGAAAATATT
GTTTTATATCATAAGTTTGTCCGCATTGTAGCCGTCGTTATTCCCATATGCTTATTGGCAGGAGGATTGCTTTATTATAT
CCCTTCCGAAAACGAGCAGATAGAAATATCCACAGCCTATGGCGAACAAAAGCGCTTGGTTCTGCCGGATAGTTCCGAAG
TATGGCTGAACGCTGGAAGTACAATTACCTATCCGAAAACTTTTACCAAAGAGAATCGTGTCGTAACCCTTGATGGTGAA
GCCTATTTCTCAGTCAGAAAAGATGATGCAAAACCTTTCATAGTAGAAACATCGCAACTATCCGTCAAGGTACTTGGAAC
GAAGTTCAATGTAAAGGCATATGCTAATGATGCGAATATTACCACAACGTTGACTAGTGGAAAAGTGGAAGTGAGTACGC
AATCCCGTCCTCCTCAAACTCTCAAGCCCAACGAACAACTCACCTATGATAAATCGACATCAGATATTGAGATATCGACA
GTAGACACTGTTGACACGAACAGTTGGGTAAAAGGGAAAATAATCTTCACCAATGCTACTGCCGAAGAAATATTCAGAAC
GCTGGAACGACGTTATGATACTGTTATCGATCATTCTACCGATTTTTCTGCCTCTAGACGGTACACTGTCAAATTCCTGA
AAGATGAGAATCTGGATGAAATGCTGAATATATTAGGAGATATAATCGGCTTTAGCTATCGGCAGAGTGGAAACAAAATA
ATAATAACCAAATAA

Upstream 100 bases:

>100_bases
GAAAGCTATCTCGTGCTTTTTATTATCTTTTTTATAAAAACATCCACTTTTTCATTGAGCTTTTTGTCATCAGACTGTAT
ATATAGTAAATACAGCAAAA

Downstream 100 bases:

>100_bases
AAAAAATAGCCTATGAACAAAAAGAACCGGGAAGCAGCTTGAGACCCTCTTCCCAGTTCTGAAATGTCTATCCTCATTTA
AACCGCGAAGTAAAAACGAA

Product: putative anti-sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MEKSNIITRIIKKFLSGRFSVETEEKVQRWIMKEENAEEKEKASLEYWNELDTEADSKTYSALERVNLRTGYNKEHLENI
VLYHKFVRIVAVVIPICLLAGGLLYYIPSENEQIEISTAYGEQKRLVLPDSSEVWLNAGSTITYPKTFTKENRVVTLDGE
AYFSVRKDDAKPFIVETSQLSVKVLGTKFNVKAYANDANITTTLTSGKVEVSTQSRPPQTLKPNEQLTYDKSTSDIEIST
VDTVDTNSWVKGKIIFTNATAEEIFRTLERRYDTVIDHSTDFSASRRYTVKFLKDENLDEMLNILGDIIGFSYRQSGNKI
IITK

Sequences:

>Translated_324_residues
MEKSNIITRIIKKFLSGRFSVETEEKVQRWIMKEENAEEKEKASLEYWNELDTEADSKTYSALERVNLRTGYNKEHLENI
VLYHKFVRIVAVVIPICLLAGGLLYYIPSENEQIEISTAYGEQKRLVLPDSSEVWLNAGSTITYPKTFTKENRVVTLDGE
AYFSVRKDDAKPFIVETSQLSVKVLGTKFNVKAYANDANITTTLTSGKVEVSTQSRPPQTLKPNEQLTYDKSTSDIEIST
VDTVDTNSWVKGKIIFTNATAEEIFRTLERRYDTVIDHSTDFSASRRYTVKFLKDENLDEMLNILGDIIGFSYRQSGNKI
IITK
>Mature_324_residues
MEKSNIITRIIKKFLSGRFSVETEEKVQRWIMKEENAEEKEKASLEYWNELDTEADSKTYSALERVNLRTGYNKEHLENI
VLYHKFVRIVAVVIPICLLAGGLLYYIPSENEQIEISTAYGEQKRLVLPDSSEVWLNAGSTITYPKTFTKENRVVTLDGE
AYFSVRKDDAKPFIVETSQLSVKVLGTKFNVKAYANDANITTTLTSGKVEVSTQSRPPQTLKPNEQLTYDKSTSDIEIST
VDTVDTNSWVKGKIIFTNATAEEIFRTLERRYDTVIDHSTDFSASRRYTVKFLKDENLDEMLNILGDIIGFSYRQSGNKI
IITK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37037; Mature: 37037

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSNIITRIIKKFLSGRFSVETEEKVQRWIMKEENAEEKEKASLEYWNELDTEADSKTY
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
SALERVNLRTGYNKEHLENIVLYHKFVRIVAVVIPICLLAGGLLYYIPSENEQIEISTAY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECC
GEQKRLVLPDSSEVWLNAGSTITYPKTFTKENRVVTLDGEAYFSVRKDDAKPFIVETSQL
CCCCEEECCCCCCEEEECCCEEECCCCCCCCCCEEEECCCEEEEEECCCCCCEEEEECCE
SVKVLGTKFNVKAYANDANITTTLTSGKVEVSTQSRPPQTLKPNEQLTYDKSTSDIEIST
EEEEEEEEEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCEEECCCCCCEEEEE
VDTVDTNSWVKGKIIFTNATAEEIFRTLERRYDTVIDHSTDFSASRRYTVKFLKDENLDE
EEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHH
MLNILGDIIGFSYRQSGNKIIITK
HHHHHHHHHCCCEECCCCEEEEEC
>Mature Secondary Structure
MEKSNIITRIIKKFLSGRFSVETEEKVQRWIMKEENAEEKEKASLEYWNELDTEADSKTY
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
SALERVNLRTGYNKEHLENIVLYHKFVRIVAVVIPICLLAGGLLYYIPSENEQIEISTAY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECC
GEQKRLVLPDSSEVWLNAGSTITYPKTFTKENRVVTLDGEAYFSVRKDDAKPFIVETSQL
CCCCEEECCCCCCEEEECCCEEECCCCCCCCCCEEEECCCEEEEEECCCCCCEEEEECCE
SVKVLGTKFNVKAYANDANITTTLTSGKVEVSTQSRPPQTLKPNEQLTYDKSTSDIEIST
EEEEEEEEEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCEEECCCCCCEEEEE
VDTVDTNSWVKGKIIFTNATAEEIFRTLERRYDTVIDHSTDFSASRRYTVKFLKDENLDE
EEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHH
MLNILGDIIGFSYRQSGNKIIITK
HHHHHHHHHCCCEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA