| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346374
Identifier: 29346374
GI number: 29346374
Start: 1179568
End: 1181970
Strand: Reverse
Name: 29346374
Synonym: BT_0964
Alternate gene names: NA
Gene position: 1181970-1179568 (Counterclockwise)
Preceding gene: 29346375
Following gene: 29346373
Centisome position: 18.88
GC content: 41.16
Gene sequence:
>2403_bases ATGATCATTCTTTTGTTTTTTTCTATTCTGTCATTGACGGCAATTTCCCAAAATGCAGAAAAGAAAATTACAATTCAAAA TAAAAATATCTCTTTAAAAGAAGCCTTTGAGCAAATAGAACTACAAACAGACTATAGCATAGCTTACGAACAGTCAAACC TGAACCTGAAAAAGAGGCAAGCATTGTCGCTAAAGTCCGCAAGCATTGAGAAGGCACTAACACAAATATTGAAAGGTACC GGATACATATACAAAATAAAGGGATATCATATTATTATCTCTCTGCCGACACCAAAAACAGAAACAATCGGCGAAAAGAC ACAAAAACTAACGCAAACCATAAGAGGAATTGTAGTCGATTCCAAAACTAATGCTCCAATAGAGTATGCCTCTGTCTATG TCTTAGAGGAACCTTCCTTGAATAGCTCCACAGATAGTCTGGGAAACTTCAGAATCAGCAATGTTCCTATTGGACGCTAC AATATTCAAGCGTCTTTTACGGGATATCACATAAGCATAATCAGTGAGGTATCCGTAACTTCATCCAAAGAAGTATATGT AGAAATTCCGATGGACGAGAATATCCAATATCTGGCAGAAGTCCTCGTGAAGCCGGAAATAAAGAAAAACCGGACGATCA ATCCTATGGCTATCACAGGCGGCCGTATGATCAGCATGGAAGAAGCCGGCAGATTTGCCAACGGCTTCGATGACCCTGCA CGATTAAGTGCCGCTTTCGCAGGAGTAGCGGGAGACATCGGCACCAATGCCGTAGCCATTCGCGGAAACTCCCCGCAATT CACGCAATGGAGGCTGGAAGGAATTGAGATACCCAATCCGACTCATTTTGCCGATTTGTCGGGATTGGGCGGAGGTTTCC TGTCAGCTCTGAGTACACAGGTGATCGGAAATTCGGATTTTTACAACGGAGCTTTTCCCGCAGAATATAACAATGTATTA TCGGGTGTTTTCGATATGCACCTGCGCAATGGAAATAATCAAAAGTACGAACACGCTTTTCAAGTCGGACTAATGGGTAT CGATCTGTCATCAGAGGGACCAATCAGTAAAAAGCGAGGAAGTTCTTATCTCGTTAACTATCGTTTTTCGACTACATCAC TGGCTACCGGCAATGACCTGAATCTTAAATATCAGGATTTAGCATTCAAGCTAAACTTTCCGACCTCCAAAGCCGGCACC TTTTCTATTTGGGGATTAGGATTGATTGACAGAAACAAAGCTCCAATAGAAGAGCGTTCCAAATGGGAAACTCTGGGAGA CCGACAAGCAGGAGAAAACAGACTAGAAAAAATGGTGGGAGGACTTGCACACAAGTATGTGATGAATGAAAACACGTATA TCCGCTCTTCCCTGTCTGCTACTTATTCCAAAGATCATACAGTGGTAGATCAACAAGCAGATGACAAACTAATCAGAGTA GGAGATATCCGGAACAGCAGGTGGGACTTCGTTTTTAATTCTTATCTGAATACGAAGTTCAGTCCGAGACATACTAACAG AACGGGGGTTACGATTACAAACCTTCACTATGATCTTGATTATCAGGTCAGCCGTTATTTCGGATTAAACAGACCTATGG AACAGATTTCAAAAGGTGATGGTGAAAGCACAGTCTTTTCGGCCTATAGCAGTTCGGTTATCAATCTGAATAATAACTGG GACACTAGCTTAGGAGTAACAGCCCAATATTTTACTTTGAACAATAACTTATCCATCGAACCGCGGGTTGCCCTAAAATG GAAAATAAATCCGAAACATTCTTTGGCGTTGGCCTATGGATTACATAGTCGCAGGGAAAAGCTGGATTATTATTTTGTAG AAAAGGTCGTCAACGGCAAGAACCAGTCAAATCGATATCTGGATTTTTCCCGGGCACATCATGTCGGGATGACATACGAC TGGAATATCAATCAAAACCTGCATTTAAAGATAGAGCCTTATTTCCAATATTTATTTCGTATACCGGTTGAAAAGAACTC CTCCTTCTCGGTCATTAACCATGAGGAATTTTATTTGGACAGAATCTTGACCAACACCGGTCAAGGCAGAAATTATGGAA TAGACATCACGCTGGAACAATATATGAAAAATGGCTTCTACTATATGATTACAGGTTCTTTGTTTAAATCGAAATATAGG GGAGGAGATAACGTTTGGCGTAATACAAGACTGGATAAGAACTATCTGCTGAACTTACTTGCCGGAAAAGAATGGATGGT CGGCAAACTTAAACAAAACGTACTGAGTCTCAACGGACGTTTATTCTTTCAGGGAGGGGAACGCTACACCCCCGTAAACG AAGAAAGAAGTCAGACAGAGCATGACATCTTTTTTGATGAAACGAAAGCATACAGCAAAAGATTCAATCCTTCCCTTCCA TAA
Upstream 100 bases:
>100_bases GAAATGTCTATCCTCATTTAAACCGCGAAGTAAAAACGAAGTATCAACGTACAAATATAAAATAATGAATCGAATTAATG CGAATAAAAAACCAGATAAG
Downstream 100 bases:
>100_bases ACGGTGATGTTTCTGTCAGTTTCCGGATAAATAAGAAAAGAGTATCTCATGAGTTCTCATTGAAGATTCTGAATGTAGGT ATGCGCACCGGAATGCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Nb-Dependent Receptor Plug; Ferric Aerobactin Receptor; Outer Membrane Protein; NB Dependent Outer Membrane Protein; Nb-Dependent Receptor; NB-Dependent Receptor
Number of amino acids: Translated: 800; Mature: 800
Protein sequence:
>800_residues MIILLFFSILSLTAISQNAEKKITIQNKNISLKEAFEQIELQTDYSIAYEQSNLNLKKRQALSLKSASIEKALTQILKGT GYIYKIKGYHIIISLPTPKTETIGEKTQKLTQTIRGIVVDSKTNAPIEYASVYVLEEPSLNSSTDSLGNFRISNVPIGRY NIQASFTGYHISIISEVSVTSSKEVYVEIPMDENIQYLAEVLVKPEIKKNRTINPMAITGGRMISMEEAGRFANGFDDPA RLSAAFAGVAGDIGTNAVAIRGNSPQFTQWRLEGIEIPNPTHFADLSGLGGGFLSALSTQVIGNSDFYNGAFPAEYNNVL SGVFDMHLRNGNNQKYEHAFQVGLMGIDLSSEGPISKKRGSSYLVNYRFSTTSLATGNDLNLKYQDLAFKLNFPTSKAGT FSIWGLGLIDRNKAPIEERSKWETLGDRQAGENRLEKMVGGLAHKYVMNENTYIRSSLSATYSKDHTVVDQQADDKLIRV GDIRNSRWDFVFNSYLNTKFSPRHTNRTGVTITNLHYDLDYQVSRYFGLNRPMEQISKGDGESTVFSAYSSSVINLNNNW DTSLGVTAQYFTLNNNLSIEPRVALKWKINPKHSLALAYGLHSRREKLDYYFVEKVVNGKNQSNRYLDFSRAHHVGMTYD WNINQNLHLKIEPYFQYLFRIPVEKNSSFSVINHEEFYLDRILTNTGQGRNYGIDITLEQYMKNGFYYMITGSLFKSKYR GGDNVWRNTRLDKNYLLNLLAGKEWMVGKLKQNVLSLNGRLFFQGGERYTPVNEERSQTEHDIFFDETKAYSKRFNPSLP
Sequences:
>Translated_800_residues MIILLFFSILSLTAISQNAEKKITIQNKNISLKEAFEQIELQTDYSIAYEQSNLNLKKRQALSLKSASIEKALTQILKGT GYIYKIKGYHIIISLPTPKTETIGEKTQKLTQTIRGIVVDSKTNAPIEYASVYVLEEPSLNSSTDSLGNFRISNVPIGRY NIQASFTGYHISIISEVSVTSSKEVYVEIPMDENIQYLAEVLVKPEIKKNRTINPMAITGGRMISMEEAGRFANGFDDPA RLSAAFAGVAGDIGTNAVAIRGNSPQFTQWRLEGIEIPNPTHFADLSGLGGGFLSALSTQVIGNSDFYNGAFPAEYNNVL SGVFDMHLRNGNNQKYEHAFQVGLMGIDLSSEGPISKKRGSSYLVNYRFSTTSLATGNDLNLKYQDLAFKLNFPTSKAGT FSIWGLGLIDRNKAPIEERSKWETLGDRQAGENRLEKMVGGLAHKYVMNENTYIRSSLSATYSKDHTVVDQQADDKLIRV GDIRNSRWDFVFNSYLNTKFSPRHTNRTGVTITNLHYDLDYQVSRYFGLNRPMEQISKGDGESTVFSAYSSSVINLNNNW DTSLGVTAQYFTLNNNLSIEPRVALKWKINPKHSLALAYGLHSRREKLDYYFVEKVVNGKNQSNRYLDFSRAHHVGMTYD WNINQNLHLKIEPYFQYLFRIPVEKNSSFSVINHEEFYLDRILTNTGQGRNYGIDITLEQYMKNGFYYMITGSLFKSKYR GGDNVWRNTRLDKNYLLNLLAGKEWMVGKLKQNVLSLNGRLFFQGGERYTPVNEERSQTEHDIFFDETKAYSKRFNPSLP >Mature_800_residues MIILLFFSILSLTAISQNAEKKITIQNKNISLKEAFEQIELQTDYSIAYEQSNLNLKKRQALSLKSASIEKALTQILKGT GYIYKIKGYHIIISLPTPKTETIGEKTQKLTQTIRGIVVDSKTNAPIEYASVYVLEEPSLNSSTDSLGNFRISNVPIGRY NIQASFTGYHISIISEVSVTSSKEVYVEIPMDENIQYLAEVLVKPEIKKNRTINPMAITGGRMISMEEAGRFANGFDDPA RLSAAFAGVAGDIGTNAVAIRGNSPQFTQWRLEGIEIPNPTHFADLSGLGGGFLSALSTQVIGNSDFYNGAFPAEYNNVL SGVFDMHLRNGNNQKYEHAFQVGLMGIDLSSEGPISKKRGSSYLVNYRFSTTSLATGNDLNLKYQDLAFKLNFPTSKAGT FSIWGLGLIDRNKAPIEERSKWETLGDRQAGENRLEKMVGGLAHKYVMNENTYIRSSLSATYSKDHTVVDQQADDKLIRV GDIRNSRWDFVFNSYLNTKFSPRHTNRTGVTITNLHYDLDYQVSRYFGLNRPMEQISKGDGESTVFSAYSSSVINLNNNW DTSLGVTAQYFTLNNNLSIEPRVALKWKINPKHSLALAYGLHSRREKLDYYFVEKVVNGKNQSNRYLDFSRAHHVGMTYD WNINQNLHLKIEPYFQYLFRIPVEKNSSFSVINHEEFYLDRILTNTGQGRNYGIDITLEQYMKNGFYYMITGSLFKSKYR GGDNVWRNTRLDKNYLLNLLAGKEWMVGKLKQNVLSLNGRLFFQGGERYTPVNEERSQTEHDIFFDETKAYSKRFNPSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90642; Mature: 90642
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILLFFSILSLTAISQNAEKKITIQNKNISLKEAFEQIELQTDYSIAYEQSNLNLKKRQ CEEEEEHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHEEECCCEEEEECCCCCCHHHH ALSLKSASIEKALTQILKGTGYIYKIKGYHIIISLPTPKTETIGEKTQKLTQTIRGIVVD HHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE SKTNAPIEYASVYVLEEPSLNSSTDSLGNFRISNVPIGRYNIQASFTGYHISIISEVSVT CCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEEECEEEEEEEEEEEEC SSKEVYVEIPMDENIQYLAEVLVKPEIKKNRTINPMAITGGRMISMEEAGRFANGFDDPA CCCEEEEECCCCCCHHHHHHHHHCCCHHCCCCCCCEEECCCEEEEHHHCCCCCCCCCCHH RLSAAFAGVAGDIGTNAVAIRGNSPQFTQWRLEGIEIPNPTHFADLSGLGGGFLSALSTQ HHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECEECCCCCCCCCCCCCCHHHHHHHHHH VIGNSDFYNGAFPAEYNNVLSGVFDMHLRNGNNQKYEHAFQVGLMGIDLSSEGPISKKRG HCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHEEEEEEEEEECCCCCCCCCCCC SSYLVNYRFSTTSLATGNDLNLKYQDLAFKLNFPTSKAGTFSIWGLGLIDRNKAPIEERS CCEEEEEEEECEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHH KWETLGDRQAGENRLEKMVGGLAHKYVMNENTYIRSSLSATYSKDHTVVDQQADDKLIRV HHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCEEECCCCCCCEEEE GDIRNSRWDFVFNSYLNTKFSPRHTNRTGVTITNLHYDLDYQVSRYFGLNRPMEQISKGD ECCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEEEEECCCEEHHHCCCCCCHHHHHCCC GESTVFSAYSSSVINLNNNWDTSLGVTAQYFTLNNNLSIEPRVALKWKINPKHSLALAYG CCCEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCEECCEEEEEEEECCCCCEEEEEC LHSRREKLDYYFVEKVVNGKNQSNRYLDFSRAHHVGMTYDWNINQNLHLKIEPYFQYLFR HHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEECCCCEEEEEEEHHHHEEEE IPVEKNSSFSVINHEEFYLDRILTNTGQGRNYGIDITLEQYMKNGFYYMITGSLFKSKYR CCCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCEEEEECHHHHHHCC GGDNVWRNTRLDKNYLLNLLAGKEWMVGKLKQNVLSLNGRLFFQGGERYTPVNEERSQTE CCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCC HDIFFDETKAYSKRFNPSLP CCEEECHHHHHHHCCCCCCC >Mature Secondary Structure MIILLFFSILSLTAISQNAEKKITIQNKNISLKEAFEQIELQTDYSIAYEQSNLNLKKRQ CEEEEEHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHEEECCCEEEEECCCCCCHHHH ALSLKSASIEKALTQILKGTGYIYKIKGYHIIISLPTPKTETIGEKTQKLTQTIRGIVVD HHHHHHHHHHHHHHHHHHCCCEEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE SKTNAPIEYASVYVLEEPSLNSSTDSLGNFRISNVPIGRYNIQASFTGYHISIISEVSVT CCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEEECEEEEEEEEEEEEC SSKEVYVEIPMDENIQYLAEVLVKPEIKKNRTINPMAITGGRMISMEEAGRFANGFDDPA CCCEEEEECCCCCCHHHHHHHHHCCCHHCCCCCCCEEECCCEEEEHHHCCCCCCCCCCHH RLSAAFAGVAGDIGTNAVAIRGNSPQFTQWRLEGIEIPNPTHFADLSGLGGGFLSALSTQ HHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECEECCCCCCCCCCCCCCHHHHHHHHHH VIGNSDFYNGAFPAEYNNVLSGVFDMHLRNGNNQKYEHAFQVGLMGIDLSSEGPISKKRG HCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHEEEEEEEEEECCCCCCCCCCCC SSYLVNYRFSTTSLATGNDLNLKYQDLAFKLNFPTSKAGTFSIWGLGLIDRNKAPIEERS CCEEEEEEEECEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHH KWETLGDRQAGENRLEKMVGGLAHKYVMNENTYIRSSLSATYSKDHTVVDQQADDKLIRV HHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCEEECCCCCCCEEEE GDIRNSRWDFVFNSYLNTKFSPRHTNRTGVTITNLHYDLDYQVSRYFGLNRPMEQISKGD ECCCCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEEEEECCCEEHHHCCCCCCHHHHHCCC GESTVFSAYSSSVINLNNNWDTSLGVTAQYFTLNNNLSIEPRVALKWKINPKHSLALAYG CCCEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCEECCEEEEEEEECCCCCEEEEEC LHSRREKLDYYFVEKVVNGKNQSNRYLDFSRAHHVGMTYDWNINQNLHLKIEPYFQYLFR HHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEECCCCEEEEEEEHHHHEEEE IPVEKNSSFSVINHEEFYLDRILTNTGQGRNYGIDITLEQYMKNGFYYMITGSLFKSKYR CCCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCEEEEECHHHHHHCC GGDNVWRNTRLDKNYLLNLLAGKEWMVGKLKQNVLSLNGRLFFQGGERYTPVNEERSQTE CCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCC HDIFFDETKAYSKRFNPSLP CCEEECHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA