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The map label for this gene is yccM [C]

Identifier: 29346373

GI number: 29346373

Start: 1177563

End: 1179071

Strand: Reverse

Name: yccM [C]

Synonym: BT_0963

Alternate gene names: 29346373

Gene position: 1179071-1177563 (Counterclockwise)

Preceding gene: 29346374

Following gene: 29346372

Centisome position: 18.83

GC content: 46.52

Gene sequence:

>1509_bases
ATGTTGCGTACTATCAGACTTACAGCCGCAATCGTGTGTTTCACACTTATTACCCTGCTGTTCCTTGATTTCACAGGGAC
ATTGCACACATGGTTCGGATGGCTGGCGAAAATTCAGTTCCTGCCGGCAGTATTAGCCTTGAACATAGGTGTCGTGCTAT
TCCTTATTGTGCTCACATTACTATTCGGGCGTATTTATTGTTCGGTCATTTGCCCGTTAGGAGTATTTCAGGATGCTGTT
TCATGGTTCTCCGGCAAACAGAAAAAGAACCGCTTCCGTTATTCTCCGGCTTTAAAATGGCTGAGATATGGTGTATTGGC
TGTATTCATCCTTGCCTTGGTTGCCGGACTGAATGCTTTTGTCGTTCTACTGGCACCTTACAGTGCATACGGCCGGATGG
TTTCCAGTCTGCTGGCTCCGGTATGGCAATGGGGAAATAATCTCTTGGCATATTTTGCCGAACGGGCAGAAAGCTATGCT
TTCTATGAAGTGGATGTCTGGATGAAAAGTCTTTCAACACTGATCATTGCTGTGATTACCCTTATTGTGCTTTTTGTTTT
GGCATGGCGTAACGGACGTACTTATTGCAATACCATTTGTCCTGTCGGCACCGTATTGGGATTCATATCACGATACTCCA
TCTTCAAGCCTGTGATCGATACTTCCAAATGTAATAGCTGCGGATTGTGCGCACGTAATTGTAAGGCATCCTGTATTAAT
GCCAAAGCCCATGAAATTGATTATAGCCGTTGTGTCGCTTGTATGGATTGCCTGGGAAAATGTAAGCAAGGAGCTATTAA
ATATACCAGACGTATTCAAAAGAAAGAAGGGGTTAATACGGAAGCGGTTAAAATAAAATCCGTGACCTCGGAACAGATTG
ACAATGCCCGTCGTAGTTTTCTTTCGGCATCGACTATTTTCGCTACTTCTACCATACTGAAAGCACAGGAGAAAAAGGTA
GACGGAGGATTGGCAGCCATTGAAGACAAGAAGATTCCCAACCGGGAGAATCCGATTTATCCTCCCGGATCATTAAATGC
ACGCAACTTTGCCCAACATTGTACTGCCTGTCAGCTATGTGTCTCTGTTTGTCCTACTCAGGTATTACGTCCATCCGGTA
ATCTGGCAACTCTCATGCAGCCGGAAATGTCCTACGAGCGTGGTTATTGCCGTCCGGAGTGTGCCAAATGTGCGGAAGTA
TGCCCTACAGATGCCATTCATCTGACCAGCCTGGCAGAGAAATCCGCTATCCAAATCGGGCATGCTGTATGGATCAAGGA
GAACTGCGTACCGCTGACTGATGGAATGGAATGCGGCAACTGTGCCCGCCATTGTCCGGCAGCCGCTATTCAGATGGTAG
CTTCCGATCCCGAAATAGCGGACTCACCGAAGATTCCGGCAATCAATGTCGAACGGTGTATTGGTTGTGGTGCTTGCGAG
AATCTTTGTCCATCCCGTCCTTTCAGTGCCATTTACGTGACCGGACATCAGATGCACAGAATTGTATGA

Upstream 100 bases:

>100_bases
CTGCTTAAATTTGCATCGGTTAAAAAGCATAAGATTCGATTCTGATGGAATTGAAAATAATTAAGATATAACTACTATAA
ATTGAAAATCTAATAAATTT

Downstream 100 bases:

>100_bases
TTTAAATCAGAACAAGATTATGGAAGAAAAAAATAAGAAAGACATAAACAGAAGAGATTTTATCAAAATCGTAGGTATCA
GTGCGGCTACATCGACAGCG

Product: putative ferredoxin-type protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MLRTIRLTAAIVCFTLITLLFLDFTGTLHTWFGWLAKIQFLPAVLALNIGVVLFLIVLTLLFGRIYCSVICPLGVFQDAV
SWFSGKQKKNRFRYSPALKWLRYGVLAVFILALVAGLNAFVVLLAPYSAYGRMVSSLLAPVWQWGNNLLAYFAERAESYA
FYEVDVWMKSLSTLIIAVITLIVLFVLAWRNGRTYCNTICPVGTVLGFISRYSIFKPVIDTSKCNSCGLCARNCKASCIN
AKAHEIDYSRCVACMDCLGKCKQGAIKYTRRIQKKEGVNTEAVKIKSVTSEQIDNARRSFLSASTIFATSTILKAQEKKV
DGGLAAIEDKKIPNRENPIYPPGSLNARNFAQHCTACQLCVSVCPTQVLRPSGNLATLMQPEMSYERGYCRPECAKCAEV
CPTDAIHLTSLAEKSAIQIGHAVWIKENCVPLTDGMECGNCARHCPAAAIQMVASDPEIADSPKIPAINVERCIGCGACE
NLCPSRPFSAIYVTGHQMHRIV

Sequences:

>Translated_502_residues
MLRTIRLTAAIVCFTLITLLFLDFTGTLHTWFGWLAKIQFLPAVLALNIGVVLFLIVLTLLFGRIYCSVICPLGVFQDAV
SWFSGKQKKNRFRYSPALKWLRYGVLAVFILALVAGLNAFVVLLAPYSAYGRMVSSLLAPVWQWGNNLLAYFAERAESYA
FYEVDVWMKSLSTLIIAVITLIVLFVLAWRNGRTYCNTICPVGTVLGFISRYSIFKPVIDTSKCNSCGLCARNCKASCIN
AKAHEIDYSRCVACMDCLGKCKQGAIKYTRRIQKKEGVNTEAVKIKSVTSEQIDNARRSFLSASTIFATSTILKAQEKKV
DGGLAAIEDKKIPNRENPIYPPGSLNARNFAQHCTACQLCVSVCPTQVLRPSGNLATLMQPEMSYERGYCRPECAKCAEV
CPTDAIHLTSLAEKSAIQIGHAVWIKENCVPLTDGMECGNCARHCPAAAIQMVASDPEIADSPKIPAINVERCIGCGACE
NLCPSRPFSAIYVTGHQMHRIV
>Mature_502_residues
MLRTIRLTAAIVCFTLITLLFLDFTGTLHTWFGWLAKIQFLPAVLALNIGVVLFLIVLTLLFGRIYCSVICPLGVFQDAV
SWFSGKQKKNRFRYSPALKWLRYGVLAVFILALVAGLNAFVVLLAPYSAYGRMVSSLLAPVWQWGNNLLAYFAERAESYA
FYEVDVWMKSLSTLIIAVITLIVLFVLAWRNGRTYCNTICPVGTVLGFISRYSIFKPVIDTSKCNSCGLCARNCKASCIN
AKAHEIDYSRCVACMDCLGKCKQGAIKYTRRIQKKEGVNTEAVKIKSVTSEQIDNARRSFLSASTIFATSTILKAQEKKV
DGGLAAIEDKKIPNRENPIYPPGSLNARNFAQHCTACQLCVSVCPTQVLRPSGNLATLMQPEMSYERGYCRPECAKCAEV
CPTDAIHLTSLAEKSAIQIGHAVWIKENCVPLTDGMECGNCARHCPAAAIQMVASDPEIADSPKIPAINVERCIGCGACE
NLCPSRPFSAIYVTGHQMHRIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787226, Length=228, Percent_Identity=24.5614035087719, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55327; Mature: 55327

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCCEEEEECHHHHHCC
>Mature Secondary Structure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HCCCCCCCCEEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA