| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is tas [C]
Identifier: 29346372
GI number: 29346372
Start: 1176140
End: 1177543
Strand: Reverse
Name: tas [C]
Synonym: BT_0962
Alternate gene names: 29346372
Gene position: 1177543-1176140 (Counterclockwise)
Preceding gene: 29346373
Following gene: 29346371
Centisome position: 18.81
GC content: 44.8
Gene sequence:
>1404_bases ATGGAAGAAAAAAATAAGAAAGACATAAACAGAAGAGATTTTATCAAAATCGTAGGTATCAGTGCGGCTACATCGACAGC GATACTATACGGATGCTCGTCAAAAGGCACTTCTTCATCAAGCAGTGCATCGGCAGAAGGGGAAATTCCTACCGATAAAA TGACTTACCGCACGTCTCCAACAACAGGCGACCGCGTGTCACTTTTAGGATACGGCTGTATGCGCTGGCCTCTCAAACCG GCTCCCGACGGTAAGGGTGAAGTGATCGATCAGGATGCAGTGAACGGATTAATCGATTACGCCATCGCTCATGGAGTAAA CTATTTCGATACATCTCCGGCCTACGTGCAAGGTTTTTCTGAGAAATCCACAGGAATTGCGCTAAGCCGTTATCCACGTG ATAAATACTTCATTGCTACCAAACTATCCAACTTCTCTCCGGATACATGGTCACGCGAAGCTTCCCTCAAAATGTATCAT AAATCTTTTGCAGACCTTCAGGTGGACTATATCGATTATATGCTGCTTCATGGCATCGGTATGGGTGGAATGGACGCCCT TAAAGGACGATATCTGGATAATGGAATGCTTGACTTTTTGATAAAAGAACGTGAAGCAGGTCGCATCCGCAATCTCGGAT TCTCCTATCATGGCGACATCGAAGTATATGATTATCTGCTTTCCCGACACGATGAGATAAAGTGGGATTTCGTACAAATA CAGCTTAACTATGTGGACTGGAAGCATGCGAAAGAGACAAATGCCCGGAATACCGATGCCGAATATCTGTATGGTGAGCT ACATAAAAGGGGGATTCCATCCATTATCATGGAACCGCTTTTGGGAGGTCGCTTGTCTAAACTGAATGACAATCTGGTGG CACGCCTCAAACAACGCCGTCCGGAAAGCAGCGTAGCTTCATGGGCTTTCCGCTTTGCCGGAACGTTCCCCGATATATTG ACTGTATTAAGCGGTATGACATATATGGAACATTTGCAGGATAACCTGCGTACTTATTCTCCATTGGAACCGCTGACTGA CGAAGAGATGGATTTTCTGGAAGACACGGCACAGTTAATGCTGAAGTATCCTACCATCCCTTGCAATGACTGCAAATATT GTATGCCATGTCCGTATGGTCTGGATATTCCGGCTGTCTTATTACATTATAACCGTTGTGTCAATGAAGGCAATGTTCCT AAAAACGGACAGGATGAGAATTATCTCAAAGCCCGCCGGGCATTTCTTGTAGGATATGACCGCAGTGTACCTAAACTCCG TCAGGCTAGTCATTGCATCGGATGTAATCAATGCGTACCTCACTGTCCTCAAAACATAGATATACCCAAAGAACTGCACC GGATTGACCAATTTGTAGAACAACTGAAACAAGGAACCTTATAA
Upstream 100 bases:
>100_bases GGTGCTTGCGAGAATCTTTGTCCATCCCGTCCTTTCAGTGCCATTTACGTGACCGGACATCAGATGCACAGAATTGTATG ATTTAAATCAGAACAAGATT
Downstream 100 bases:
>100_bases TGGAAGAATTAATCAACTTATTACACTCGGGAGGATATTCCTGTGTGATTGCCAATGGAGACAACATACGTACCTTTACC CAACGTGGCGTAGCGGATTT
Product: aldo/keto reductase
Products: NA
Alternate protein names: Aldo/Keto Reductase Family Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family; Oxidoreductase; Aldo/Keto Reductase Family Protein; Oxidoreductase Of Aldo/Keto Reductase Family; Oxidoreductase Aldo/Keto Reductase Family Protein; Fe-S Oxidoreductase; Twin-Arginine Translocation Pathway Signal Protein; Oxidoreductase Aryl-Alcohol Dehydrogenase-Like; NADPH-Dependent Oxidoreductase; Oxidoreductase-Like Protein; Aldo/Keto Reductase Ferredoxin Subunit
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MEEKNKKDINRRDFIKIVGISAATSTAILYGCSSKGTSSSSSASAEGEIPTDKMTYRTSPTTGDRVSLLGYGCMRWPLKP APDGKGEVIDQDAVNGLIDYAIAHGVNYFDTSPAYVQGFSEKSTGIALSRYPRDKYFIATKLSNFSPDTWSREASLKMYH KSFADLQVDYIDYMLLHGIGMGGMDALKGRYLDNGMLDFLIKEREAGRIRNLGFSYHGDIEVYDYLLSRHDEIKWDFVQI QLNYVDWKHAKETNARNTDAEYLYGELHKRGIPSIIMEPLLGGRLSKLNDNLVARLKQRRPESSVASWAFRFAGTFPDIL TVLSGMTYMEHLQDNLRTYSPLEPLTDEEMDFLEDTAQLMLKYPTIPCNDCKYCMPCPYGLDIPAVLLHYNRCVNEGNVP KNGQDENYLKARRAFLVGYDRSVPKLRQASHCIGCNQCVPHCPQNIDIPKELHRIDQFVEQLKQGTL
Sequences:
>Translated_467_residues MEEKNKKDINRRDFIKIVGISAATSTAILYGCSSKGTSSSSSASAEGEIPTDKMTYRTSPTTGDRVSLLGYGCMRWPLKP APDGKGEVIDQDAVNGLIDYAIAHGVNYFDTSPAYVQGFSEKSTGIALSRYPRDKYFIATKLSNFSPDTWSREASLKMYH KSFADLQVDYIDYMLLHGIGMGGMDALKGRYLDNGMLDFLIKEREAGRIRNLGFSYHGDIEVYDYLLSRHDEIKWDFVQI QLNYVDWKHAKETNARNTDAEYLYGELHKRGIPSIIMEPLLGGRLSKLNDNLVARLKQRRPESSVASWAFRFAGTFPDIL TVLSGMTYMEHLQDNLRTYSPLEPLTDEEMDFLEDTAQLMLKYPTIPCNDCKYCMPCPYGLDIPAVLLHYNRCVNEGNVP KNGQDENYLKARRAFLVGYDRSVPKLRQASHCIGCNQCVPHCPQNIDIPKELHRIDQFVEQLKQGTL >Mature_467_residues MEEKNKKDINRRDFIKIVGISAATSTAILYGCSSKGTSSSSSASAEGEIPTDKMTYRTSPTTGDRVSLLGYGCMRWPLKP APDGKGEVIDQDAVNGLIDYAIAHGVNYFDTSPAYVQGFSEKSTGIALSRYPRDKYFIATKLSNFSPDTWSREASLKMYH KSFADLQVDYIDYMLLHGIGMGGMDALKGRYLDNGMLDFLIKEREAGRIRNLGFSYHGDIEVYDYLLSRHDEIKWDFVQI QLNYVDWKHAKETNARNTDAEYLYGELHKRGIPSIIMEPLLGGRLSKLNDNLVARLKQRRPESSVASWAFRFAGTFPDIL TVLSGMTYMEHLQDNLRTYSPLEPLTDEEMDFLEDTAQLMLKYPTIPCNDCKYCMPCPYGLDIPAVLLHYNRCVNEGNVP KNGQDENYLKARRAFLVGYDRSVPKLRQASHCIGCNQCVPHCPQNIDIPKELHRIDQFVEQLKQGTL
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI212645785, Length=325, Percent_Identity=25.5384615384615, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24646155, Length=192, Percent_Identity=29.6875, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52912; Mature: 52912
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKNKKDINRRDFIKIVGISAATSTAILYGCSSKGTSSSSSASAEGEIPTDKMTYRTSP CCCCCCCCCCHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCC TTGDRVSLLGYGCMRWPLKPAPDGKGEVIDQDAVNGLIDYAIAHGVNYFDTSPAYVQGFS CCCCEEHEEECHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC EKSTGIALSRYPRDKYFIATKLSNFSPDTWSREASLKMYHKSFADLQVDYIDYMLLHGIG CCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC MGGMDALKGRYLDNGMLDFLIKEREAGRIRNLGFSYHGDIEVYDYLLSRHDEIKWDFVQI CCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEE QLNYVDWKHAKETNARNTDAEYLYGELHKRGIPSIIMEPLLGGRLSKLNDNLVARLKQRR EEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC PESSVASWAFRFAGTFPDILTVLSGMTYMEHLQDNLRTYSPLEPLTDEEMDFLEDTAQLM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LKYPTIPCNDCKYCMPCPYGLDIPAVLLHYNRCVNEGNVPKNGQDENYLKARRAFLVGYD HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECC RSVPKLRQASHCIGCNQCVPHCPQNIDIPKELHRIDQFVEQLKQGTL CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEEKNKKDINRRDFIKIVGISAATSTAILYGCSSKGTSSSSSASAEGEIPTDKMTYRTSP CCCCCCCCCCHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCC TTGDRVSLLGYGCMRWPLKPAPDGKGEVIDQDAVNGLIDYAIAHGVNYFDTSPAYVQGFS CCCCEEHEEECHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC EKSTGIALSRYPRDKYFIATKLSNFSPDTWSREASLKMYHKSFADLQVDYIDYMLLHGIG CCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC MGGMDALKGRYLDNGMLDFLIKEREAGRIRNLGFSYHGDIEVYDYLLSRHDEIKWDFVQI CCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEE QLNYVDWKHAKETNARNTDAEYLYGELHKRGIPSIIMEPLLGGRLSKLNDNLVARLKQRR EEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC PESSVASWAFRFAGTFPDILTVLSGMTYMEHLQDNLRTYSPLEPLTDEEMDFLEDTAQLM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LKYPTIPCNDCKYCMPCPYGLDIPAVLLHYNRCVNEGNVPKNGQDENYLKARRAFLVGYD HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECC RSVPKLRQASHCIGCNQCVPHCPQNIDIPKELHRIDQFVEQLKQGTL CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA