| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346362
Identifier: 29346362
GI number: 29346362
Start: 1161223
End: 1162047
Strand: Reverse
Name: 29346362
Synonym: BT_0952
Alternate gene names: NA
Gene position: 1162047-1161223 (Counterclockwise)
Preceding gene: 29346363
Following gene: 29346361
Centisome position: 18.56
GC content: 35.64
Gene sequence:
>825_bases ATGATTAAAGTAACATACGAAGACCAATTAAACATATCTACCGACCTTATAGAGTATTTATTAGCTCTCATCAAGATTAC CAATAAAGGTTCTGCCTTATTACAGGAACAAGTTGATTATTCAACAGTCTCACAAACAATTGAAGCAATAAGAGAGAATA TTTGTGAATGTGCTCAAAAATACCGAATTGTAAAGGAATTGAATCCTGACATCTTTAAGAATCTACTCAACTGTTATGAC CTTCCCGTTTGTGACCACAAACTAATTCAACTATGTGATTTACTGCTACTCTTCAAGAGAGCGGAAAGTGTTAAGTTTGT GTTAGAAACGAATGACCGTCAAACCTTAAAGGCTGATGAGAAGAGCTTCATTGAGAACGTCATACAAGAGAAACTGTTTC AGTATCTAAAAGAGAAACGTAAGTTAGAAGAGTACACCTCTTTTATTATGTGGACTTCCCCAACTCCTCCTAATAGCTTT ATCTATAAAAAGGATAAGAATATCTATACCTATGCTGCTAATAACCCGCAACCTGTCTCCATTAACAAGAGTAATCTTCA ACAGATAAGAGACAAGGAAATGATGATACTTGAAGATAACTCCATTGCCGTAGTCAATCATTTATATCAAAGATTGATAC AGAGGGGATTCGTCAAACCACTTCCTTCACGTACTCAAGTAGGGACAAAACCTGCCTGCTTTATCTATGACACCCTCATG TTCTTAGGGTATTTCTCCAATGATTATTCCAGTTATGAGAATCAATATCGAATCAACAAGGCTAAGAGAGACCGTATAAA GGAACTAATAAGACCCAACAAATAA
Upstream 100 bases:
>100_bases ATGCAATGAAGAACTTATTATAGTACCTTCAATTAATCCCACTTGTAATTATTGCAGGTGGGATTTTATTTATATATTTG CCCTATAAGGAGATAAAGCC
Downstream 100 bases:
>100_bases GATAATACACCCTGTTTTAAATTGGGGGGAAATTAATTCATAATCCAAATGAATCACCCCAATCTCTCCGCCCTTATATT CAGCTTTCTACCGATATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MIKVTYEDQLNISTDLIEYLLALIKITNKGSALLQEQVDYSTVSQTIEAIRENICECAQKYRIVKELNPDIFKNLLNCYD LPVCDHKLIQLCDLLLLFKRAESVKFVLETNDRQTLKADEKSFIENVIQEKLFQYLKEKRKLEEYTSFIMWTSPTPPNSF IYKKDKNIYTYAANNPQPVSINKSNLQQIRDKEMMILEDNSIAVVNHLYQRLIQRGFVKPLPSRTQVGTKPACFIYDTLM FLGYFSNDYSSYENQYRINKAKRDRIKELIRPNK
Sequences:
>Translated_274_residues MIKVTYEDQLNISTDLIEYLLALIKITNKGSALLQEQVDYSTVSQTIEAIRENICECAQKYRIVKELNPDIFKNLLNCYD LPVCDHKLIQLCDLLLLFKRAESVKFVLETNDRQTLKADEKSFIENVIQEKLFQYLKEKRKLEEYTSFIMWTSPTPPNSF IYKKDKNIYTYAANNPQPVSINKSNLQQIRDKEMMILEDNSIAVVNHLYQRLIQRGFVKPLPSRTQVGTKPACFIYDTLM FLGYFSNDYSSYENQYRINKAKRDRIKELIRPNK >Mature_274_residues MIKVTYEDQLNISTDLIEYLLALIKITNKGSALLQEQVDYSTVSQTIEAIRENICECAQKYRIVKELNPDIFKNLLNCYD LPVCDHKLIQLCDLLLLFKRAESVKFVLETNDRQTLKADEKSFIENVIQEKLFQYLKEKRKLEEYTSFIMWTSPTPPNSF IYKKDKNIYTYAANNPQPVSINKSNLQQIRDKEMMILEDNSIAVVNHLYQRLIQRGFVKPLPSRTQVGTKPACFIYDTLM FLGYFSNDYSSYENQYRINKAKRDRIKELIRPNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32258; Mature: 32258
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVTYEDQLNISTDLIEYLLALIKITNKGSALLQEQVDYSTVSQTIEAIRENICECAQK CEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRIVKELNPDIFKNLLNCYDLPVCDHKLIQLCDLLLLFKRAESVKFVLETNDRQTLKADE HHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH KSFIENVIQEKLFQYLKEKRKLEEYTSFIMWTSPTPPNSFIYKKDKNIYTYAANNPQPVS HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECCCEEEEECCCCCCCC INKSNLQQIRDKEMMILEDNSIAVVNHLYQRLIQRGFVKPLPSRTQVGTKPACFIYDTLM CCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH FLGYFSNDYSSYENQYRINKAKRDRIKELIRPNK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKVTYEDQLNISTDLIEYLLALIKITNKGSALLQEQVDYSTVSQTIEAIRENICECAQK CEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRIVKELNPDIFKNLLNCYDLPVCDHKLIQLCDLLLLFKRAESVKFVLETNDRQTLKADE HHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH KSFIENVIQEKLFQYLKEKRKLEEYTSFIMWTSPTPPNSFIYKKDKNIYTYAANNPQPVS HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECCCEEEEECCCCCCCC INKSNLQQIRDKEMMILEDNSIAVVNHLYQRLIQRGFVKPLPSRTQVGTKPACFIYDTLM CCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH FLGYFSNDYSSYENQYRINKAKRDRIKELIRPNK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA