Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346361

Identifier: 29346361

GI number: 29346361

Start: 1160570

End: 1161049

Strand: Reverse

Name: 29346361

Synonym: BT_0951

Alternate gene names: NA

Gene position: 1161049-1160570 (Counterclockwise)

Preceding gene: 29346362

Following gene: 29346360

Centisome position: 18.55

GC content: 41.88

Gene sequence:

>480_bases
ATGGCAACATTTAATTTAAATGGTTTGGGCACGCCTAAAAGTGCAACCTACGATAATGAGAGTGCGTATAGAGAATTACT
CTCAAGAGTGAATAACGGTGAATCCATTGTGGTTAGTGTCTACACGGACAAAGACAATTATCCGGCATTCGGCATCGAAA
CCAAGAAAGTAGCCCGTTTCAAGGTTAGAGTGAATCAGTCTCTTCTTAGTCTGCTTGTTGGCTACCTTAATAATAGTACA
GTAAATGAGGACACGGTAAGAGCAAATGAGGTAGAGCCTAATGAAGAGGGCCAGGACTTCACAACTGACCTGTTCAAACT
TCTGATTGATGAAGGATTCACACCCCAAATCGCTCCACTGTTCCGAACCGTTTACGGTTATGTAAATGCGGTGTTCAACT
TCCCTAATGGAAGAATGTACTTCCGCCTTGAACATACCGATGAACTAATGGACTATTTGGCAGATAAGAAACTGCTTTAA

Upstream 100 bases:

>100_bases
TTATATTCAGCTTTCTACCGATATTTGCATCGTAATTCAGAGACAAGCGGTGCACCACTCTCGATTACATTATTTATTAA
CTTTAATTAAATTAAGCTTT

Downstream 100 bases:

>100_bases
TCAAACCAAAGGAGAGAGTTTACCGGTAGCTCTCTCCCCTATTTCTCAAACCTGTAATTTTAAAGATATATCATTATGGT
AACTAAAGCTATTAAACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MATFNLNGLGTPKSATYDNESAYRELLSRVNNGESIVVSVYTDKDNYPAFGIETKKVARFKVRVNQSLLSLLVGYLNNST
VNEDTVRANEVEPNEEGQDFTTDLFKLLIDEGFTPQIAPLFRTVYGYVNAVFNFPNGRMYFRLEHTDELMDYLADKKLL

Sequences:

>Translated_159_residues
MATFNLNGLGTPKSATYDNESAYRELLSRVNNGESIVVSVYTDKDNYPAFGIETKKVARFKVRVNQSLLSLLVGYLNNST
VNEDTVRANEVEPNEEGQDFTTDLFKLLIDEGFTPQIAPLFRTVYGYVNAVFNFPNGRMYFRLEHTDELMDYLADKKLL
>Mature_158_residues
ATFNLNGLGTPKSATYDNESAYRELLSRVNNGESIVVSVYTDKDNYPAFGIETKKVARFKVRVNQSLLSLLVGYLNNSTV
NEDTVRANEVEPNEEGQDFTTDLFKLLIDEGFTPQIAPLFRTVYGYVNAVFNFPNGRMYFRLEHTDELMDYLADKKLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18084; Mature: 17952

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFNLNGLGTPKSATYDNESAYRELLSRVNNGESIVVSVYTDKDNYPAFGIETKKVARF
CCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHH
KVRVNQSLLSLLVGYLNNSTVNEDTVRANEVEPNEEGQDFTTDLFKLLIDEGFTPQIAPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
FRTVYGYVNAVFNFPNGRMYFRLEHTDELMDYLADKKLL
HHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATFNLNGLGTPKSATYDNESAYRELLSRVNNGESIVVSVYTDKDNYPAFGIETKKVARF
CEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHH
KVRVNQSLLSLLVGYLNNSTVNEDTVRANEVEPNEEGQDFTTDLFKLLIDEGFTPQIAPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
FRTVYGYVNAVFNFPNGRMYFRLEHTDELMDYLADKKLL
HHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA