Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346360

Identifier: 29346360

GI number: 29346360

Start: 1158701

End: 1160494

Strand: Reverse

Name: 29346360

Synonym: BT_0950

Alternate gene names: NA

Gene position: 1160494-1158701 (Counterclockwise)

Preceding gene: 29346361

Following gene: 29346359

Centisome position: 18.54

GC content: 36.68

Gene sequence:

>1794_bases
ATGGTAACTAAAGCTATTAAACTATATAAAACTAAAGGCGACAAGATACCCTATTTGACCACTATTCTTGAAGAGATACC
GACCGATACGATTTTATGTAAAACTCTGACAGGATTGGGTGCGACTTATGGTGAAATCAAAGCCAAACGCCATTCTATAA
TAATTCAACCGAACGTATCGACTATCCAATGCAAATGCAATGACCCCAAGCATACTCACGATAATCTGATAGGAGTGATT
GATAAGGTTGGAGTAGATGATGTCAAGGAGTACATTCTTGCTTCCAAAGATAAGTACTGCAAATTCCTAGTAACCCCCGA
ATCATTTCATAAGGTAAAGAAGGCATTTGAAGAACTGGATATGTATATGTACAGTGAATGCTTCATGTTGATAGACGAAT
CACATAAACTTGTGAAGGATGCGGATTACAGAGAAGGCATTTATCTACCACTGGACGACTTCTTCCAATTCAAAGGTAAA
GCACTGGTATCTGCCACACCTCTTGAACTATCAGACCCACGATTCAATGACTTCCAGAGATTAGTAATTGAACCACAGTT
CTCCTATGACAAGGATATACACATTCAATACACCAACAACACACTGGAACGATTCAAGGTAACAGTAAGGGATTCAAAGA
ACGATTGCATCTGCGTATTCCTTAATTCCACAGATACTATCTATGCTCTCATGGAGAAGACAGGCATACTTGAAGAATCA
ACAGTATTCTGTGCAAACAAGAGTGTTCGAAAACTAAAGTACTCTCTTAACTTCAAGAACGCCTATTCAAGGTTTGAGCC
TAAACGGATGAGGAAGTTTAATTTCTTTACAAGTAGGTTTTATGCAGGTATGGATATAGAATTGGAATGTAAACCGGATT
TAATCATGCTGTCCGATGTAAATTTAGTTGAACACACTGTATTAGACCCTTATTCTGATATGATACAGATAGTTGGCAGA
TTCAGAAACGGTGTCAATTACATTACACATATAACTAACACATTCACCGATTATACATATAGAAGTAAGGAGGAAGTATT
GCGTGAAGTGGAGATTTATGAAATCAATTATAACTTTATACGAAGAGAACTAGGTAACGCCATTGATAATGGAAGTCAAT
GTGCATTTCGTACTTTGCTAAAGACCTCTCCATTCAATCAATTCCTAGACAGACACAATAATAAATCCTATTGTGCGGTT
GATAACTATGTAGATGAGGTAATGGTAAGAAATATGTATTTAAGTGAAGATACCTTATTTACAACCTATACCGATGAAGT
GCTGATGAAGTATTTCTCCGCATTTAGAGCTTCTTATTTATATAAAGCAGGTAATATTGAATGGTTACAACTTCGTAATG
CTAATAAGTCTATTGTGTCTAAACGGAAGGTGATAGTTGATATATTGGAGAAGATTCTACCTTATGAAACGGAATCCGAT
TACGAGTTTAGAAAGGACATTTATAAATCTGACCCTCTGATAGTGGAAGCTGTTGAAATCCTGGGTATCGAAGAAGTACG
TAGACTTCGATATATTACAAATGCCTTAAAATTGGAAATTTATAAGGCCAAATGTCAATCACCACAAGTAACAGAATTAA
TACACGATTACTTCAAAGTTGGCGGTAGATACTTGTTGACCGATATTAAGACTACAATCAAGCGGATTTATGAAGAATGT
GGTATCGCCCCACAAGAACGGGTCACAGCACAGACCTTACGTAACTACTTTAACTGTGACCGAGCCACTCCTAAAGGTAA
GGAAGGTTTATTAATAGTCAGTGTACTCAATTAA

Upstream 100 bases:

>100_bases
TTTGGCAGATAAGAAACTGCTTTAATCAAACCAAAGGAGAGAGTTTACCGGTAGCTCTCTCCCCTATTTCTCAAACCTGT
AATTTTAAAGATATATCATT

Downstream 100 bases:

>100_bases
TAAGGACTGGGGAAATTTGGCAGATGTCCACTTTATAGACCCTCCTTCAGAAATACCAGTCTCTCGGAATCAACTGTCTT
CATGTGTTCATAATGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVSTIQCKCNDPKHTHDNLIGVI
DKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELDMYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGK
ALVSATPLELSDPRFNDFQRLVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES
TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDVNLVEHTVLDPYSDMIQIVGR
FRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFIRRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAV
DNYVDEVMVRNMYLSEDTLFTTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD
YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKVGGRYLLTDIKTTIKRIYEEC
GIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN

Sequences:

>Translated_597_residues
MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVSTIQCKCNDPKHTHDNLIGVI
DKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELDMYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGK
ALVSATPLELSDPRFNDFQRLVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES
TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDVNLVEHTVLDPYSDMIQIVGR
FRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFIRRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAV
DNYVDEVMVRNMYLSEDTLFTTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD
YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKVGGRYLLTDIKTTIKRIYEEC
GIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN
>Mature_597_residues
MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVSTIQCKCNDPKHTHDNLIGVI
DKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELDMYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGK
ALVSATPLELSDPRFNDFQRLVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES
TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDVNLVEHTVLDPYSDMIQIVGR
FRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFIRRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAV
DNYVDEVMVRNMYLSEDTLFTTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD
YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKVGGRYLLTDIKTTIKRIYEEC
GIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69665; Mature: 69665

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVS
CCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEEECCCC
TIQCKCNDPKHTHDNLIGVIDKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELD
EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
MYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGKALVSATPLELSDPRFNDFQR
HHHHHHHHHHHCCCCHHHHCCCCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCCCCCEE
LVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES
EEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCC
TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDV
EEEECCCCHHHEEEEECHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECC
NLVEHTVLDPYSDMIQIVGRFRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFI
CHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCEEEEEECHHHH
RRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAVDNYVDEVMVRNMYLSEDTLF
HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHEECCCCEE
TTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD
EEEHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKV
HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEHHCCCCHHHHHHHHHHHH
GGRYLLTDIKTTIKRIYEECGIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN
CCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVS
CCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEEECCCC
TIQCKCNDPKHTHDNLIGVIDKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELD
EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
MYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGKALVSATPLELSDPRFNDFQR
HHHHHHHHHHHCCCCHHHHCCCCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCCCCCEE
LVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES
EEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCC
TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDV
EEEECCCCHHHEEEEECHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECC
NLVEHTVLDPYSDMIQIVGRFRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFI
CHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCEEEEEECHHHH
RRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAVDNYVDEVMVRNMYLSEDTLF
HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHEECCCCEE
TTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD
EEEHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKV
HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEHHCCCCHHHHHHHHHHHH
GGRYLLTDIKTTIKRIYEECGIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN
CCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA