| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346360
Identifier: 29346360
GI number: 29346360
Start: 1158701
End: 1160494
Strand: Reverse
Name: 29346360
Synonym: BT_0950
Alternate gene names: NA
Gene position: 1160494-1158701 (Counterclockwise)
Preceding gene: 29346361
Following gene: 29346359
Centisome position: 18.54
GC content: 36.68
Gene sequence:
>1794_bases ATGGTAACTAAAGCTATTAAACTATATAAAACTAAAGGCGACAAGATACCCTATTTGACCACTATTCTTGAAGAGATACC GACCGATACGATTTTATGTAAAACTCTGACAGGATTGGGTGCGACTTATGGTGAAATCAAAGCCAAACGCCATTCTATAA TAATTCAACCGAACGTATCGACTATCCAATGCAAATGCAATGACCCCAAGCATACTCACGATAATCTGATAGGAGTGATT GATAAGGTTGGAGTAGATGATGTCAAGGAGTACATTCTTGCTTCCAAAGATAAGTACTGCAAATTCCTAGTAACCCCCGA ATCATTTCATAAGGTAAAGAAGGCATTTGAAGAACTGGATATGTATATGTACAGTGAATGCTTCATGTTGATAGACGAAT CACATAAACTTGTGAAGGATGCGGATTACAGAGAAGGCATTTATCTACCACTGGACGACTTCTTCCAATTCAAAGGTAAA GCACTGGTATCTGCCACACCTCTTGAACTATCAGACCCACGATTCAATGACTTCCAGAGATTAGTAATTGAACCACAGTT CTCCTATGACAAGGATATACACATTCAATACACCAACAACACACTGGAACGATTCAAGGTAACAGTAAGGGATTCAAAGA ACGATTGCATCTGCGTATTCCTTAATTCCACAGATACTATCTATGCTCTCATGGAGAAGACAGGCATACTTGAAGAATCA ACAGTATTCTGTGCAAACAAGAGTGTTCGAAAACTAAAGTACTCTCTTAACTTCAAGAACGCCTATTCAAGGTTTGAGCC TAAACGGATGAGGAAGTTTAATTTCTTTACAAGTAGGTTTTATGCAGGTATGGATATAGAATTGGAATGTAAACCGGATT TAATCATGCTGTCCGATGTAAATTTAGTTGAACACACTGTATTAGACCCTTATTCTGATATGATACAGATAGTTGGCAGA TTCAGAAACGGTGTCAATTACATTACACATATAACTAACACATTCACCGATTATACATATAGAAGTAAGGAGGAAGTATT GCGTGAAGTGGAGATTTATGAAATCAATTATAACTTTATACGAAGAGAACTAGGTAACGCCATTGATAATGGAAGTCAAT GTGCATTTCGTACTTTGCTAAAGACCTCTCCATTCAATCAATTCCTAGACAGACACAATAATAAATCCTATTGTGCGGTT GATAACTATGTAGATGAGGTAATGGTAAGAAATATGTATTTAAGTGAAGATACCTTATTTACAACCTATACCGATGAAGT GCTGATGAAGTATTTCTCCGCATTTAGAGCTTCTTATTTATATAAAGCAGGTAATATTGAATGGTTACAACTTCGTAATG CTAATAAGTCTATTGTGTCTAAACGGAAGGTGATAGTTGATATATTGGAGAAGATTCTACCTTATGAAACGGAATCCGAT TACGAGTTTAGAAAGGACATTTATAAATCTGACCCTCTGATAGTGGAAGCTGTTGAAATCCTGGGTATCGAAGAAGTACG TAGACTTCGATATATTACAAATGCCTTAAAATTGGAAATTTATAAGGCCAAATGTCAATCACCACAAGTAACAGAATTAA TACACGATTACTTCAAAGTTGGCGGTAGATACTTGTTGACCGATATTAAGACTACAATCAAGCGGATTTATGAAGAATGT GGTATCGCCCCACAAGAACGGGTCACAGCACAGACCTTACGTAACTACTTTAACTGTGACCGAGCCACTCCTAAAGGTAA GGAAGGTTTATTAATAGTCAGTGTACTCAATTAA
Upstream 100 bases:
>100_bases TTTGGCAGATAAGAAACTGCTTTAATCAAACCAAAGGAGAGAGTTTACCGGTAGCTCTCTCCCCTATTTCTCAAACCTGT AATTTTAAAGATATATCATT
Downstream 100 bases:
>100_bases TAAGGACTGGGGAAATTTGGCAGATGTCCACTTTATAGACCCTCCTTCAGAAATACCAGTCTCTCGGAATCAACTGTCTT CATGTGTTCATAATGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVSTIQCKCNDPKHTHDNLIGVI DKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELDMYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGK ALVSATPLELSDPRFNDFQRLVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDVNLVEHTVLDPYSDMIQIVGR FRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFIRRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAV DNYVDEVMVRNMYLSEDTLFTTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKVGGRYLLTDIKTTIKRIYEEC GIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN
Sequences:
>Translated_597_residues MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVSTIQCKCNDPKHTHDNLIGVI DKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELDMYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGK ALVSATPLELSDPRFNDFQRLVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDVNLVEHTVLDPYSDMIQIVGR FRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFIRRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAV DNYVDEVMVRNMYLSEDTLFTTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKVGGRYLLTDIKTTIKRIYEEC GIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN >Mature_597_residues MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVSTIQCKCNDPKHTHDNLIGVI DKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELDMYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGK ALVSATPLELSDPRFNDFQRLVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDVNLVEHTVLDPYSDMIQIVGR FRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFIRRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAV DNYVDEVMVRNMYLSEDTLFTTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKVGGRYLLTDIKTTIKRIYEEC GIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69665; Mature: 69665
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVS CCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEEECCCC TIQCKCNDPKHTHDNLIGVIDKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELD EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH MYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGKALVSATPLELSDPRFNDFQR HHHHHHHHHHHCCCCHHHHCCCCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCCCCCEE LVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES EEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCC TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDV EEEECCCCHHHEEEEECHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECC NLVEHTVLDPYSDMIQIVGRFRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFI CHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCEEEEEECHHHH RRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAVDNYVDEVMVRNMYLSEDTLF HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHEECCCCEE TTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD EEEHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKV HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEHHCCCCHHHHHHHHHHHH GGRYLLTDIKTTIKRIYEECGIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN CCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MVTKAIKLYKTKGDKIPYLTTILEEIPTDTILCKTLTGLGATYGEIKAKRHSIIIQPNVS CCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCEEEEECCCC TIQCKCNDPKHTHDNLIGVIDKVGVDDVKEYILASKDKYCKFLVTPESFHKVKKAFEELD EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH MYMYSECFMLIDESHKLVKDADYREGIYLPLDDFFQFKGKALVSATPLELSDPRFNDFQR HHHHHHHHHHHCCCCHHHHCCCCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCCCCCEE LVIEPQFSYDKDIHIQYTNNTLERFKVTVRDSKNDCICVFLNSTDTIYALMEKTGILEES EEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCC TVFCANKSVRKLKYSLNFKNAYSRFEPKRMRKFNFFTSRFYAGMDIELECKPDLIMLSDV EEEECCCCHHHEEEEECHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECC NLVEHTVLDPYSDMIQIVGRFRNGVNYITHITNTFTDYTYRSKEEVLREVEIYEINYNFI CHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCEEEEEECHHHH RRELGNAIDNGSQCAFRTLLKTSPFNQFLDRHNNKSYCAVDNYVDEVMVRNMYLSEDTLF HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHEECCCCEE TTYTDEVLMKYFSAFRASYLYKAGNIEWLQLRNANKSIVSKRKVIVDILEKILPYETESD EEEHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC YEFRKDIYKSDPLIVEAVEILGIEEVRRLRYITNALKLEIYKAKCQSPQVTELIHDYFKV HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEHHCCCCHHHHHHHHHHHH GGRYLLTDIKTTIKRIYEECGIAPQERVTAQTLRNYFNCDRATPKGKEGLLIVSVLN CCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA