Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is yhiM [H]

Identifier: 29346215

GI number: 29346215

Start: 995222

End: 996271

Strand: Reverse

Name: yhiM [H]

Synonym: BT_0805

Alternate gene names: 29346215

Gene position: 996271-995222 (Counterclockwise)

Preceding gene: 29346221

Following gene: 29346205

Centisome position: 15.91

GC content: 46.0

Gene sequence:

>1050_bases
ATGAATTACGGTATTAGTATTTTATTCAGAGCAATCCCTTTGACGATGGCGGTCTTTTGCTTCGGATACGGAGCATTCAT
TTACGGTTATGGTGACGCGGGAAACCGTCTGGTGGCAGGTCCTGTTGTATTTTCACTAGGTATGATATGCATTGCGCTGT
TCTGTACGGCAGCCACTATAATCCGGCAAATCATACATACCTATAATGAAGCTACAAAATACGTTTTACCTGTTGTGGGC
TATCTGGCAGCTATCATAACGATTGTCGGAGGTATCTGCATTTTCAATGCCGCTACCACTACTTCAGCCTTCGTCGCAGG
GCATGTCATAACCGGTGTAGGATTTATCACAGCTTGTGTAGCTACCGCCGCTACCTCTTCCACCCGATTTTCTTTGATTC
CGGCCAATGCCAAAGCTACCGGAAATGAAGTGCCGGAGGGAGCGTTTTCTATTGGCCAGAGACGGGCAATGATCATTCTC
GCAATCGTCATTTCCTGTATCGCATGGATATGGGCGTTCATCCTGTTAAGCAACAGTCACTCTCATCCTGCTTATTTTGT
AGCAGGTCATGTGATGGTAGGGCTCGCATGTATTTGTACCAGTCTGATTGCATTGGTAGCAACCATAGCCCGTCAGGTCC
GGAACGACTATTCGGAAAGAGAACGTAACAAATGGCCGAAACTGGTTTTATTAATGGGATCGATCTCTTTTGTATGGGGC
ATATTCGTCATCCTTGCCGATTCAGGAAGTGCAAACGGTACTACCGGATACATCATGCTTGGTCTTGGCCTGGTATGTTA
CAGTATTTCCAGCAAAGTGATTCTACTCGCCAAGATATGGAGGCGGGAGTTCAAACTGGCTAACCGAATCCCTATGATTC
CGGTACTGACAGCATTAGCATGCCTGTTTCTGGCTGCCTTTGTATTCGAGCTTGCTACCGTAAACGCTGATTATTTTATT
CCGGCACGAGTTTTAGTAGGACTGGGAGCTATTTGCTTCACGCTGTTTTCTATCGTCAGCATATTGGAAAGCGGCACATC
TTCTAAATAA

Upstream 100 bases:

>100_bases
TTAATTGGAATCATGTGAAGTTATCGTTTATAAATGGATGTTGCGTTAAACAAAACGGATATCTCCTTGTTTTAGTGGGA
AAATAAAAAGCACTTAAGTT

Downstream 100 bases:

>100_bases
TAGAAAAGTCATGTCTCAAAGGTATATGTTTACTCTCTTTTAGGCACAGATTACACGGATTTCACAGTTTTTGCTATAAA
TGAATGTCTTTAGAACCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATIIRQIIHTYNEATKYVLPVVG
YLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACVATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIIL
AIVISCIAWIWAFILLSNSHSHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG
IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALACLFLAAFVFELATVNADYFI
PARVLVGLGAICFTLFSIVSILESGTSSK

Sequences:

>Translated_349_residues
MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATIIRQIIHTYNEATKYVLPVVG
YLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACVATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIIL
AIVISCIAWIWAFILLSNSHSHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG
IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALACLFLAAFVFELATVNADYFI
PARVLVGLGAICFTLFSIVSILESGTSSK
>Mature_349_residues
MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATIIRQIIHTYNEATKYVLPVVG
YLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACVATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIIL
AIVISCIAWIWAFILLSNSHSHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG
IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALACLFLAAFVFELATVNADYFI
PARVLVGLGAICFTLFSIVSILESGTSSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510980, Length=351, Percent_Identity=46.7236467236467, Blast_Score=290, Evalue=8e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021240 [H]

Pfam domain/function: PF10951 DUF2776 [H]

EC number: NA

Molecular weight: Translated: 37262; Mature: 37262

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATI
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
IRQIIHTYNEATKYVLPVVGYLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIILAIVISCIAWIWAFILLSNSH
HHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALA
HHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
CLFLAAFVFELATVNADYFIPARVLVGLGAICFTLFSIVSILESGTSSK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATI
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
IRQIIHTYNEATKYVLPVVGYLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIILAIVISCIAWIWAFILLSNSH
HHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALA
HHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
CLFLAAFVFELATVNADYFIPARVLVGLGAICFTLFSIVSILESGTSSK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]