| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yhiM [H]
Identifier: 29346215
GI number: 29346215
Start: 995222
End: 996271
Strand: Reverse
Name: yhiM [H]
Synonym: BT_0805
Alternate gene names: 29346215
Gene position: 996271-995222 (Counterclockwise)
Preceding gene: 29346221
Following gene: 29346205
Centisome position: 15.91
GC content: 46.0
Gene sequence:
>1050_bases ATGAATTACGGTATTAGTATTTTATTCAGAGCAATCCCTTTGACGATGGCGGTCTTTTGCTTCGGATACGGAGCATTCAT TTACGGTTATGGTGACGCGGGAAACCGTCTGGTGGCAGGTCCTGTTGTATTTTCACTAGGTATGATATGCATTGCGCTGT TCTGTACGGCAGCCACTATAATCCGGCAAATCATACATACCTATAATGAAGCTACAAAATACGTTTTACCTGTTGTGGGC TATCTGGCAGCTATCATAACGATTGTCGGAGGTATCTGCATTTTCAATGCCGCTACCACTACTTCAGCCTTCGTCGCAGG GCATGTCATAACCGGTGTAGGATTTATCACAGCTTGTGTAGCTACCGCCGCTACCTCTTCCACCCGATTTTCTTTGATTC CGGCCAATGCCAAAGCTACCGGAAATGAAGTGCCGGAGGGAGCGTTTTCTATTGGCCAGAGACGGGCAATGATCATTCTC GCAATCGTCATTTCCTGTATCGCATGGATATGGGCGTTCATCCTGTTAAGCAACAGTCACTCTCATCCTGCTTATTTTGT AGCAGGTCATGTGATGGTAGGGCTCGCATGTATTTGTACCAGTCTGATTGCATTGGTAGCAACCATAGCCCGTCAGGTCC GGAACGACTATTCGGAAAGAGAACGTAACAAATGGCCGAAACTGGTTTTATTAATGGGATCGATCTCTTTTGTATGGGGC ATATTCGTCATCCTTGCCGATTCAGGAAGTGCAAACGGTACTACCGGATACATCATGCTTGGTCTTGGCCTGGTATGTTA CAGTATTTCCAGCAAAGTGATTCTACTCGCCAAGATATGGAGGCGGGAGTTCAAACTGGCTAACCGAATCCCTATGATTC CGGTACTGACAGCATTAGCATGCCTGTTTCTGGCTGCCTTTGTATTCGAGCTTGCTACCGTAAACGCTGATTATTTTATT CCGGCACGAGTTTTAGTAGGACTGGGAGCTATTTGCTTCACGCTGTTTTCTATCGTCAGCATATTGGAAAGCGGCACATC TTCTAAATAA
Upstream 100 bases:
>100_bases TTAATTGGAATCATGTGAAGTTATCGTTTATAAATGGATGTTGCGTTAAACAAAACGGATATCTCCTTGTTTTAGTGGGA AAATAAAAAGCACTTAAGTT
Downstream 100 bases:
>100_bases TAGAAAAGTCATGTCTCAAAGGTATATGTTTACTCTCTTTTAGGCACAGATTACACGGATTTCACAGTTTTTGCTATAAA TGAATGTCTTTAGAACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATIIRQIIHTYNEATKYVLPVVG YLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACVATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIIL AIVISCIAWIWAFILLSNSHSHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALACLFLAAFVFELATVNADYFI PARVLVGLGAICFTLFSIVSILESGTSSK
Sequences:
>Translated_349_residues MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATIIRQIIHTYNEATKYVLPVVG YLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACVATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIIL AIVISCIAWIWAFILLSNSHSHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALACLFLAAFVFELATVNADYFI PARVLVGLGAICFTLFSIVSILESGTSSK >Mature_349_residues MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATIIRQIIHTYNEATKYVLPVVG YLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACVATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIIL AIVISCIAWIWAFILLSNSHSHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALACLFLAAFVFELATVNADYFI PARVLVGLGAICFTLFSIVSILESGTSSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510980, Length=351, Percent_Identity=46.7236467236467, Blast_Score=290, Evalue=8e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021240 [H]
Pfam domain/function: PF10951 DUF2776 [H]
EC number: NA
Molecular weight: Translated: 37262; Mature: 37262
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATI CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHH IRQIIHTYNEATKYVLPVVGYLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIILAIVISCIAWIWAFILLSNSH HHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALA HHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH CLFLAAFVFELATVNADYFIPARVLVGLGAICFTLFSIVSILESGTSSK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNYGISILFRAIPLTMAVFCFGYGAFIYGYGDAGNRLVAGPVVFSLGMICIALFCTAATI CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHH IRQIIHTYNEATKYVLPVVGYLAAIITIVGGICIFNAATTTSAFVAGHVITGVGFITACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ATAATSSTRFSLIPANAKATGNEVPEGAFSIGQRRAMIILAIVISCIAWIWAFILLSNSH HHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SHPAYFVAGHVMVGLACICTSLIALVATIARQVRNDYSERERNKWPKLVLLMGSISFVWG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRREFKLANRIPMIPVLTALA HHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH CLFLAAFVFELATVNADYFIPARVLVGLGAICFTLFSIVSILESGTSSK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]