| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346205
Identifier: 29346205
GI number: 29346205
Start: 986000
End: 986620
Strand: Reverse
Name: 29346205
Synonym: BT_0795
Alternate gene names: NA
Gene position: 986620-986000 (Counterclockwise)
Preceding gene: 29346215
Following gene: 29346200
Centisome position: 15.76
GC content: 42.03
Gene sequence:
>621_bases ATGAATGCACTTTATGATTTCTTCCTGACTCCCCAACCTAAAGATTCCAATAAAACGAGATATCATGCCCGACTGGTTGT ACGGGACACCATCACACTGGAAGATATAGCCGAAACGATTGAGTCCAGAAGTAGTTTAAGACAAAGCGACGTAATAGGGT CTTTTATAGAGTTTGCCAATGTTTTCAAACAAGAATTATCCAACGGGAATAGTATTCACATTCCGGGAGTCGGTTCATTC CGTATCAAAGCGGAATCACCCGAAGTACGTTCTCCCAAAGAAATCCGTGCCGAAAATATTCATTGCAGTGGAATCGTTTT TACTCCGGAAAAAGATTTGCTTCGCGAATTAAAGGCTACAACTTTTGAAAAGGTCAGTGAGACCCGCAGGTCACAGGAAT TGAGCGATATAGAAATAGATGGGAGATTAGCTGAATTTTTCAAAGATAACTCTTGTATTACCACACAGCAGCTTTGTTCA TTATGTGGACTTCGAAAAGCCACTGCACTCCGCAGATTACAAAAGCGGGTGGATGAAGGAAAGCTGACTCATCCGGGCTA TATCCGTTCTCCTTTTTATTTTCCTGTGCCGGGATGGTTCGGAGTATCCAGAAATAGATAA
Upstream 100 bases:
>100_bases TAGCTGTTGCACATAATGTGAGCCAATCAATAGAAAGGCACGAAATAAATAAAATGACTGCGTAAGTCTGCTAATTGATA CGCACAAAACAACTAAAGCA
Downstream 100 bases:
>100_bases TGCAAAATAAACCACTGATTCACAGATTATAATATCCATATATGATTATGACACCATACAATTTGCATGATGTCATAATC TGAATAATCTCACGTCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNALYDFFLTPQPKDSNKTRYHARLVVRDTITLEDIAETIESRSSLRQSDVIGSFIEFANVFKQELSNGNSIHIPGVGSF RIKAESPEVRSPKEIRAENIHCSGIVFTPEKDLLRELKATTFEKVSETRRSQELSDIEIDGRLAEFFKDNSCITTQQLCS LCGLRKATALRRLQKRVDEGKLTHPGYIRSPFYFPVPGWFGVSRNR
Sequences:
>Translated_206_residues MNALYDFFLTPQPKDSNKTRYHARLVVRDTITLEDIAETIESRSSLRQSDVIGSFIEFANVFKQELSNGNSIHIPGVGSF RIKAESPEVRSPKEIRAENIHCSGIVFTPEKDLLRELKATTFEKVSETRRSQELSDIEIDGRLAEFFKDNSCITTQQLCS LCGLRKATALRRLQKRVDEGKLTHPGYIRSPFYFPVPGWFGVSRNR >Mature_206_residues MNALYDFFLTPQPKDSNKTRYHARLVVRDTITLEDIAETIESRSSLRQSDVIGSFIEFANVFKQELSNGNSIHIPGVGSF RIKAESPEVRSPKEIRAENIHCSGIVFTPEKDLLRELKATTFEKVSETRRSQELSDIEIDGRLAEFFKDNSCITTQQLCS LCGLRKATALRRLQKRVDEGKLTHPGYIRSPFYFPVPGWFGVSRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23514; Mature: 23514
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALYDFFLTPQPKDSNKTRYHARLVVRDTITLEDIAETIESRSSLRQSDVIGSFIEFAN CCCCEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFKQELSNGNSIHIPGVGSFRIKAESPEVRSPKEIRAENIHCSGIVFTPEKDLLRELKAT HHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHCCEEECEEEECCCHHHHHHHHHH TFEKVSETRRSQELSDIEIDGRLAEFFKDNSCITTQQLCSLCGLRKATALRRLQKRVDEG HHHHHHHHHHHHCCCCCEECHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC KLTHPGYIRSPFYFPVPGWFGVSRNR CCCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MNALYDFFLTPQPKDSNKTRYHARLVVRDTITLEDIAETIESRSSLRQSDVIGSFIEFAN CCCCEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFKQELSNGNSIHIPGVGSFRIKAESPEVRSPKEIRAENIHCSGIVFTPEKDLLRELKAT HHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHCCEEECEEEECCCHHHHHHHHHH TFEKVSETRRSQELSDIEIDGRLAEFFKDNSCITTQQLCSLCGLRKATALRRLQKRVDEG HHHHHHHHHHHHCCCCCEECHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC KLTHPGYIRSPFYFPVPGWFGVSRNR CCCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA