| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is thiS [C]
Identifier: 29346063
GI number: 29346063
Start: 803419
End: 803619
Strand: Reverse
Name: thiS [C]
Synonym: BT_0653
Alternate gene names: 29346063
Gene position: 803619-803419 (Counterclockwise)
Preceding gene: 29346064
Following gene: 29346062
Centisome position: 12.84
GC content: 45.77
Gene sequence:
>201_bases ATGAAAGTACAAGTTAACAACAAAGAGGTGGAAATGACTCCTGCTTCTACCCTTACACAACTGGCTGCCCAACTGGAACT TCCGGTACAAGGCATCGCTATTGCCGTAAACAACAAAATGATTCCACGTTCCGAATGGGAGAAATTCGCGTTACAGGAGA ATGATAACCTCGTGGTCATCAAAGCGGCTTGTGGAGGGTAA
Upstream 100 bases:
>100_bases GCAGTTAGCACTGACGTAGGGATTGTGTTTCTTTCTTATCGCCTTTCTATATAAGCACGCTCTTTGTATTTACTTTCAAC TTATTAATACTGATAGGACA
Downstream 100 bases:
>100_bases AAGTATGGTCAGTCTACAATTTATCACCCACCAGACCGATCGGTATACTTATTTCGAATCGGCACTCATGGCACTTGAAG GAGGATGTAAGTGGATTCAG
Product: thiS protein, involved in thiamine biosynthesis
Products: NA
Alternate protein names: ThiS Protein Involved In Thiamine Biosynthesis
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MKVQVNNKEVEMTPASTLTQLAAQLELPVQGIAIAVNNKMIPRSEWEKFALQENDNLVVIKAACGG
Sequences:
>Translated_66_residues MKVQVNNKEVEMTPASTLTQLAAQLELPVQGIAIAVNNKMIPRSEWEKFALQENDNLVVIKAACGG >Mature_66_residues MKVQVNNKEVEMTPASTLTQLAAQLELPVQGIAIAVNNKMIPRSEWEKFALQENDNLVVIKAACGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7194; Mature: 7194
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVQVNNKEVEMTPASTLTQLAAQLELPVQGIAIAVNNKMIPRSEWEKFALQENDNLVVI CEEECCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEE KAACGG EECCCC >Mature Secondary Structure MKVQVNNKEVEMTPASTLTQLAAQLELPVQGIAIAVNNKMIPRSEWEKFALQENDNLVVI CEEECCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEE KAACGG EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA