| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345924
Identifier: 29345924
GI number: 29345924
Start: 636473
End: 637477
Strand: Reverse
Name: 29345924
Synonym: BT_0514
Alternate gene names: NA
Gene position: 637477-636473 (Counterclockwise)
Preceding gene: 29345925
Following gene: 29345923
Centisome position: 10.18
GC content: 33.63
Gene sequence:
>1005_bases ATGAACAGAATATTTGAAATAGAAGAATTAAACGAACTTGAAGTTTTTTTGAAATCTCAAAATGATATTGACAAATTGCG AGATAGTTTATTCGCTGAATTTCTTAAATATGCGGATTACAAAAATGTAGAAGAGTGGAATAATGCAGTTCGGGTTTGCG AGAGTTTGGCAATCATAGGTTGGGGATCTAATGAGGCCCTTGAGGCATTAAGAGGCTCTTTCTTTAATGGAAACCCGATG ACTTGCTTTGTCAATAAACACAGAGAGCCTCGTTTCGTCGAAGCCATTTGGTCAAGAAGAATAAACGGATTTACCATGGA AGCAGGAAGGACAAGTTATCATTTCAGCCCGGATGATCCCTTTCAGAGGCAATCCATAGCATGGGAATATAAAACGAAAG AAGATGTACAAGGTATAGAACTTAGAAGTCAACGAAATTGGATTCCTAAAAATCCCATTTGGATTGAACGTACAATTGGT AACTGTTATGAGAACTCTAAGGTTGTTATTGAAAGTATTGAGAATGATTTACAATCAAAATTAAACAAACAAATGCGACC TGAATTGTATGGTCAGGCTGTCAATAAAATTATTCTAAAGTGTTCATTTAGTTATTACGACCATGTTTGCTGTAAATGCA ATTACGTTATCGCTGATGAAAAACTGAAATTGAGACAAAAAGAATTATACCCCAAATTACTAACAATGTTTACCAAACAA GAGATTGAAAAGAATGGATATTATCTTCGAAATCGCTTTGAGTTTGGACCATTCAGAACAGATACTGGAAAAGTAAAAGC AGTGATAACCCTTGAAAAAGAATTTAGTGAACTGAATCATTCTGAACAAAAAAAAAGATTAAGCGAATATATCCTATCAG CATTAAGTCATATAACAAACAAACTAAATAAGAAGGTTAAGTATGACTTTGATTTAATGTTGGCTGATTTTAATGTAATA TTGACCGAATGGAGTAATGAACAACTACCACTAACGAGCAAATGA
Upstream 100 bases:
>100_bases ATGAATTATTAAATAGAAATGAATTAGATTGCTAACAAACTGATAAAGCACCTTAATAGTCAATTATCTGCCGGACATTA GCGGTTAAAATAAAAAACAA
Downstream 100 bases:
>100_bases GTTGTCTTAACGGTCGGTTAGCCACCGGACATTAGTTGCAATAAAAAATGAAGAAAAATGAAAGGATATAGAATAGCAAT GAAGCTGATTAATCAAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNRIFEIEELNELEVFLKSQNDIDKLRDSLFAEFLKYADYKNVEEWNNAVRVCESLAIIGWGSNEALEALRGSFFNGNPM TCFVNKHREPRFVEAIWSRRINGFTMEAGRTSYHFSPDDPFQRQSIAWEYKTKEDVQGIELRSQRNWIPKNPIWIERTIG NCYENSKVVIESIENDLQSKLNKQMRPELYGQAVNKIILKCSFSYYDHVCCKCNYVIADEKLKLRQKELYPKLLTMFTKQ EIEKNGYYLRNRFEFGPFRTDTGKVKAVITLEKEFSELNHSEQKKRLSEYILSALSHITNKLNKKVKYDFDLMLADFNVI LTEWSNEQLPLTSK
Sequences:
>Translated_334_residues MNRIFEIEELNELEVFLKSQNDIDKLRDSLFAEFLKYADYKNVEEWNNAVRVCESLAIIGWGSNEALEALRGSFFNGNPM TCFVNKHREPRFVEAIWSRRINGFTMEAGRTSYHFSPDDPFQRQSIAWEYKTKEDVQGIELRSQRNWIPKNPIWIERTIG NCYENSKVVIESIENDLQSKLNKQMRPELYGQAVNKIILKCSFSYYDHVCCKCNYVIADEKLKLRQKELYPKLLTMFTKQ EIEKNGYYLRNRFEFGPFRTDTGKVKAVITLEKEFSELNHSEQKKRLSEYILSALSHITNKLNKKVKYDFDLMLADFNVI LTEWSNEQLPLTSK >Mature_334_residues MNRIFEIEELNELEVFLKSQNDIDKLRDSLFAEFLKYADYKNVEEWNNAVRVCESLAIIGWGSNEALEALRGSFFNGNPM TCFVNKHREPRFVEAIWSRRINGFTMEAGRTSYHFSPDDPFQRQSIAWEYKTKEDVQGIELRSQRNWIPKNPIWIERTIG NCYENSKVVIESIENDLQSKLNKQMRPELYGQAVNKIILKCSFSYYDHVCCKCNYVIADEKLKLRQKELYPKLLTMFTKQ EIEKNGYYLRNRFEFGPFRTDTGKVKAVITLEKEFSELNHSEQKKRLSEYILSALSHITNKLNKKVKYDFDLMLADFNVI LTEWSNEQLPLTSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39493; Mature: 39493
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIFEIEELNELEVFLKSQNDIDKLRDSLFAEFLKYADYKNVEEWNNAVRVCESLAIIG CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEE WGSNEALEALRGSFFNGNPMTCFVNKHREPRFVEAIWSRRINGFTMEAGRTSYHFSPDDP CCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCEECCCCCCC FQRQSIAWEYKTKEDVQGIELRSQRNWIPKNPIWIERTIGNCYENSKVVIESIENDLQSK CCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHH LNKQMRPELYGQAVNKIILKCSFSYYDHVCCKCNYVIADEKLKLRQKELYPKLLTMFTKQ HHHHHCHHHHHHHHHHHHHHCCCHHHHCHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHH EIEKNGYYLRNRFEFGPFRTDTGKVKAVITLEKEFSELNHSEQKKRLSEYILSALSHITN HHHCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KLNKKVKYDFDLMLADFNVILTEWSNEQLPLTSK HHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCC >Mature Secondary Structure MNRIFEIEELNELEVFLKSQNDIDKLRDSLFAEFLKYADYKNVEEWNNAVRVCESLAIIG CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEE WGSNEALEALRGSFFNGNPMTCFVNKHREPRFVEAIWSRRINGFTMEAGRTSYHFSPDDP CCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCEECCCCCCC FQRQSIAWEYKTKEDVQGIELRSQRNWIPKNPIWIERTIGNCYENSKVVIESIENDLQSK CCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHH LNKQMRPELYGQAVNKIILKCSFSYYDHVCCKCNYVIADEKLKLRQKELYPKLLTMFTKQ HHHHHCHHHHHHHHHHHHHHCCCHHHHCHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHH EIEKNGYYLRNRFEFGPFRTDTGKVKAVITLEKEFSELNHSEQKKRLSEYILSALSHITN HHHCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KLNKKVKYDFDLMLADFNVILTEWSNEQLPLTSK HHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA