Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345923

Identifier: 29345923

GI number: 29345923

Start: 635984

End: 636415

Strand: Reverse

Name: 29345923

Synonym: BT_0513

Alternate gene names: NA

Gene position: 636415-635984 (Counterclockwise)

Preceding gene: 29345924

Following gene: 29345922

Centisome position: 10.17

GC content: 31.02

Gene sequence:

>432_bases
ATGAAAGGATATAGAATAGCAATGAAGCTGATTAATCAAACCAAGATTTTTAAATTTATAGTTCCCATTATAGTATTCAT
TCTATTGTATGCTGTCTCAACAATTAGAAACAACAATGTAAGAAAGGATGGCATATATTCTATAGTAACTCTTATTAAAT
ACGGTTCTGCTTATAGAGGACAAAGCGCAAAATATGAATTTATATATAATAAGACTTTATATAAAGGAAGTTTTTTTATA
TCATTTAACGAGAGTAAAAACACTCCAATCGGAACCCGTTATTTTGTAACATTCTTAGCCAAAGCCCCCAACCGACATCG
AATATTAGACACCGTACCATCCTGGTTTACTCTAAAAGCGCCAGATAAAGGATGGAAAACATTACCTACACAAAAACAAC
TACGAATAATGATGAAAGATAGCTTGATTTAA

Upstream 100 bases:

>100_bases
GACCGAATGGAGTAATGAACAACTACCACTAACGAGCAAATGAGTTGTCTTAACGGTCGGTTAGCCACCGGACATTAGTT
GCAATAAAAAATGAAGAAAA

Downstream 100 bases:

>100_bases
ACGAAACATGGCAATCCGGATTCTGTAAAAGAATTGAATTAAATATGAAAGATAAAAGTTTGGAAAAAAACACATTCTGG
ATTTATTCTACAAATAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRGQSAKYEFIYNKTLYKGSFFI
SFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKAPDKGWKTLPTQKQLRIMMKDSLI

Sequences:

>Translated_143_residues
MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRGQSAKYEFIYNKTLYKGSFFI
SFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKAPDKGWKTLPTQKQLRIMMKDSLI
>Mature_143_residues
MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRGQSAKYEFIYNKTLYKGSFFI
SFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKAPDKGWKTLPTQKQLRIMMKDSLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16675; Mature: 16675

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
QSAKYEFIYNKTLYKGSFFISFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKA
CCCEEEEEECCEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCEEEEC
PDKGWKTLPTQKQLRIMMKDSLI
CCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
QSAKYEFIYNKTLYKGSFFISFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKA
CCCEEEEEECCEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCEEEEC
PDKGWKTLPTQKQLRIMMKDSLI
CCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA