| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345923
Identifier: 29345923
GI number: 29345923
Start: 635984
End: 636415
Strand: Reverse
Name: 29345923
Synonym: BT_0513
Alternate gene names: NA
Gene position: 636415-635984 (Counterclockwise)
Preceding gene: 29345924
Following gene: 29345922
Centisome position: 10.17
GC content: 31.02
Gene sequence:
>432_bases ATGAAAGGATATAGAATAGCAATGAAGCTGATTAATCAAACCAAGATTTTTAAATTTATAGTTCCCATTATAGTATTCAT TCTATTGTATGCTGTCTCAACAATTAGAAACAACAATGTAAGAAAGGATGGCATATATTCTATAGTAACTCTTATTAAAT ACGGTTCTGCTTATAGAGGACAAAGCGCAAAATATGAATTTATATATAATAAGACTTTATATAAAGGAAGTTTTTTTATA TCATTTAACGAGAGTAAAAACACTCCAATCGGAACCCGTTATTTTGTAACATTCTTAGCCAAAGCCCCCAACCGACATCG AATATTAGACACCGTACCATCCTGGTTTACTCTAAAAGCGCCAGATAAAGGATGGAAAACATTACCTACACAAAAACAAC TACGAATAATGATGAAAGATAGCTTGATTTAA
Upstream 100 bases:
>100_bases GACCGAATGGAGTAATGAACAACTACCACTAACGAGCAAATGAGTTGTCTTAACGGTCGGTTAGCCACCGGACATTAGTT GCAATAAAAAATGAAGAAAA
Downstream 100 bases:
>100_bases ACGAAACATGGCAATCCGGATTCTGTAAAAGAATTGAATTAAATATGAAAGATAAAAGTTTGGAAAAAAACACATTCTGG ATTTATTCTACAAATAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRGQSAKYEFIYNKTLYKGSFFI SFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKAPDKGWKTLPTQKQLRIMMKDSLI
Sequences:
>Translated_143_residues MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRGQSAKYEFIYNKTLYKGSFFI SFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKAPDKGWKTLPTQKQLRIMMKDSLI >Mature_143_residues MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRGQSAKYEFIYNKTLYKGSFFI SFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKAPDKGWKTLPTQKQLRIMMKDSLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16675; Mature: 16675
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC QSAKYEFIYNKTLYKGSFFISFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKA CCCEEEEEECCEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCEEEEC PDKGWKTLPTQKQLRIMMKDSLI CCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKGYRIAMKLINQTKIFKFIVPIIVFILLYAVSTIRNNNVRKDGIYSIVTLIKYGSAYRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC QSAKYEFIYNKTLYKGSFFISFNESKNTPIGTRYFVTFLAKAPNRHRILDTVPSWFTLKA CCCEEEEEECCEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCEEEEC PDKGWKTLPTQKQLRIMMKDSLI CCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA