| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345925
Identifier: 29345925
GI number: 29345925
Start: 638180
End: 639205
Strand: Reverse
Name: 29345925
Synonym: BT_0515
Alternate gene names: NA
Gene position: 639205-638180 (Counterclockwise)
Preceding gene: 29345926
Following gene: 29345924
Centisome position: 10.21
GC content: 42.5
Gene sequence:
>1026_bases ATGCTGACACAACAACAAGAACCATCCAAAGCCTACGTACTTGCGGGCATTTTCACTCTCTCCTTACGACTGATCGTAGG CTGGACTTATTTTTCAGCTTTTTGGCGCAGACTCGTTCTCGAAAACAAACTCATTCCGGATGCCACCGGATACATTGGAG AAAAGTTCAATCATTTCCTTCCCAATTCCATTGGTATCAAACCGATTATTGAATACTTGGTCAGCACACCGGATTTACTT TGGTGGGCAATGGTAATTTTCACATTAGTAGAAGGCATCGTCGGGTTACTCTATATGCTCGGTTTCTTCACACGATTAAT GAGTATCGGCGTATTCAGTCTGGCATTCGGCATTCTTTTAGGCTCCGGCTGGCTGGGCACTACCTGCCTCGACGAATGGC AAATCGGCATCTTGGGAGTGTCAGCCGGATTCACTATTTTCCTGTCCGGTGGTGGAAAATATTCTTTGGATTATCTGTTA TTACCAAAACTTTCCAAGAACAAATGGCTTGTATGGCTTACTTCCGGTGAACTTCCACTATCTATCAAGCAATTCAGTAA AGTCGCAATAAGCGGTGCAGTACTGCTTTTCATACTGACCTTATATACTAACCAAGTCTTCCATAACGGTATTTGGGGAC CTTTGCACAACAAATCGGTCAAACCGGAACTGAAAATATCCAATGCAAAGATTCAAGAGGATATCCTCACGTTCAAAGTA TACCGGATAGAAGGAGCCGACGTGTACGGTTCCTTCCTGATCGGCATAACACTAAAAGACGAGAATGGAAAAACAATACT TCAAAAGAATGGAGAAGAGCTAGCCCGCTTCCCACTTACCCGAATAAAAAATGACTATGTAGCCAAAGTAGCTCCGGGAA AACACAGCCTCATCATTCCTTTAGGAAGTAAAGCAACTCTTACAATCAGAAGTGATGTTTTTATGGACTTGCCCAAAAGT GACTACGAACTAATTCTGACAGATATAAGTGGTATAACCTGGAAAGAGAAAATTACCGTCAATTAA
Upstream 100 bases:
>100_bases AATCGTTTCAAAAAAAACAGGTTTTCATAAAAACATTTTCCACTGGAAACTTGTTCTAATAAGAAACGATTCTCTCAATA ACAAACTAACAACAAACAGT
Downstream 100 bases:
>100_bases ATCAAGTCAGAAAAATCTAATAACAAAAGACGGACTTTGTGGAAAGAAATATATATCGTACAAACTGTTTTTGCTATTTA TGGGGAGTAGATACTGACGC
Product: terminal quinol oxidase subunit
Products: NA
Alternate protein names: Terminal Quinol Oxidase Subunit; Quinol Oxidase Subunit; Terminal Quinol Oxidase Subunit DoxD; Terminal Quinol Oxidase Subunit I
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLTQQQEPSKAYVLAGIFTLSLRLIVGWTYFSAFWRRLVLENKLIPDATGYIGEKFNHFLPNSIGIKPIIEYLVSTPDLL WWAMVIFTLVEGIVGLLYMLGFFTRLMSIGVFSLAFGILLGSGWLGTTCLDEWQIGILGVSAGFTIFLSGGGKYSLDYLL LPKLSKNKWLVWLTSGELPLSIKQFSKVAISGAVLLFILTLYTNQVFHNGIWGPLHNKSVKPELKISNAKIQEDILTFKV YRIEGADVYGSFLIGITLKDENGKTILQKNGEELARFPLTRIKNDYVAKVAPGKHSLIIPLGSKATLTIRSDVFMDLPKS DYELILTDISGITWKEKITVN
Sequences:
>Translated_341_residues MLTQQQEPSKAYVLAGIFTLSLRLIVGWTYFSAFWRRLVLENKLIPDATGYIGEKFNHFLPNSIGIKPIIEYLVSTPDLL WWAMVIFTLVEGIVGLLYMLGFFTRLMSIGVFSLAFGILLGSGWLGTTCLDEWQIGILGVSAGFTIFLSGGGKYSLDYLL LPKLSKNKWLVWLTSGELPLSIKQFSKVAISGAVLLFILTLYTNQVFHNGIWGPLHNKSVKPELKISNAKIQEDILTFKV YRIEGADVYGSFLIGITLKDENGKTILQKNGEELARFPLTRIKNDYVAKVAPGKHSLIIPLGSKATLTIRSDVFMDLPKS DYELILTDISGITWKEKITVN >Mature_341_residues MLTQQQEPSKAYVLAGIFTLSLRLIVGWTYFSAFWRRLVLENKLIPDATGYIGEKFNHFLPNSIGIKPIIEYLVSTPDLL WWAMVIFTLVEGIVGLLYMLGFFTRLMSIGVFSLAFGILLGSGWLGTTCLDEWQIGILGVSAGFTIFLSGGGKYSLDYLL LPKLSKNKWLVWLTSGELPLSIKQFSKVAISGAVLLFILTLYTNQVFHNGIWGPLHNKSVKPELKISNAKIQEDILTFKV YRIEGADVYGSFLIGITLKDENGKTILQKNGEELARFPLTRIKNDYVAKVAPGKHSLIIPLGSKATLTIRSDVFMDLPKS DYELILTDISGITWKEKITVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38121; Mature: 38121
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQQQEPSKAYVLAGIFTLSLRLIVGWTYFSAFWRRLVLENKLIPDATGYIGEKFNHFL CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC PNSIGIKPIIEYLVSTPDLLWWAMVIFTLVEGIVGLLYMLGFFTRLMSIGVFSLAFGILL CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSGWLGTTCLDEWQIGILGVSAGFTIFLSGGGKYSLDYLLLPKLSKNKWLVWLTSGELPL CCCCCCCHHHCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCC SIKQFSKVAISGAVLLFILTLYTNQVFHNGIWGPLHNKSVKPELKISNAKIQEDILTFKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHEEEEEE YRIEGADVYGSFLIGITLKDENGKTILQKNGEELARFPLTRIKNDYVAKVAPGKHSLIIP EEEECCCEEEEEEEEEEEECCCCCCHHHCCCHHHHHCCHHHCCCCEEEEECCCCCEEEEE LGSKATLTIRSDVFMDLPKSDYELILTDISGITWKEKITVN ECCCEEEEEECCEEECCCCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure MLTQQQEPSKAYVLAGIFTLSLRLIVGWTYFSAFWRRLVLENKLIPDATGYIGEKFNHFL CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC PNSIGIKPIIEYLVSTPDLLWWAMVIFTLVEGIVGLLYMLGFFTRLMSIGVFSLAFGILL CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSGWLGTTCLDEWQIGILGVSAGFTIFLSGGGKYSLDYLLLPKLSKNKWLVWLTSGELPL CCCCCCCHHHCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCC SIKQFSKVAISGAVLLFILTLYTNQVFHNGIWGPLHNKSVKPELKISNAKIQEDILTFKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHEEEEEE YRIEGADVYGSFLIGITLKDENGKTILQKNGEELARFPLTRIKNDYVAKVAPGKHSLIIP EEEECCCEEEEEEEEEEEECCCCCCHHHCCCHHHHHCCHHHCCCCEEEEECCCCCEEEEE LGSKATLTIRSDVFMDLPKSDYELILTDISGITWKEKITVN ECCCEEEEEECCEEECCCCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA