| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345905
Identifier: 29345905
GI number: 29345905
Start: 611405
End: 613201
Strand: Reverse
Name: 29345905
Synonym: BT_0495
Alternate gene names: NA
Gene position: 613201-611405 (Counterclockwise)
Preceding gene: 29345906
Following gene: 29345904
Centisome position: 9.79
GC content: 46.58
Gene sequence:
>1797_bases ATGAAAAAGAAAAGTAAAATCATTTTAGGTGGATGCATCGTTGTAGCAGCCCTGATAGGTCTATCCGTATGGAATACCTG GTTCAGCGCTACCAAAATAGCTTTCGTCAACTTCCAGACCATACAGCAGGGAAGCATCTCGAAAGCCAACGACAATTCAT TCATCAAACTCAGCGAAGTGTCTCTTGACAACCTCGATCGTCTGACCAGTTATGACATGGTATTCATCAATGGCATGGGA CTGCGCATTGTCGAAGAACAACGTCAGCAAATACAGCAGGCAGCAGATAAGGGTATCCCCGTATACACCTCTATGGCTAC CAACCCTGCCAATAACATCTGCAACCTCGACAGTATACAGCAGAATCTCATACGCGGCTATCTGAGCAACGGCGGAAAGA CCAACTACCGCAATATGCTGAACTATATCCGTAAAGCCATTGACGGAAAGGCTTCTGCTGTACCCGAAGTGGAAGATCCG ATAGAAAGACCGAGCGATATGCTTTATCATGCCGGAATCAGTAATCCGGATGATGAACAGGAATTTCTTACCGTTGCCGA TTATGAGAAATTCATGCAAGAGAATAACCTTTATAAAGAAGGGGCACGAAAAATCATGATTACCGGACAAATGGCAGATG CCACCGATCTGATAAAAGCGCTGGAGAATGCGGGATATAATGTTTATCCCGTTCAATCCATGACAAGATTCATGTCATTC ATTGAGGAAGTGCAGCCCGATGCCGTCATCAATATGGCACACGGACGTATGGGAGATAAAATGGTTGATTATCTGAAAGC CAGAAATATCCTTTTGTTCGCTCCGCTCACAATCAACAGTCTTGTGGATGAATGGGAAAACGATCCGATGGGTATGTCGG GAGGCTTTATGTCACAGAGCATCGTAACACCGGAAATAGACGGAGCTATCCGCCCTTTCGCCCTTTTCGCACAATATGAA GATAAAGAAGGATTGCGCCATTCGTATGCCGTCCCCGAACGTCTGAAGACTTTTGTATCTACAATAGACAACTACCTGAA TCTGAAAACAAAACCTAATTTTGAGAAGAAAGTAGCTATCTATTATTACAAAGGTCCCGGTCAGAACGCATTGACCGCTG CCGGCATGGAAGTAGTACCTTCCCTTTACAATCTTCTGCTTCGTATGAAACAAGAGGGATATAATATATCCGGTCTGCCT GCCAACGCTCAGGAACTGGGAAAAATGATACAAGCCCAGGGGGCGGTATTCAACGCTTATGCAGAAGGAGCTTTCAACGA CTTCATGCAAAACGGACATCCCGAACTGATCACCAAAGAACAGTATGAAAGCTGGGTGAAAGAATCGCTTCGTCCCGAAA AGTATCAGGAGGTGGTAGATGCTTTCGGAGAATTTCCCGGCAACTATATGGTGACTCCTGACGGCAAATTAGGTATTGCC CGTTTACAGTTCGGTAACGTTGTGCTATTGCCACAAAACGCTGCCGGAAGCGGTGACAACTCCTTCCAGGTGGTGCACGG CACCGACATGGCTCCGCCACACACCTACATTGCCTCATACCTGTGGATGCAACATGGCTTCAAAGCCGATGCACTGATTC ACTTCGGTACACACGGCAGTCTCGAATTCACTCCGAGAAAACAAGTCGCATTATGCAGCAATGACTGGCCGGACCGTTTG GTAGGAGCCGTTCCCCACTACTACCTCTACTCTATCGGAAACGTCGGAGAAGGTATGATGGCCAAACGCCGTTCTTATGC TAGCCTTGCAATCATATCTCACTCCTCCTTTCCTTGA
Upstream 100 bases:
>100_bases GGGAACCAACCTGACATTAGGACTATCACTGGATATAGACAGGCTCTTCAAAAAATAAACGGCAACAATAGAACTACATA CAAAGCTAAAAATAAGAGAA
Downstream 100 bases:
>100_bases AAGCAGCGTACGCGGCATTTACCGGGAATTAATGGAAAAGATCAAAATCTATAATAACTCCCAGAAGGCAAACAAAGATC AGGAGTCGCTGGCTGTGAAA
Product: cobalamin biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MKKKSKIILGGCIVVAALIGLSVWNTWFSATKIAFVNFQTIQQGSISKANDNSFIKLSEVSLDNLDRLTSYDMVFINGMG LRIVEEQRQQIQQAADKGIPVYTSMATNPANNICNLDSIQQNLIRGYLSNGGKTNYRNMLNYIRKAIDGKASAVPEVEDP IERPSDMLYHAGISNPDDEQEFLTVADYEKFMQENNLYKEGARKIMITGQMADATDLIKALENAGYNVYPVQSMTRFMSF IEEVQPDAVINMAHGRMGDKMVDYLKARNILLFAPLTINSLVDEWENDPMGMSGGFMSQSIVTPEIDGAIRPFALFAQYE DKEGLRHSYAVPERLKTFVSTIDNYLNLKTKPNFEKKVAIYYYKGPGQNALTAAGMEVVPSLYNLLLRMKQEGYNISGLP ANAQELGKMIQAQGAVFNAYAEGAFNDFMQNGHPELITKEQYESWVKESLRPEKYQEVVDAFGEFPGNYMVTPDGKLGIA RLQFGNVVLLPQNAAGSGDNSFQVVHGTDMAPPHTYIASYLWMQHGFKADALIHFGTHGSLEFTPRKQVALCSNDWPDRL VGAVPHYYLYSIGNVGEGMMAKRRSYASLAIISHSSFP
Sequences:
>Translated_598_residues MKKKSKIILGGCIVVAALIGLSVWNTWFSATKIAFVNFQTIQQGSISKANDNSFIKLSEVSLDNLDRLTSYDMVFINGMG LRIVEEQRQQIQQAADKGIPVYTSMATNPANNICNLDSIQQNLIRGYLSNGGKTNYRNMLNYIRKAIDGKASAVPEVEDP IERPSDMLYHAGISNPDDEQEFLTVADYEKFMQENNLYKEGARKIMITGQMADATDLIKALENAGYNVYPVQSMTRFMSF IEEVQPDAVINMAHGRMGDKMVDYLKARNILLFAPLTINSLVDEWENDPMGMSGGFMSQSIVTPEIDGAIRPFALFAQYE DKEGLRHSYAVPERLKTFVSTIDNYLNLKTKPNFEKKVAIYYYKGPGQNALTAAGMEVVPSLYNLLLRMKQEGYNISGLP ANAQELGKMIQAQGAVFNAYAEGAFNDFMQNGHPELITKEQYESWVKESLRPEKYQEVVDAFGEFPGNYMVTPDGKLGIA RLQFGNVVLLPQNAAGSGDNSFQVVHGTDMAPPHTYIASYLWMQHGFKADALIHFGTHGSLEFTPRKQVALCSNDWPDRL VGAVPHYYLYSIGNVGEGMMAKRRSYASLAIISHSSFP >Mature_598_residues MKKKSKIILGGCIVVAALIGLSVWNTWFSATKIAFVNFQTIQQGSISKANDNSFIKLSEVSLDNLDRLTSYDMVFINGMG LRIVEEQRQQIQQAADKGIPVYTSMATNPANNICNLDSIQQNLIRGYLSNGGKTNYRNMLNYIRKAIDGKASAVPEVEDP IERPSDMLYHAGISNPDDEQEFLTVADYEKFMQENNLYKEGARKIMITGQMADATDLIKALENAGYNVYPVQSMTRFMSF IEEVQPDAVINMAHGRMGDKMVDYLKARNILLFAPLTINSLVDEWENDPMGMSGGFMSQSIVTPEIDGAIRPFALFAQYE DKEGLRHSYAVPERLKTFVSTIDNYLNLKTKPNFEKKVAIYYYKGPGQNALTAAGMEVVPSLYNLLLRMKQEGYNISGLP ANAQELGKMIQAQGAVFNAYAEGAFNDFMQNGHPELITKEQYESWVKESLRPEKYQEVVDAFGEFPGNYMVTPDGKLGIA RLQFGNVVLLPQNAAGSGDNSFQVVHGTDMAPPHTYIASYLWMQHGFKADALIHFGTHGSLEFTPRKQVALCSNDWPDRL VGAVPHYYLYSIGNVGEGMMAKRRSYASLAIISHSSFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunit H family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003672 - InterPro: IPR011991 [H]
Pfam domain/function: PF02514 CobN-Mg_chel [H]
EC number: NA
Molecular weight: Translated: 66701; Mature: 66701
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSKIILGGCIVVAALIGLSVWNTWFSATKIAFVNFQTIQQGSISKANDNSFIKLSEV CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHCCCCCCCCCCCCEEEEECC SLDNLDRLTSYDMVFINGMGLRIVEEQRQQIQQAADKGIPVYTSMATNPANNICNLDSIQ CHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHH QNLIRGYLSNGGKTNYRNMLNYIRKAIDGKASAVPEVEDPIERPSDMLYHAGISNPDDEQ HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHEEECCCCCCCCHH EFLTVADYEKFMQENNLYKEGARKIMITGQMADATDLIKALENAGYNVYPVQSMTRFMSF HHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHH IEEVQPDAVINMAHGRMGDKMVDYLKARNILLFAPLTINSLVDEWENDPMGMSGGFMSQS HHHHCCCCEEEECCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCC IVTPEIDGAIRPFALFAQYEDKEGLRHSYAVPERLKTFVSTIDNYLNLKTKPNFEKKVAI CCCCCCCCCCCCHHHEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE YYYKGPGQNALTAAGMEVVPSLYNLLLRMKQEGYNISGLPANAQELGKMIQAQGAVFNAY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEHH AEGAFNDFMQNGHPELITKEQYESWVKESLRPEKYQEVVDAFGEFPGNYMVTPDGKLGIA HHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCEEEE RLQFGNVVLLPQNAAGSGDNSFQVVHGTDMAPPHTYIASYLWMQHGFKADALIHFGTHGS EEEECCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC LEFTPRKQVALCSNDWPDRLVGAVPHYYLYSIGNVGEGMMAKRRSYASLAIISHSSFP EEECCCCCEEECCCCCHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCC >Mature Secondary Structure MKKKSKIILGGCIVVAALIGLSVWNTWFSATKIAFVNFQTIQQGSISKANDNSFIKLSEV CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHCCCCCCCCCCCCEEEEECC SLDNLDRLTSYDMVFINGMGLRIVEEQRQQIQQAADKGIPVYTSMATNPANNICNLDSIQ CHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHH QNLIRGYLSNGGKTNYRNMLNYIRKAIDGKASAVPEVEDPIERPSDMLYHAGISNPDDEQ HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHEEECCCCCCCCHH EFLTVADYEKFMQENNLYKEGARKIMITGQMADATDLIKALENAGYNVYPVQSMTRFMSF HHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHH IEEVQPDAVINMAHGRMGDKMVDYLKARNILLFAPLTINSLVDEWENDPMGMSGGFMSQS HHHHCCCCEEEECCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCC IVTPEIDGAIRPFALFAQYEDKEGLRHSYAVPERLKTFVSTIDNYLNLKTKPNFEKKVAI CCCCCCCCCCCCHHHEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE YYYKGPGQNALTAAGMEVVPSLYNLLLRMKQEGYNISGLPANAQELGKMIQAQGAVFNAY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEHH AEGAFNDFMQNGHPELITKEQYESWVKESLRPEKYQEVVDAFGEFPGNYMVTPDGKLGIA HHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCEEEE RLQFGNVVLLPQNAAGSGDNSFQVVHGTDMAPPHTYIASYLWMQHGFKADALIHFGTHGS EEEECCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC LEFTPRKQVALCSNDWPDRLVGAVPHYYLYSIGNVGEGMMAKRRSYASLAIISHSSFP EEECCCCCEEECCCCCHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]