Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345904

Identifier: 29345904

GI number: 29345904

Start: 608809

End: 611373

Strand: Reverse

Name: 29345904

Synonym: BT_0494

Alternate gene names: NA

Gene position: 611373-608809 (Counterclockwise)

Preceding gene: 29345905

Following gene: 29345903

Centisome position: 9.77

GC content: 47.56

Gene sequence:

>2565_bases
ATGGAAAAGATCAAAATCTATAATAACTCCCAGAAGGCAAACAAAGATCAGGAGTCGCTGGCTGTGAAAACCTTGACTGT
GAAGATGGGAATCCATCGTGATTTAGGACTGGACAGTATGGCTAATAAACCGTATACGGAAGATGAAATCGCCCGTGTAG
AAAACTTTGCCGAAGAACTGGCTACAGAGAAAATCACGGGGCAGCTTTACACAATGGGAGTTCCTTACGAACCGGAAAGA
ATAACTTCTTCTGTCTACGCGATGGCAACAGAACCGATTGCCTATAGTCTTTTTGCTCTTGACAAGCAACGCGGCAAAGC
TACAGAATCTGCCGAAAAACACCGAAGTGTCTTTACCCAGCAATATCTCATGCCTGCCCGCCTTCTCGTAGAGAGACTGA
TGGCTAACCCTTCACTGGCAACCGACGAACTGATTTGCCACACAGCCGGAATCACTCCGCAAGAGTTGGCAAAAGCGAGA
CAGATAGAAGCCGAGCGCAATGCCCCCAAAGGCATGATGGCAATGATGATGGCTGCCGCAGCCAAAAAGGATCAGGCTGA
TAATGAGCCGTCGGGCAATGGTCATCCGGCTTCGGCAAAAATGGAAAAAGGACCTCATGGTAAAATGCCTGCAGGCATGA
AAGAAGCCATGAAGAAAATGGGTGCTAACATGGACCCGGAAAAAGCGATGGAAATGGCCAAATCAATGGGTGCCAGTCCG
GAAGCTTTAAAGAAAATGGAAGCCAGCATGAAGGCTAATAAGGATACATCCACAGACGCTTCGGGCAAACCGGCAATGGC
AGGAAAGACTGAAAAGCCGCAGGGTATGTCAGCAATGATGGCAGCTATGGGAAAGGCTCCGAAAGAATACAGCAAAGAAG
AGGTGGAATTTGCGCTTGCAGTAGCTGAAGTAGAACGTACCATCAAGAATGTAGGCAATTATAAAAATGCACTTCTGACA
AGTCCGGAAGAGGAACTGAGCAGTCTGATGAATGCCTTGAAAGGCGGATACACAGCTCCCACACCCGGTGGTGACCCGAT
CGCTAATCCGAACACGCTACCTACCGGACGTAATATGTATGCCATTAATGCCGAAGCGACTCCGACAGAGTCTGCCTGGG
AAAAAGGTATTGCTTTGGCCAAGCAGACAATTGATAGGTACAAGCAACGTCACAACGACTCCATACCACGCAAGGTCAGT
TATACACTATGGTCATCCGAGTTTATTGAAACCGGAGGGGCAACCATCGCACAGGTACTTTATATGTTAGGTGTTGAGCC
TGTCCGTGATGCTTTCGGTCGTGTCAGCGATTTAAAACTGATTCCTTCAACCGAATTAGGACGTCCGCGCATCGACGTGG
TAGTCCAGACTTCCGGACAACTTCGTGATCTTGCCGCCTCCCGTCTCTTCCTCATCAACCGTGCAGTAGAAATGGCTGCC
GCCGCCAAAGACGACAAATATGAAAATCAGGTTGCCTCCAGCGTAATAGAAGCCGAACGGGTGCTGACCGAAAAAGGATT
AAGCCCGAAAGATGCCCGCGAAATTTCAACATTCCGGGTATTCGGAGGAGCCAACGGTATGTATGGAACCGGTATTCAGG
AAATGGTAGAATCCGGCGACCGCTGGGAGAATGAATCGGAAATCGCCGATACTTATCTCAATAATATGGGCGCGTATTAC
GGCAGCGAAAAGAATTGGGAAGTATTCCAAAAGTTCGCTTTCGAGGCTGCACTGACCCGGACGGATGTTGTCGTACAACC
ACGGCAAAGTAATACCTGGGGAGCTTTAAGCCTTGACCATGTATACGAATTTATGGGAGGTATGAATCTCGCCGTACGCA
ATGTGACCGGCAAAGATCCGGATGCCTACCTCAGTGATTATCGCAACCGGAACCATATGAAGATGCAGGAACTGAAAGAG
GCTGTCGGCGTAGAAAGTCGCACCACTATCCTGAACCCAACTTACATCAAAGAGAAAATGAAAGGCGGGGCTTCTTCGGC
AAGTGAATTTGCAGAAGTGATCACCAATACCTATGGATGGAATGTGATGAAACCGGCTGCAATCGACAAAGAGCTTTGGG
ATAATATATATAATGTATATGTGAAGGATGAACTGAACTTGGGAGTCAAACAATATTTCGAACAACAGAATCCTGCCGCT
TTGGAAGAGATGACTGCCGTCATGCTCGAAAGCGCCCGTAAGGGATTGTGGCAAGCAAGTGAAGAACAGGTAGCGGAACT
TAGCAAACTTCATACGGAGATTGTCAATACTTACCGCCCGTCTTGTTCCGGATTTGTTTGTGACAATGCCAAGCTCCGTG
ACTTCATTGCATCGAAAGCAGACGCACAAACCGCTACACAGTACAAAGAAAATATCTCTAAAATCCGTGAAGCAAAAGCA
AGCGGCAGCAACAAGGGAGTGGTGATGAAAAAAGAAGAGATGAATCAGACAGCCGAAAATCAGACAAATACATTAAGCAA
TGTAGCCGTAGGCATCGCTGTCATTATCGTTATTCTTGCTCTGATACTCTTTGTACGCAAGCGCCGCAAAAGCAGTCAGA
TGTAA

Upstream 100 bases:

>100_bases
GAAGGTATGATGGCCAAACGCCGTTCTTATGCTAGCCTTGCAATCATATCTCACTCCTCCTTTCCTTGAAAGCAGCGTAC
GCGGCATTTACCGGGAATTA

Downstream 100 bases:

>100_bases
CCCACGTCCTGTGAATTATCAATCGTAACTTGTAAATTGTAAAATCATATAATGGATACAGTTGTTCTTGTACTTATGCT
TCTTACAGCATTTAACTTTC

Product: protoporphyrin IX magnesium chelatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 854; Mature: 854

Protein sequence:

>854_residues
MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEELATEKITGQLYTMGVPYEPER
ITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQQYLMPARLLVERLMANPSLATDELICHTAGITPQELAKAR
QIEAERNAPKGMMAMMMAAAAKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP
EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALAVAEVERTIKNVGNYKNALLT
SPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMYAINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVS
YTLWSSEFIETGGATIAQVLYMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA
AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGDRWENESEIADTYLNNMGAYY
GSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDHVYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKE
AVGVESRTTILNPTYIKEKMKGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA
LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKADAQTATQYKENISKIREAKA
SGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILALILFVRKRRKSSQM

Sequences:

>Translated_854_residues
MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEELATEKITGQLYTMGVPYEPER
ITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQQYLMPARLLVERLMANPSLATDELICHTAGITPQELAKAR
QIEAERNAPKGMMAMMMAAAAKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP
EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALAVAEVERTIKNVGNYKNALLT
SPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMYAINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVS
YTLWSSEFIETGGATIAQVLYMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA
AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGDRWENESEIADTYLNNMGAYY
GSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDHVYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKE
AVGVESRTTILNPTYIKEKMKGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA
LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKADAQTATQYKENISKIREAKA
SGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILALILFVRKRRKSSQM
>Mature_854_residues
MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEELATEKITGQLYTMGVPYEPER
ITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQQYLMPARLLVERLMANPSLATDELICHTAGITPQELAKAR
QIEAERNAPKGMMAMMMAAAAKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP
EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALAVAEVERTIKNVGNYKNALLT
SPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMYAINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVS
YTLWSSEFIETGGATIAQVLYMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA
AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGDRWENESEIADTYLNNMGAYY
GSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDHVYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKE
AVGVESRTTILNPTYIKEKMKGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA
LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKADAQTATQYKENISKIREAKA
SGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILALILFVRKRRKSSQM

Specific function: Unknown

COG id: COG1429

COG function: function code H; Cobalamin biosynthesis protein CobN and related Mg-chelatases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunit H family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003672
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02514 CobN-Mg_chel [H]

EC number: NA

Molecular weight: Translated: 94149; Mature: 94149

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEEL
CCCEEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
ATEKITGQLYTMGVPYEPERITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQ
HHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QYLMPARLLVERLMANPSLATDELICHTAGITPQELAKARQIEAERNAPKGMMAMMMAAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCH
EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
VAEVERTIKNVGNYKNALLTSPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMY
HHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
AINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVSYTLWSSEFIETGGATIAQVL
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCHHHHHHH
YMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA
HHHCCCHHHHHHCCHHCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGD
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCCCHHHHHHCCC
RWENESEIADTYLNNMGAYYGSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDH
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHH
VYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKEAVGVESRTTILNPTYIKEKM
HHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHHH
KGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHH
LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHH
DAQTATQYKENISKIREAKASGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILA
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILFVRKRRKSSQM
HHHHHHHHHHHCCC
>Mature Secondary Structure
MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEEL
CCCEEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
ATEKITGQLYTMGVPYEPERITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQ
HHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QYLMPARLLVERLMANPSLATDELICHTAGITPQELAKARQIEAERNAPKGMMAMMMAAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCH
EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
VAEVERTIKNVGNYKNALLTSPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMY
HHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
AINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVSYTLWSSEFIETGGATIAQVL
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCHHHHHHH
YMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA
HHHCCCHHHHHHCCHHCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGD
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCCCHHHHHHCCC
RWENESEIADTYLNNMGAYYGSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDH
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHH
VYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKEAVGVESRTTILNPTYIKEKM
HHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHHH
KGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHH
LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHH
DAQTATQYKENISKIREAKASGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILA
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILFVRKRRKSSQM
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]