| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345904
Identifier: 29345904
GI number: 29345904
Start: 608809
End: 611373
Strand: Reverse
Name: 29345904
Synonym: BT_0494
Alternate gene names: NA
Gene position: 611373-608809 (Counterclockwise)
Preceding gene: 29345905
Following gene: 29345903
Centisome position: 9.77
GC content: 47.56
Gene sequence:
>2565_bases ATGGAAAAGATCAAAATCTATAATAACTCCCAGAAGGCAAACAAAGATCAGGAGTCGCTGGCTGTGAAAACCTTGACTGT GAAGATGGGAATCCATCGTGATTTAGGACTGGACAGTATGGCTAATAAACCGTATACGGAAGATGAAATCGCCCGTGTAG AAAACTTTGCCGAAGAACTGGCTACAGAGAAAATCACGGGGCAGCTTTACACAATGGGAGTTCCTTACGAACCGGAAAGA ATAACTTCTTCTGTCTACGCGATGGCAACAGAACCGATTGCCTATAGTCTTTTTGCTCTTGACAAGCAACGCGGCAAAGC TACAGAATCTGCCGAAAAACACCGAAGTGTCTTTACCCAGCAATATCTCATGCCTGCCCGCCTTCTCGTAGAGAGACTGA TGGCTAACCCTTCACTGGCAACCGACGAACTGATTTGCCACACAGCCGGAATCACTCCGCAAGAGTTGGCAAAAGCGAGA CAGATAGAAGCCGAGCGCAATGCCCCCAAAGGCATGATGGCAATGATGATGGCTGCCGCAGCCAAAAAGGATCAGGCTGA TAATGAGCCGTCGGGCAATGGTCATCCGGCTTCGGCAAAAATGGAAAAAGGACCTCATGGTAAAATGCCTGCAGGCATGA AAGAAGCCATGAAGAAAATGGGTGCTAACATGGACCCGGAAAAAGCGATGGAAATGGCCAAATCAATGGGTGCCAGTCCG GAAGCTTTAAAGAAAATGGAAGCCAGCATGAAGGCTAATAAGGATACATCCACAGACGCTTCGGGCAAACCGGCAATGGC AGGAAAGACTGAAAAGCCGCAGGGTATGTCAGCAATGATGGCAGCTATGGGAAAGGCTCCGAAAGAATACAGCAAAGAAG AGGTGGAATTTGCGCTTGCAGTAGCTGAAGTAGAACGTACCATCAAGAATGTAGGCAATTATAAAAATGCACTTCTGACA AGTCCGGAAGAGGAACTGAGCAGTCTGATGAATGCCTTGAAAGGCGGATACACAGCTCCCACACCCGGTGGTGACCCGAT CGCTAATCCGAACACGCTACCTACCGGACGTAATATGTATGCCATTAATGCCGAAGCGACTCCGACAGAGTCTGCCTGGG AAAAAGGTATTGCTTTGGCCAAGCAGACAATTGATAGGTACAAGCAACGTCACAACGACTCCATACCACGCAAGGTCAGT TATACACTATGGTCATCCGAGTTTATTGAAACCGGAGGGGCAACCATCGCACAGGTACTTTATATGTTAGGTGTTGAGCC TGTCCGTGATGCTTTCGGTCGTGTCAGCGATTTAAAACTGATTCCTTCAACCGAATTAGGACGTCCGCGCATCGACGTGG TAGTCCAGACTTCCGGACAACTTCGTGATCTTGCCGCCTCCCGTCTCTTCCTCATCAACCGTGCAGTAGAAATGGCTGCC GCCGCCAAAGACGACAAATATGAAAATCAGGTTGCCTCCAGCGTAATAGAAGCCGAACGGGTGCTGACCGAAAAAGGATT AAGCCCGAAAGATGCCCGCGAAATTTCAACATTCCGGGTATTCGGAGGAGCCAACGGTATGTATGGAACCGGTATTCAGG AAATGGTAGAATCCGGCGACCGCTGGGAGAATGAATCGGAAATCGCCGATACTTATCTCAATAATATGGGCGCGTATTAC GGCAGCGAAAAGAATTGGGAAGTATTCCAAAAGTTCGCTTTCGAGGCTGCACTGACCCGGACGGATGTTGTCGTACAACC ACGGCAAAGTAATACCTGGGGAGCTTTAAGCCTTGACCATGTATACGAATTTATGGGAGGTATGAATCTCGCCGTACGCA ATGTGACCGGCAAAGATCCGGATGCCTACCTCAGTGATTATCGCAACCGGAACCATATGAAGATGCAGGAACTGAAAGAG GCTGTCGGCGTAGAAAGTCGCACCACTATCCTGAACCCAACTTACATCAAAGAGAAAATGAAAGGCGGGGCTTCTTCGGC AAGTGAATTTGCAGAAGTGATCACCAATACCTATGGATGGAATGTGATGAAACCGGCTGCAATCGACAAAGAGCTTTGGG ATAATATATATAATGTATATGTGAAGGATGAACTGAACTTGGGAGTCAAACAATATTTCGAACAACAGAATCCTGCCGCT TTGGAAGAGATGACTGCCGTCATGCTCGAAAGCGCCCGTAAGGGATTGTGGCAAGCAAGTGAAGAACAGGTAGCGGAACT TAGCAAACTTCATACGGAGATTGTCAATACTTACCGCCCGTCTTGTTCCGGATTTGTTTGTGACAATGCCAAGCTCCGTG ACTTCATTGCATCGAAAGCAGACGCACAAACCGCTACACAGTACAAAGAAAATATCTCTAAAATCCGTGAAGCAAAAGCA AGCGGCAGCAACAAGGGAGTGGTGATGAAAAAAGAAGAGATGAATCAGACAGCCGAAAATCAGACAAATACATTAAGCAA TGTAGCCGTAGGCATCGCTGTCATTATCGTTATTCTTGCTCTGATACTCTTTGTACGCAAGCGCCGCAAAAGCAGTCAGA TGTAA
Upstream 100 bases:
>100_bases GAAGGTATGATGGCCAAACGCCGTTCTTATGCTAGCCTTGCAATCATATCTCACTCCTCCTTTCCTTGAAAGCAGCGTAC GCGGCATTTACCGGGAATTA
Downstream 100 bases:
>100_bases CCCACGTCCTGTGAATTATCAATCGTAACTTGTAAATTGTAAAATCATATAATGGATACAGTTGTTCTTGTACTTATGCT TCTTACAGCATTTAACTTTC
Product: protoporphyrin IX magnesium chelatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEELATEKITGQLYTMGVPYEPER ITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQQYLMPARLLVERLMANPSLATDELICHTAGITPQELAKAR QIEAERNAPKGMMAMMMAAAAKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALAVAEVERTIKNVGNYKNALLT SPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMYAINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVS YTLWSSEFIETGGATIAQVLYMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGDRWENESEIADTYLNNMGAYY GSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDHVYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKE AVGVESRTTILNPTYIKEKMKGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKADAQTATQYKENISKIREAKA SGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILALILFVRKRRKSSQM
Sequences:
>Translated_854_residues MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEELATEKITGQLYTMGVPYEPER ITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQQYLMPARLLVERLMANPSLATDELICHTAGITPQELAKAR QIEAERNAPKGMMAMMMAAAAKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALAVAEVERTIKNVGNYKNALLT SPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMYAINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVS YTLWSSEFIETGGATIAQVLYMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGDRWENESEIADTYLNNMGAYY GSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDHVYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKE AVGVESRTTILNPTYIKEKMKGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKADAQTATQYKENISKIREAKA SGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILALILFVRKRRKSSQM >Mature_854_residues MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEELATEKITGQLYTMGVPYEPER ITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQQYLMPARLLVERLMANPSLATDELICHTAGITPQELAKAR QIEAERNAPKGMMAMMMAAAAKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALAVAEVERTIKNVGNYKNALLT SPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMYAINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVS YTLWSSEFIETGGATIAQVLYMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGDRWENESEIADTYLNNMGAYY GSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDHVYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKE AVGVESRTTILNPTYIKEKMKGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKADAQTATQYKENISKIREAKA SGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILALILFVRKRRKSSQM
Specific function: Unknown
COG id: COG1429
COG function: function code H; Cobalamin biosynthesis protein CobN and related Mg-chelatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunit H family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003672 - InterPro: IPR011991 [H]
Pfam domain/function: PF02514 CobN-Mg_chel [H]
EC number: NA
Molecular weight: Translated: 94149; Mature: 94149
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEEL CCCEEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH ATEKITGQLYTMGVPYEPERITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQ HHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH QYLMPARLLVERLMANPSLATDELICHTAGITPQELAKARQIEAERNAPKGMMAMMMAAA HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH AKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCH EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH VAEVERTIKNVGNYKNALLTSPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMY HHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE AINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVSYTLWSSEFIETGGATIAQVL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCHHHHHHH YMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA HHHCCCHHHHHHCCHHCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGD HHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCCCHHHHHHCCC RWENESEIADTYLNNMGAYYGSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDH CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHH VYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKEAVGVESRTTILNPTYIKEKM HHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHHH KGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHH LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHH DAQTATQYKENISKIREAKASGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILA HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILFVRKRRKSSQM HHHHHHHHHHHCCC >Mature Secondary Structure MEKIKIYNNSQKANKDQESLAVKTLTVKMGIHRDLGLDSMANKPYTEDEIARVENFAEEL CCCEEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH ATEKITGQLYTMGVPYEPERITSSVYAMATEPIAYSLFALDKQRGKATESAEKHRSVFTQ HHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH QYLMPARLLVERLMANPSLATDELICHTAGITPQELAKARQIEAERNAPKGMMAMMMAAA HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH AKKDQADNEPSGNGHPASAKMEKGPHGKMPAGMKEAMKKMGANMDPEKAMEMAKSMGASP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCH EALKKMEASMKANKDTSTDASGKPAMAGKTEKPQGMSAMMAAMGKAPKEYSKEEVEFALA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH VAEVERTIKNVGNYKNALLTSPEEELSSLMNALKGGYTAPTPGGDPIANPNTLPTGRNMY HHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE AINAEATPTESAWEKGIALAKQTIDRYKQRHNDSIPRKVSYTLWSSEFIETGGATIAQVL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCHHHHHHH YMLGVEPVRDAFGRVSDLKLIPSTELGRPRIDVVVQTSGQLRDLAASRLFLINRAVEMAA HHHCCCHHHHHHCCHHCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH AAKDDKYENQVASSVIEAERVLTEKGLSPKDAREISTFRVFGGANGMYGTGIQEMVESGD HHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCCCHHHHHHCCC RWENESEIADTYLNNMGAYYGSEKNWEVFQKFAFEAALTRTDVVVQPRQSNTWGALSLDH CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHH VYEFMGGMNLAVRNVTGKDPDAYLSDYRNRNHMKMQELKEAVGVESRTTILNPTYIKEKM HHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHHH KGGASSASEFAEVITNTYGWNVMKPAAIDKELWDNIYNVYVKDELNLGVKQYFEQQNPAA CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCHH LEEMTAVMLESARKGLWQASEEQVAELSKLHTEIVNTYRPSCSGFVCDNAKLRDFIASKA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHH DAQTATQYKENISKIREAKASGSNKGVVMKKEEMNQTAENQTNTLSNVAVGIAVIIVILA HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILFVRKRRKSSQM HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]