Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345860

Identifier: 29345860

GI number: 29345860

Start: 548886

End: 550583

Strand: Reverse

Name: 29345860

Synonym: BT_0450

Alternate gene names: NA

Gene position: 550583-548886 (Counterclockwise)

Preceding gene: 29345861

Following gene: 29345859

Centisome position: 8.79

GC content: 40.81

Gene sequence:

>1698_bases
ATGAAAAAGAATATACAATATTTACTATTAGGAGTATTGGCATTAATGAGTTCCTGCCAAGATCCGGAATATGTACTTCC
AACTGCTGAGCGGCAGGGAATCACAAGCTTGACCGCACTTTTTACATCAGGTCCTTATGTGGACAAAGAAGCTGTTGTCT
ACACAATTGCGGATGCGTCTGTAGATAAATATGTGATTCCTATACCATGGTTTTATCCGGAAGACAGTGAAAATGAAACG
GCGGAATATATGAAGACAATGAGGGTCCAGGCAAAGTTAGCTCCTAACTGTACTATTAACCCTGTTTTGACGATATTGGA
TTTGACTAAAGAAAATTACTTCACTTATACAGATGCGCAGGGATATAAGAAACAAATCTGCATTACGGGTGAAAGAGTGA
AATCCAATAAATGTCAGTTATTAAGTTTCTCAATACCGGCCGAAGATATTAGTGGAATTATTGACGAAGAGCATAAGACG
GTATCTCTGATTTCTGCAGAAGATTTATCTTCCTGTCTGGCAGAATATTCACTTTCCTCTCATGCGACAATGTCGCCGGA
TCCTAAGACAGAGGCGCTTGACTTCAATTCACCTGTAGAACTGACGGTCATCGCTCACGATGGAGTGACGAAGCAGACGT
ACACAGTTCAGAAGGCAGTGCCGGATAAGATCCCTTATGGATATAGAAAAGGCAGTGAGACAGAATTGTTTAAATTGGAT
ATGGGAGTTATAGGTTTGCCCTGGACTTCAGCCAACTCACCTTCACTGGCCGTTAATGGCAATAATTTAGTTGTTTGCTT
AGGGGACGGTTCTACTGCTCCTACCTATTATAATGCTTCTACAGGAAGTAAGATTGGCAATATGACTTTGGGAAGCGTAG
GTGTTGCATCTTTAGGTTGTGTGACAAGTGATAGTAAAGGAAACATATTGTTGGCAACAAAAGCAGCTAATGGTAAATCC
TTCTCTATCTATAAGACTTCTTCTGTAACCACAGTTCCAACTTTATTGATATCTTATACCAACAATACAAGTTTGGATAT
GGGTACCAAAGTATCTGTACAGGGTGATATCAATACAAATGCCGCTATCATTGCTACATGTGACGGGACAGCCTCGTCCG
GTTCTAATACGTTTGTTCGCTGGATTATAACAGACGGTGTATTGGGAAGTCCTGAAGTAGTATCGGTAAATGGTGTTGGC
TATTGGGGATCTCCTGTGTCAAATACCAAGGTTGTCACCAAAGGAACTACTGCACAAAGCGATTATTTCTTATCCTATTA
TGATCCTAACGTACTTTATTGGGTGAATGGAACAAGTAATAATGCGTCCAAGTCTTTATCCAATTCGGACAATGGCAATT
CCTGGGCAATGAATAATAACTGTCTGGATGCAAGAACGTTCAATAATGCGCAGTATCTTGTATTGGTATCTACGGCTCAC
TTCCCGCAATGGGGAGGCACTCCGTACTTATATATGTACGATGTAACCTCAGACGGATCGTTTACCGGTACGGTATCTAC
TTCAGACGCTTTGACATTCAATCCTTCACTTTCTTCGTTCGGTTCTGCAGATGGTGTAGCGGCAACAGGTGATGTATTGT
TTGCTCCAACTACAGATGGATATAAACTTCGTCTCTACTATGTTGACAACAACTGTAAGATTATCGGAGGGTATGAATTT
GATTGTATCGACAAATAA

Upstream 100 bases:

>100_bases
ACTAAGATGTACCGTTTCCCTATGCCACAGGCGGAGTTGGACAATAACGGTGCGGTAACTCAATATGCAGAATGGCAATA
AATCTAAAATGAAAACAATT

Downstream 100 bases:

>100_bases
TTAATGTGTTTCAAAAGAGTTACTGACATTAATAAACATATATAATATGAGAAATCTTTTTAAAATATTATTATTGACGT
TTTGCGGAATGGTTGCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKKNIQYLLLGVLALMSSCQDPEYVLPTAERQGITSLTALFTSGPYVDKEAVVYTIADASVDKYVIPIPWFYPEDSENET
AEYMKTMRVQAKLAPNCTINPVLTILDLTKENYFTYTDAQGYKKQICITGERVKSNKCQLLSFSIPAEDISGIIDEEHKT
VSLISAEDLSSCLAEYSLSSHATMSPDPKTEALDFNSPVELTVIAHDGVTKQTYTVQKAVPDKIPYGYRKGSETELFKLD
MGVIGLPWTSANSPSLAVNGNNLVVCLGDGSTAPTYYNASTGSKIGNMTLGSVGVASLGCVTSDSKGNILLATKAANGKS
FSIYKTSSVTTVPTLLISYTNNTSLDMGTKVSVQGDINTNAAIIATCDGTASSGSNTFVRWIITDGVLGSPEVVSVNGVG
YWGSPVSNTKVVTKGTTAQSDYFLSYYDPNVLYWVNGTSNNASKSLSNSDNGNSWAMNNNCLDARTFNNAQYLVLVSTAH
FPQWGGTPYLYMYDVTSDGSFTGTVSTSDALTFNPSLSSFGSADGVAATGDVLFAPTTDGYKLRLYYVDNNCKIIGGYEF
DCIDK

Sequences:

>Translated_565_residues
MKKNIQYLLLGVLALMSSCQDPEYVLPTAERQGITSLTALFTSGPYVDKEAVVYTIADASVDKYVIPIPWFYPEDSENET
AEYMKTMRVQAKLAPNCTINPVLTILDLTKENYFTYTDAQGYKKQICITGERVKSNKCQLLSFSIPAEDISGIIDEEHKT
VSLISAEDLSSCLAEYSLSSHATMSPDPKTEALDFNSPVELTVIAHDGVTKQTYTVQKAVPDKIPYGYRKGSETELFKLD
MGVIGLPWTSANSPSLAVNGNNLVVCLGDGSTAPTYYNASTGSKIGNMTLGSVGVASLGCVTSDSKGNILLATKAANGKS
FSIYKTSSVTTVPTLLISYTNNTSLDMGTKVSVQGDINTNAAIIATCDGTASSGSNTFVRWIITDGVLGSPEVVSVNGVG
YWGSPVSNTKVVTKGTTAQSDYFLSYYDPNVLYWVNGTSNNASKSLSNSDNGNSWAMNNNCLDARTFNNAQYLVLVSTAH
FPQWGGTPYLYMYDVTSDGSFTGTVSTSDALTFNPSLSSFGSADGVAATGDVLFAPTTDGYKLRLYYVDNNCKIIGGYEF
DCIDK
>Mature_565_residues
MKKNIQYLLLGVLALMSSCQDPEYVLPTAERQGITSLTALFTSGPYVDKEAVVYTIADASVDKYVIPIPWFYPEDSENET
AEYMKTMRVQAKLAPNCTINPVLTILDLTKENYFTYTDAQGYKKQICITGERVKSNKCQLLSFSIPAEDISGIIDEEHKT
VSLISAEDLSSCLAEYSLSSHATMSPDPKTEALDFNSPVELTVIAHDGVTKQTYTVQKAVPDKIPYGYRKGSETELFKLD
MGVIGLPWTSANSPSLAVNGNNLVVCLGDGSTAPTYYNASTGSKIGNMTLGSVGVASLGCVTSDSKGNILLATKAANGKS
FSIYKTSSVTTVPTLLISYTNNTSLDMGTKVSVQGDINTNAAIIATCDGTASSGSNTFVRWIITDGVLGSPEVVSVNGVG
YWGSPVSNTKVVTKGTTAQSDYFLSYYDPNVLYWVNGTSNNASKSLSNSDNGNSWAMNNNCLDARTFNNAQYLVLVSTAH
FPQWGGTPYLYMYDVTSDGSFTGTVSTSDALTFNPSLSSFGSADGVAATGDVLFAPTTDGYKLRLYYVDNNCKIIGGYEF
DCIDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60697; Mature: 60697

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIQYLLLGVLALMSSCQDPEYVLPTAERQGITSLTALFTSGPYVDKEAVVYTIADAS
CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEHHHCCCCCCCCCEEEEEEECCC
VDKYVIPIPWFYPEDSENETAEYMKTMRVQAKLAPNCTINPVLTILDLTKENYFTYTDAQ
CCCEEEECCEECCCCCCCHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCEEEEECCC
GYKKQICITGERVKSNKCQLLSFSIPAEDISGIIDEEHKTVSLISAEDLSSCLAEYSLSS
CCEEEEEEECCCCCCCCEEEEEEECCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCC
HATMSPDPKTEALDFNSPVELTVIAHDGVTKQTYTVQKAVPDKIPYGYRKGSETELFKLD
CCCCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEE
MGVIGLPWTSANSPSLAVNGNNLVVCLGDGSTAPTYYNASTGSKIGNMTLGSVGVASLGC
CCEEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEECCCCCCCCCEEECCCCCEEEEE
VTSDSKGNILLATKAANGKSFSIYKTSSVTTVPTLLISYTNNTSLDMGTKVSVQGDINTN
EECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC
AAIIATCDGTASSGSNTFVRWIITDGVLGSPEVVSVNGVGYWGSPVSNTKVVTKGTTAQS
EEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCEECCCCCCCEEEEECCCCCC
DYFLSYYDPNVLYWVNGTSNNASKSLSNSDNGNSWAMNNNCLDARTFNNAQYLVLVSTAH
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEEEECC
FPQWGGTPYLYMYDVTSDGSFTGTVSTSDALTFNPSLSSFGSADGVAATGDVLFAPTTDG
CCCCCCCCEEEEEEECCCCCEEEEEECCCEEEECCCHHHCCCCCCCEECCCEEEEECCCC
YKLRLYYVDNNCKIIGGYEFDCIDK
EEEEEEEECCCEEEEECCEEEECCC
>Mature Secondary Structure
MKKNIQYLLLGVLALMSSCQDPEYVLPTAERQGITSLTALFTSGPYVDKEAVVYTIADAS
CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEHHHCCCCCCCCCEEEEEEECCC
VDKYVIPIPWFYPEDSENETAEYMKTMRVQAKLAPNCTINPVLTILDLTKENYFTYTDAQ
CCCEEEECCEECCCCCCCHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCEEEEECCC
GYKKQICITGERVKSNKCQLLSFSIPAEDISGIIDEEHKTVSLISAEDLSSCLAEYSLSS
CCEEEEEEECCCCCCCCEEEEEEECCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCC
HATMSPDPKTEALDFNSPVELTVIAHDGVTKQTYTVQKAVPDKIPYGYRKGSETELFKLD
CCCCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEE
MGVIGLPWTSANSPSLAVNGNNLVVCLGDGSTAPTYYNASTGSKIGNMTLGSVGVASLGC
CCEEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEECCCCCCCCCEEECCCCCEEEEE
VTSDSKGNILLATKAANGKSFSIYKTSSVTTVPTLLISYTNNTSLDMGTKVSVQGDINTN
EECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC
AAIIATCDGTASSGSNTFVRWIITDGVLGSPEVVSVNGVGYWGSPVSNTKVVTKGTTAQS
EEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCEECCCCCCCEEEEECCCCCC
DYFLSYYDPNVLYWVNGTSNNASKSLSNSDNGNSWAMNNNCLDARTFNNAQYLVLVSTAH
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEEEECC
FPQWGGTPYLYMYDVTSDGSFTGTVSTSDALTFNPSLSSFGSADGVAATGDVLFAPTTDG
CCCCCCCCEEEEEEECCCCCEEEEEECCCEEEECCCHHHCCCCCCCEECCCEEEEECCCC
YKLRLYYVDNNCKIIGGYEFDCIDK
EEEEEEEECCCEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA