| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345861
Identifier: 29345861
GI number: 29345861
Start: 550603
End: 552264
Strand: Reverse
Name: 29345861
Synonym: BT_0451
Alternate gene names: NA
Gene position: 552264-550603 (Counterclockwise)
Preceding gene: 29345862
Following gene: 29345860
Centisome position: 8.82
GC content: 43.26
Gene sequence:
>1662_bases ATGAAAACAAAATTTATAAGTATCATATTGTTGGGAGCCTCTTTAGGGCTTGGTTCATGTAGTGATTATCTAGACATGAC ACCGACGGACAAAGCATCAGATAAACTAGTATGGAGTAAACTGGAATATGCCGAACAAGCTGTCAACGATTTCTACCGTT ATATCGATTATTTAGGAGTTTATCGTGACGGACAATGCCTGGCAGGCATGACGGAAGCGTTGACAGACCAACTCAAATAC GGTTCCTATAACTATATGTCTAAATGCCAGATACCTAGCGAAATCGCTTATGGAGGATCCGTTCTGACAGTAAGTTATGT CAGCACTTATTTAGGCAATTGGGGGACGATGTATGAATATGTACGCCGTGTCAATGAAGGTCTCAATAAACTGAAAAAGT ACGCCTCATTCGGTCAGACGGAACAAGAACGGCTGGAAGCGGAAATGCGCTTCTTCAGAGGATATTTATATACCGACTTG GTAAAACGTTATAAGGAAGTCATTATATATGATGAAGATCTGGATAATATAAAGAAGGATATGCCGGTCAGTTCCGAAGC AGAAGGATGGAACTTTGTATATGAGGACCTGAAGTTTGCGGGCGAACATTTACCGGTTGATAAAACCCCTAATGGACGTC TGACTAGCGGAGCAGCTTATGCAATGCTGTCACGGGCAATGCTTTATGCAGAAAGATGGGATGATGCCCGGATCGCTGCC GAAGAAGTGATGGGCATGGGATATAAGCTGGAAGAAAAAGAGAATTATTCTAATGCATTTAAAGCAGGAAGTCAGGAAGC TATTCTGCAATATTGCTATGACAAGAGTTCTACTGTAACTCATGATTTTGACGGCTATATGGCTCCCGGAGGTGATAAAG CATTGGATGGTAATTCAATGACCGGAGGATTTGGAACTCCGACACAAGAAATGGTAGAATCTTATGAATATGCGGACGGT AGCGGTTTTCCGGATTGGAGTACCTGGCATACTGCAGAAGGAACAACGGCAACTCCTCCATACGATAAACTTGAACCACG CTTCAAAGCAACCATTCTTTATAATGGTGCGACGTGGAAAGGCAGAACGATCGCATCTTATGTCAATGGTACTGATGGTT GGGCTGCATGGAAAACGGATGCCAAACCAGAAGGACGTTCTACCACAGGTTATTATTTGCGTAAGCTGGTGGATGAGACT CATAGTTTCACTTCTGTGCAGGCAAGTACACAGCCATGGACCGAAATTCGTTATGCCGAAGTGTTACTAAATCATGCCGA GGCTTGCTATCATTTGAGTGGCTATGCCGATAAAGCCAATAAAGACATCAAAGACATTCGTAACAGAGTCGGCTTGCCTT ATTCGGACAAGAGTGGAGAAGACCTGATGAAAGCGATTCGTCAGGAACGTAAAGTCGAATTAGCTTATGAAGGACACTAT TATTGGGATATGCGTCGCTGGAAACTATCTGCAACGGCATTCACCGGTATCCGTCTTCATGGACTTAAGATAGAACAGAA TGCAAACGGTTCGTTCAATTACATTTATGTAGAGTGTGATGACAAAGATCGTAACTTCCCGACTAAGATGTACCGTTTCC CTATGCCACAGGCGGAGTTGGACAATAACGGTGCGGTAACTCAATATGCAGAATGGCAATAA
Upstream 100 bases:
>100_bases CGACCCCGAATCTCCGGGAGTGAATAACGGATATTATCCTCAACAACGCACAATCATGGGCGGTATAACTCTGACTTTCT AAACCTTTAAAAGATTTATT
Downstream 100 bases:
>100_bases ATCTAAAATGAAAACAATTATGAAAAAGAATATACAATATTTACTATTAGGAGTATTGGCATTAATGAGTTCCTGCCAAG ATCCGGAATATGTACTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGVYRDGQCLAGMTEALTDQLKY GSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEYVRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDL VKRYKEVIIYDEDLDNIKKDMPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSMTGGFGTPTQEMVESYEYADG SGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWKGRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDET HSFTSVQASTQPWTEIRYAEVLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAELDNNGAVTQYAEWQ
Sequences:
>Translated_553_residues MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGVYRDGQCLAGMTEALTDQLKY GSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEYVRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDL VKRYKEVIIYDEDLDNIKKDMPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSMTGGFGTPTQEMVESYEYADG SGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWKGRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDET HSFTSVQASTQPWTEIRYAEVLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAELDNNGAVTQYAEWQ >Mature_553_residues MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGVYRDGQCLAGMTEALTDQLKY GSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEYVRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDL VKRYKEVIIYDEDLDNIKKDMPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSMTGGFGTPTQEMVESYEYADG SGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWKGRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDET HSFTSVQASTQPWTEIRYAEVLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAELDNNGAVTQYAEWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63022; Mature: 63022
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGV CCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YRDGQCLAGMTEALTDQLKYGSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEY CCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCEEHHHHHHHHHCCCHHHHHH VRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDLVKRYKEVIIYDEDLDNIKKD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHC MPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSM HHHHCCCCEECCHHCHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCC TGGFGTPTQEMVESYEYADGSGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWK CCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCEEEEEEECCCCCC GRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDETHSFTSVQASTQPWTEIRYAE CCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHH VLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCEE YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAEL EEEEEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCC DNNGAVTQYAEWQ CCCCCCCCCCCCC >Mature Secondary Structure MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGV CCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YRDGQCLAGMTEALTDQLKYGSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEY CCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCEEHHHHHHHHHCCCHHHHHH VRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDLVKRYKEVIIYDEDLDNIKKD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHC MPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSM HHHHCCCCEECCHHCHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCC TGGFGTPTQEMVESYEYADGSGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWK CCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCEEEEEEECCCCCC GRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDETHSFTSVQASTQPWTEIRYAE CCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHH VLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCEE YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAEL EEEEEEEEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCC DNNGAVTQYAEWQ CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA