Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345861

Identifier: 29345861

GI number: 29345861

Start: 550603

End: 552264

Strand: Reverse

Name: 29345861

Synonym: BT_0451

Alternate gene names: NA

Gene position: 552264-550603 (Counterclockwise)

Preceding gene: 29345862

Following gene: 29345860

Centisome position: 8.82

GC content: 43.26

Gene sequence:

>1662_bases
ATGAAAACAAAATTTATAAGTATCATATTGTTGGGAGCCTCTTTAGGGCTTGGTTCATGTAGTGATTATCTAGACATGAC
ACCGACGGACAAAGCATCAGATAAACTAGTATGGAGTAAACTGGAATATGCCGAACAAGCTGTCAACGATTTCTACCGTT
ATATCGATTATTTAGGAGTTTATCGTGACGGACAATGCCTGGCAGGCATGACGGAAGCGTTGACAGACCAACTCAAATAC
GGTTCCTATAACTATATGTCTAAATGCCAGATACCTAGCGAAATCGCTTATGGAGGATCCGTTCTGACAGTAAGTTATGT
CAGCACTTATTTAGGCAATTGGGGGACGATGTATGAATATGTACGCCGTGTCAATGAAGGTCTCAATAAACTGAAAAAGT
ACGCCTCATTCGGTCAGACGGAACAAGAACGGCTGGAAGCGGAAATGCGCTTCTTCAGAGGATATTTATATACCGACTTG
GTAAAACGTTATAAGGAAGTCATTATATATGATGAAGATCTGGATAATATAAAGAAGGATATGCCGGTCAGTTCCGAAGC
AGAAGGATGGAACTTTGTATATGAGGACCTGAAGTTTGCGGGCGAACATTTACCGGTTGATAAAACCCCTAATGGACGTC
TGACTAGCGGAGCAGCTTATGCAATGCTGTCACGGGCAATGCTTTATGCAGAAAGATGGGATGATGCCCGGATCGCTGCC
GAAGAAGTGATGGGCATGGGATATAAGCTGGAAGAAAAAGAGAATTATTCTAATGCATTTAAAGCAGGAAGTCAGGAAGC
TATTCTGCAATATTGCTATGACAAGAGTTCTACTGTAACTCATGATTTTGACGGCTATATGGCTCCCGGAGGTGATAAAG
CATTGGATGGTAATTCAATGACCGGAGGATTTGGAACTCCGACACAAGAAATGGTAGAATCTTATGAATATGCGGACGGT
AGCGGTTTTCCGGATTGGAGTACCTGGCATACTGCAGAAGGAACAACGGCAACTCCTCCATACGATAAACTTGAACCACG
CTTCAAAGCAACCATTCTTTATAATGGTGCGACGTGGAAAGGCAGAACGATCGCATCTTATGTCAATGGTACTGATGGTT
GGGCTGCATGGAAAACGGATGCCAAACCAGAAGGACGTTCTACCACAGGTTATTATTTGCGTAAGCTGGTGGATGAGACT
CATAGTTTCACTTCTGTGCAGGCAAGTACACAGCCATGGACCGAAATTCGTTATGCCGAAGTGTTACTAAATCATGCCGA
GGCTTGCTATCATTTGAGTGGCTATGCCGATAAAGCCAATAAAGACATCAAAGACATTCGTAACAGAGTCGGCTTGCCTT
ATTCGGACAAGAGTGGAGAAGACCTGATGAAAGCGATTCGTCAGGAACGTAAAGTCGAATTAGCTTATGAAGGACACTAT
TATTGGGATATGCGTCGCTGGAAACTATCTGCAACGGCATTCACCGGTATCCGTCTTCATGGACTTAAGATAGAACAGAA
TGCAAACGGTTCGTTCAATTACATTTATGTAGAGTGTGATGACAAAGATCGTAACTTCCCGACTAAGATGTACCGTTTCC
CTATGCCACAGGCGGAGTTGGACAATAACGGTGCGGTAACTCAATATGCAGAATGGCAATAA

Upstream 100 bases:

>100_bases
CGACCCCGAATCTCCGGGAGTGAATAACGGATATTATCCTCAACAACGCACAATCATGGGCGGTATAACTCTGACTTTCT
AAACCTTTAAAAGATTTATT

Downstream 100 bases:

>100_bases
ATCTAAAATGAAAACAATTATGAAAAAGAATATACAATATTTACTATTAGGAGTATTGGCATTAATGAGTTCCTGCCAAG
ATCCGGAATATGTACTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGVYRDGQCLAGMTEALTDQLKY
GSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEYVRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDL
VKRYKEVIIYDEDLDNIKKDMPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA
EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSMTGGFGTPTQEMVESYEYADG
SGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWKGRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDET
HSFTSVQASTQPWTEIRYAEVLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY
YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAELDNNGAVTQYAEWQ

Sequences:

>Translated_553_residues
MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGVYRDGQCLAGMTEALTDQLKY
GSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEYVRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDL
VKRYKEVIIYDEDLDNIKKDMPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA
EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSMTGGFGTPTQEMVESYEYADG
SGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWKGRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDET
HSFTSVQASTQPWTEIRYAEVLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY
YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAELDNNGAVTQYAEWQ
>Mature_553_residues
MKTKFISIILLGASLGLGSCSDYLDMTPTDKASDKLVWSKLEYAEQAVNDFYRYIDYLGVYRDGQCLAGMTEALTDQLKY
GSYNYMSKCQIPSEIAYGGSVLTVSYVSTYLGNWGTMYEYVRRVNEGLNKLKKYASFGQTEQERLEAEMRFFRGYLYTDL
VKRYKEVIIYDEDLDNIKKDMPVSSEAEGWNFVYEDLKFAGEHLPVDKTPNGRLTSGAAYAMLSRAMLYAERWDDARIAA
EEVMGMGYKLEEKENYSNAFKAGSQEAILQYCYDKSSTVTHDFDGYMAPGGDKALDGNSMTGGFGTPTQEMVESYEYADG
SGFPDWSTWHTAEGTTATPPYDKLEPRFKATILYNGATWKGRTIASYVNGTDGWAAWKTDAKPEGRSTTGYYLRKLVDET
HSFTSVQASTQPWTEIRYAEVLLNHAEACYHLSGYADKANKDIKDIRNRVGLPYSDKSGEDLMKAIRQERKVELAYEGHY
YWDMRRWKLSATAFTGIRLHGLKIEQNANGSFNYIYVECDDKDRNFPTKMYRFPMPQAELDNNGAVTQYAEWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63022; Mature: 63022

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA