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The map label for this gene is araA

Identifier: 29345761

GI number: 29345761

Start: 423634

End: 425163

Strand: Reverse

Name: araA

Synonym: BT_0351

Alternate gene names: 29345761

Gene position: 425163-423634 (Counterclockwise)

Preceding gene: 29345762

Following gene: 29345760

Centisome position: 6.79

GC content: 46.01

Gene sequence:

>1530_bases
ATGAATAACGTATTTGATCAGTATGAAGTATGGTTCGTAACAGGAGCACAGCTCTTGTACGGAGGTGATGCAGTAATCGC
AGTAGACGCACACTCTAACGAAATGGTTAACGGTCTGAATGAATCGGGCAAACTTCCTGTTAAAGTAGTATACAAAGGAA
CGGCCAACTCTTCTAAAGAGGTGGAAGCTGTATTCAAAGCAGCCAACAACGATGACAAATGTGTAGGCGTCATCACTTGG
ATGCATACTTTCTCTCCTGCTAAAATGTGGATTCATGGTCTGCAACAATTAAAGAAACCATTGCTGCACCTGCATACTCA
ATTCAACAAGGAAATTCCTTGGGATACAATGGATATGGACTTTATGAATCTGAACCAGTCAGCTCACGGCGACCGCGAGT
TCGGACATATCTGTACCCGTATGCGCATCCGTCGCAAAGTAGTGGTAGGCTACTGGAAAGAAGAAGAAACATTGCATAAG
ATTGCTGTCTGGATGCGTGTTTGCGCAGGTTGGGCAGACTCTCAGGATATGCTGATCATCCGTTTCGGCGATCAGATGAA
TAATGTAGCCGTAACCGATGGTGACAAGGTAGAAGCAGAACAACGCATGGGCTATCATGTAGATTATTGCCCGGCAAGCG
AGCTGATGGAATATCACAAAGATATCAAAAATGCTGATGTAGATGCTTTGGTAGCTACTTACTTCAATGACTACGATCAT
GACGCTTCTCTGGAAGACAAATCAACCGAAGCTTATCAGAAAGTATGGAATGCTGCCAAAGCCGAGCTTGCTCTCCGTGC
TATCCTCAAAGCGAAAGGCGCCAAAGGATTCACTACCAACTTTGACGATCTGGGTCAGACTGACGGTAGCTATTTCGATC
AGATTCCGGGACTGGCTTCTCAACGCCTGATGGCAGAAGGCTACGGATTCGGTGCTGAAGGTGACTGGAAATCGGCTGCT
CTTTATCGTACTGTATGGGTAATGAATCAAGGACTTCCGAAAGGCTGTTCATTCCTCGAAGACTATACACTGAACTTTGA
TGGTGCCAACAGTTCTATCCTACAGTCACATATGTTGGAGATCTGTCCGCTTATCGCAGCTAACAAGCCTCGTCTGGAAG
TACACTTCCTCGGCATAGGTATCCGTAAGAGCCAGACTGCCCGTCTTGTGTTCACTTCAAAGACAGGAACAGGCTGCACC
GCAACTGTAGTGGATATGGGTAACCGTTTCCGTCTGATCGTAAACGATGTAGAATGTATCGAACCGAAACCACTTCCGAA
ATTGCCGGTTGCTTCCGCACTCTGGATTCCGATGCCTAACCTCGAAGTAGGCGCAGGCGCATGGATTCTGGCCGGTGGAA
CTCACCACTCTTGCTTCTCATACGACTTGACAGCAGAATACTGGGAAGATTATGCAGAAATCGCAGGCATCGAAATGGTA
CATATCAATAAAGATACGACTATCAGCTGCTTCAAGAAAGAACTGCGCATGAATGAAGTATATTATATGCTGAACAAAGC
GCTTTGCTAA

Upstream 100 bases:

>100_bases
AAACAACAAAAAACAATTAATAATAACCCGCAATTGCCATTTGACTTTCGACATTCTCTCATTGTCAATTGTCAATTGTC
AATTGTCAATTCAATAAATT

Downstream 100 bases:

>100_bases
AAACCAATCACTGAGTCCACTTAAAAAAATCGGTACCATCTCCATTGGTACCGACTTTTTAGTCACACACAATATGGATA
CTGGCGACTTTTAATTCAAC

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MNNVFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKEVEAVFKAANNDDKCVGVITW
MHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKEEETLHK
IAVWMRVCAGWADSQDMLIIRFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNDYDH
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLASQRLMAEGYGFGAEGDWKSAA
LYRTVWVMNQGLPKGCSFLEDYTLNFDGANSSILQSHMLEICPLIAANKPRLEVHFLGIGIRKSQTARLVFTSKTGTGCT
ATVVDMGNRFRLIVNDVECIEPKPLPKLPVASALWIPMPNLEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMV
HINKDTTISCFKKELRMNEVYYMLNKALC

Sequences:

>Translated_509_residues
MNNVFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKEVEAVFKAANNDDKCVGVITW
MHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKEEETLHK
IAVWMRVCAGWADSQDMLIIRFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNDYDH
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLASQRLMAEGYGFGAEGDWKSAA
LYRTVWVMNQGLPKGCSFLEDYTLNFDGANSSILQSHMLEICPLIAANKPRLEVHFLGIGIRKSQTARLVFTSKTGTGCT
ATVVDMGNRFRLIVNDVECIEPKPLPKLPVASALWIPMPNLEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMV
HINKDTTISCFKKELRMNEVYYMLNKALC
>Mature_509_residues
MNNVFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKEVEAVFKAANNDDKCVGVITW
MHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKEEETLHK
IAVWMRVCAGWADSQDMLIIRFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNDYDH
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLASQRLMAEGYGFGAEGDWKSAA
LYRTVWVMNQGLPKGCSFLEDYTLNFDGANSSILQSHMLEICPLIAANKPRLEVHFLGIGIRKSQTARLVFTSKTGTGCT
ATVVDMGNRFRLIVNDVECIEPKPLPKLPVASALWIPMPNLEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMV
HINKDTTISCFKKELRMNEVYYMLNKALC

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family

Homologues:

Organism=Escherichia coli, GI1786248, Length=506, Percent_Identity=47.0355731225296, Blast_Score=479, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARAA_BACTN (Q8AAW1)

Other databases:

- EMBL:   AE015928
- RefSeq:   NP_809264.1
- HSSP:   P08202
- ProteinModelPortal:   Q8AAW1
- SMR:   Q8AAW1
- GeneID:   1072405
- GenomeReviews:   AE015928_GR
- KEGG:   bth:BT_0351
- NMPDR:   fig|226186.1.peg.351
- HOGENOM:   HBG297198
- OMA:   EVCPTIA
- PhylomeDB:   Q8AAW1
- ProtClustDB:   PRK02929
- BioCyc:   BTHE226186:BT_0351-MONOMER
- BRENDA:   5.3.1.4
- GO:   GO:0005737
- HAMAP:   MF_00519
- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- PIRSF:   PIRSF001478
- ProDom:   PD018364

Pfam domain/function: PF02610 Arabinose_Isome; SSF50443 Fuc_isomerase_C; SSF53743 Fuc_isomerase_N

EC number: =5.3.1.4

Molecular weight: Translated: 57175; Mature: 57175

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKE
CCCCCCCEEEEEEECCEEEECCCEEEEEECCCCHHHHCCCCCCCCCEEEEEECCCCCCHH
VEAVFKAANNDDKCVGVITWMHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMD
HHHHHHHCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKEEETLHKIAVWMRVCAGWADSQDMLII
HHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEE
RFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNDYDH
EECCCCCCEEECCCCCCCHHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCCCHHH
QRLMAEGYGFGAEGDWKSAALYRTVWVMNQGLPKGCSFLEDYTLNFDGANSSILQSHMLE
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHH
ICPLIAANKPRLEVHFLGIGIRKSQTARLVFTSKTGTGCTATVVDMGNRFRLIVNDVECI
HHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECHHHC
EPKPLPKLPVASALWIPMPNLEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMV
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEE
HINKDTTISCFKKELRMNEVYYMLNKALC
EECCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNVFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKE
CCCCCCCEEEEEEECCEEEECCCEEEEEECCCCHHHHCCCCCCCCCEEEEEECCCCCCHH
VEAVFKAANNDDKCVGVITWMHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMD
HHHHHHHCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKEEETLHKIAVWMRVCAGWADSQDMLII
HHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEE
RFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNDYDH
EECCCCCCEEECCCCCCCHHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCCCHHH
QRLMAEGYGFGAEGDWKSAALYRTVWVMNQGLPKGCSFLEDYTLNFDGANSSILQSHMLE
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHH
ICPLIAANKPRLEVHFLGIGIRKSQTARLVFTSKTGTGCTATVVDMGNRFRLIVNDVECI
HHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECHHHC
EPKPLPKLPVASALWIPMPNLEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMV
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEE
HINKDTTISCFKKELRMNEVYYMLNKALC
EECCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928