Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345744

Identifier: 29345744

GI number: 29345744

Start: 398354

End: 398635

Strand: Reverse

Name: 29345744

Synonym: BT_0334

Alternate gene names: NA

Gene position: 398635-398354 (Counterclockwise)

Preceding gene: 29345752

Following gene: 29345743

Centisome position: 6.37

GC content: 41.49

Gene sequence:

>282_bases
ATGGAGCAAATAGACAACCTAAAAGAGCTTATCAATCAAGGGGATGTGGACATAGCAATCAAGCAACTGGACCAACTTCT
CCAAGACGATTCTGTCGAGAAAGATAAAGATATGCTCTACTATTTACGGGGAAATGCCTACCGAAAAAAAGGAGATTGGA
AGCAGGCGCTGGATAACTACCAGTATGCTATCGATCTTAATCCCGACAGCCCCGCTGTTCAAGCCAGAACAATGGCGATA
GATATCCTGAATTTCTACCACAAAGATATGTATAATCAATAA

Upstream 100 bases:

>100_bases
GCAATAAAAACAAAAGGAGGTAAATTTCCTTTCTCATTTTCCCCCATTTACATAAATAAAAACTATCTTTGCGATTCAGA
ATCCCGAAAGACGAAAGAAA

Downstream 100 bases:

>100_bases
CCGAATTCAAAGATAACGTAATAAAATAGAGATTATGGCAAAAATTAAAGGAGCAATCGTAGTCGACACGGAGCGTTGCA
AAGGATGCAACCTATGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MEQIDNLKELINQGDVDIAIKQLDQLLQDDSVEKDKDMLYYLRGNAYRKKGDWKQALDNYQYAIDLNPDSPAVQARTMAI
DILNFYHKDMYNQ

Sequences:

>Translated_93_residues
MEQIDNLKELINQGDVDIAIKQLDQLLQDDSVEKDKDMLYYLRGNAYRKKGDWKQALDNYQYAIDLNPDSPAVQARTMAI
DILNFYHKDMYNQ
>Mature_93_residues
MEQIDNLKELINQGDVDIAIKQLDQLLQDDSVEKDKDMLYYLRGNAYRKKGDWKQALDNYQYAIDLNPDSPAVQARTMAI
DILNFYHKDMYNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10959; Mature: 10959

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIDNLKELINQGDVDIAIKQLDQLLQDDSVEKDKDMLYYLRGNAYRKKGDWKQALDNY
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC
QYAIDLNPDSPAVQARTMAIDILNFYHKDMYNQ
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQIDNLKELINQGDVDIAIKQLDQLLQDDSVEKDKDMLYYLRGNAYRKKGDWKQALDNY
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC
QYAIDLNPDSPAVQARTMAIDILNFYHKDMYNQ
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA