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The map label for this gene is ydbK [C]

Identifier: 29345743

GI number: 29345743

Start: 398092

End: 398319

Strand: Reverse

Name: ydbK [C]

Synonym: BT_0333

Alternate gene names: 29345743

Gene position: 398319-398092 (Counterclockwise)

Preceding gene: 29345744

Following gene: 29345742

Centisome position: 6.36

GC content: 43.86

Gene sequence:

>228_bases
ATGGCAAAAATTAAAGGAGCAATCGTAGTCGACACGGAGCGTTGCAAAGGATGCAACCTATGTGTAGTAGCGTGTCCGCT
CGATGTAATCGCCCTCAACAAAGAGGTGAATATGAAAGGCTATAACTATGCCTGGCAAGTAAAAGAAGATACCTGCAACG
GATGCAGCTCGTGTGCAATGGTTTGTCCCGACGGATGTATCTCAGTGTATAAAGTAAAAGTAGAATAA

Upstream 100 bases:

>100_bases
GTTCAAGCCAGAACAATGGCGATAGATATCCTGAATTTCTACCACAAAGATATGTATAATCAATAACCGAATTCAAAGAT
AACGTAATAAAATAGAGATT

Downstream 100 bases:

>100_bases
AAGAAAAAGAATATGGCAGAAGAAGTTGTATTAATGAAAGGAAACGAAGCCATCGCCCACGCAGCTATCCGTTGCGGTGC
GGACGGATACTTCGGATATC

Product: hypothetical protein

Products: succinyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Ferredoxin; 2-Oxoglutarate Synthase Delta Subunit; 2-Ketoglutarate Ferredoxin Oxidoreductase Subunit Delta; Ferredoxin 4Fe-4S; Photosystem I Iron-Sulfur Protein PsaC; 2-OxoacidFerredoxin Oxidoreductase Ferredoxin Subunit

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MAKIKGAIVVDTERCKGCNLCVVACPLDVIALNKEVNMKGYNYAWQVKEDTCNGCSSCAMVCPDGCISVYKVKVE

Sequences:

>Translated_75_residues
MAKIKGAIVVDTERCKGCNLCVVACPLDVIALNKEVNMKGYNYAWQVKEDTCNGCSSCAMVCPDGCISVYKVKVE
>Mature_74_residues
AKIKGAIVVDTERCKGCNLCVVACPLDVIALNKEVNMKGYNYAWQVKEDTCNGCSSCAMVCPDGCISVYKVKVE

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.7.3

Molecular weight: Translated: 8125; Mature: 7993

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
16.0 %Cys+Met (Translated Protein)
12.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
14.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKGAIVVDTERCKGCNLCVVACPLDVIALNKEVNMKGYNYAWQVKEDTCNGCSSCAM
CCCCCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEE
VCPDGCISVYKVKVE
ECCCCCEEEEEEEEC
>Mature Secondary Structure 
AKIKGAIVVDTERCKGCNLCVVACPLDVIALNKEVNMKGYNYAWQVKEDTCNGCSSCAM
CCCCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEE
VCPDGCISVYKVKVE
ECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-oxoglutarate; CoA; oxidized ferredoxin

Specific reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA