Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345752

Identifier: 29345752

GI number: 29345752

Start: 411093

End: 411866

Strand: Reverse

Name: 29345752

Synonym: BT_0342

Alternate gene names: NA

Gene position: 411866-411093 (Counterclockwise)

Preceding gene: 29345753

Following gene: 29345744

Centisome position: 6.58

GC content: 43.8

Gene sequence:

>774_bases
ATGATTGAGCAAGAACTCACTTATCAAGACTTACGAATCCCATCGTCCGAAATTTATGAAGCAATGGGATACAAAGATTC
TATACCGGATCAGATGGTAATAGATGAGACTAATACGTTGCTAAAACGGGTTATTCCCCTGCTTCGCCCTCGGTTCGCAT
TCTTCTTTATGGAAGGTACACTTGATATCGAAAAAGAGACTCTTAGCGTACAAAGCATCCATCCACCCACTGTCAATCCT
ATACAAGACACCATTCCCACACGGAGCCCTGAGCAAAACACTTTTTCTACACAAAGTAAAAGTACCGTTTTCTCTGTTGG
TAAAACCATCGCCCGTCAATTAAGAGGATCGGAAGCGTTTGTCTTTTTTGCAGCTACTGCCGGAACTGAGTTTGAGGTAT
TCCAGCATACGTTGCAACAAGAAGAAGATATGGTCAAAATATACATAGCAGACTCGTTAGGGAGTATTATTGCAGAAAAG
ACGGCTGATTGCATGGAAGTCGCTTTGGCTGAATATATACGGGAGAAGAACTGGAAACATACCAACCGATACAGCCCAGG
ATACTGTGGATGGCACGTTTCGGAACAACAAAAACTGTTCCCATTGTTCCCCATAGCTGCTCCCTGTGGCATCCGGTTGA
CAGATTCCAGCCTCATGGTACCCATCAAATCAGTTAGTGGCGTCATCGGAACGGGCACTAATGTCCGCAAGCTTGAATAC
ACTTGTGGACTGTGCACTTACGAAAACTGTTATCGCAAAAGAAAACACAGATAA

Upstream 100 bases:

>100_bases
CCATATACGCCATTAGCTAATATAAATGCTTTTTATACAGCATTGGAAGAGTTCAATGAAACTCGAAATTAGGCTGTCAT
TCAGATAATGTCAATTAATA

Downstream 100 bases:

>100_bases
ATTTGTGATCGGGGGCTTACTAAAAGTCGGTAGTACCACCATTCTCCTCCTTCGGGAAGGAGTGGTCGAAGACCGAGGTG
GTAGGTGAAGAAATAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Cobalamin Synthesis Protein CobW

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MIEQELTYQDLRIPSSEIYEAMGYKDSIPDQMVIDETNTLLKRVIPLLRPRFAFFFMEGTLDIEKETLSVQSIHPPTVNP
IQDTIPTRSPEQNTFSTQSKSTVFSVGKTIARQLRGSEAFVFFAATAGTEFEVFQHTLQQEEDMVKIYIADSLGSIIAEK
TADCMEVALAEYIREKNWKHTNRYSPGYCGWHVSEQQKLFPLFPIAAPCGIRLTDSSLMVPIKSVSGVIGTGTNVRKLEY
TCGLCTYENCYRKRKHR

Sequences:

>Translated_257_residues
MIEQELTYQDLRIPSSEIYEAMGYKDSIPDQMVIDETNTLLKRVIPLLRPRFAFFFMEGTLDIEKETLSVQSIHPPTVNP
IQDTIPTRSPEQNTFSTQSKSTVFSVGKTIARQLRGSEAFVFFAATAGTEFEVFQHTLQQEEDMVKIYIADSLGSIIAEK
TADCMEVALAEYIREKNWKHTNRYSPGYCGWHVSEQQKLFPLFPIAAPCGIRLTDSSLMVPIKSVSGVIGTGTNVRKLEY
TCGLCTYENCYRKRKHR
>Mature_257_residues
MIEQELTYQDLRIPSSEIYEAMGYKDSIPDQMVIDETNTLLKRVIPLLRPRFAFFFMEGTLDIEKETLSVQSIHPPTVNP
IQDTIPTRSPEQNTFSTQSKSTVFSVGKTIARQLRGSEAFVFFAATAGTEFEVFQHTLQQEEDMVKIYIADSLGSIIAEK
TADCMEVALAEYIREKNWKHTNRYSPGYCGWHVSEQQKLFPLFPIAAPCGIRLTDSSLMVPIKSVSGVIGTGTNVRKLEY
TCGLCTYENCYRKRKHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29229; Mature: 29229

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQELTYQDLRIPSSEIYEAMGYKDSIPDQMVIDETNTLLKRVIPLLRPRFAFFFMEGT
CCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCHHHEEEEEECC
LDIEKETLSVQSIHPPTVNPIQDTIPTRSPEQNTFSTQSKSTVFSVGKTIARQLRGSEAF
EEECHHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
VFFAATAGTEFEVFQHTLQQEEDMVKIYIADSLGSIIAEKTADCMEVALAEYIREKNWKH
EEEEECCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TNRYSPGYCGWHVSEQQKLFPLFPIAAPCGIRLTDSSLMVPIKSVSGVIGTGTNVRKLEY
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCEEEEHHHHCCEECCCCCCEEEEE
TCGLCTYENCYRKRKHR
EECCCCHHHHHHHHCCC
>Mature Secondary Structure
MIEQELTYQDLRIPSSEIYEAMGYKDSIPDQMVIDETNTLLKRVIPLLRPRFAFFFMEGT
CCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCHHHEEEEEECC
LDIEKETLSVQSIHPPTVNPIQDTIPTRSPEQNTFSTQSKSTVFSVGKTIARQLRGSEAF
EEECHHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
VFFAATAGTEFEVFQHTLQQEEDMVKIYIADSLGSIIAEKTADCMEVALAEYIREKNWKH
EEEEECCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TNRYSPGYCGWHVSEQQKLFPLFPIAAPCGIRLTDSSLMVPIKSVSGVIGTGTNVRKLEY
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCEEEEHHHHCCEECCCCCCEEEEE
TCGLCTYENCYRKRKHR
EECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA