| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345641
Identifier: 29345641
GI number: 29345641
Start: 252110
End: 252481
Strand: Reverse
Name: 29345641
Synonym: BT_0231
Alternate gene names: NA
Gene position: 252481-252110 (Counterclockwise)
Preceding gene: 29345642
Following gene: 29345640
Centisome position: 4.03
GC content: 48.92
Gene sequence:
>372_bases ATGAATAAGGAATTAACTTTCAACGACCTTCCAATGGTCGTTGCCCAGCTTCGGGACGAAGTGGTGGGCATGAAGCAGAT GATCGTCAGTCTGCAATCACAGAACAAGCCACACAAGGCTAATACGCACATACCTATGAGTGTGGAGGAAGCATCGGCAT ACCTGAAAATGCCGATGGCAACTCTCTACATGAAACTTGGTAACGGCAGCATTCCTGCCACCAAGCCAGGCAAACGTTAC TGCCTCTATCAGGATGAACTTGACAAGTGGCTGGAGACTAACCGCAAGAATCCTGTACCTCTTACGGCAGAGGAAGAGAA CGCAGCCATTCTTGCAGGAAACAAGCGCAAGCCGAAACCCTTAAACTGGTAA
Upstream 100 bases:
>100_bases GTTAGAGTTAATCCTTCGTGAATGACAAATGACTGTCACGAACCTCAGTAACGGAAGCATCATTCTGTTCCTTTGCACCA GTTATTAACAAAGTATCAGA
Downstream 100 bases:
>100_bases TGTCATGGATGCGCTTGAACTCTGTAATAAAATCAACATGGAAGCCGAGTCTTTAGCGGACTCAGGCTTCCCTCTTGAGG TATTTCCACAAAAAATGCAG
Product: excisionase
Products: NA
Alternate protein names: Mobilizable Transposon Xis Protein; Excisionase In Mobilizable Transposon; Excisionase In Mobilizable Transposon Xis Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNKELTFNDLPMVVAQLRDEVVGMKQMIVSLQSQNKPHKANTHIPMSVEEASAYLKMPMATLYMKLGNGSIPATKPGKRY CLYQDELDKWLETNRKNPVPLTAEEENAAILAGNKRKPKPLNW
Sequences:
>Translated_123_residues MNKELTFNDLPMVVAQLRDEVVGMKQMIVSLQSQNKPHKANTHIPMSVEEASAYLKMPMATLYMKLGNGSIPATKPGKRY CLYQDELDKWLETNRKNPVPLTAEEENAAILAGNKRKPKPLNW >Mature_123_residues MNKELTFNDLPMVVAQLRDEVVGMKQMIVSLQSQNKPHKANTHIPMSVEEASAYLKMPMATLYMKLGNGSIPATKPGKRY CLYQDELDKWLETNRKNPVPLTAEEENAAILAGNKRKPKPLNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13939; Mature: 13939
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKELTFNDLPMVVAQLRDEVVGMKQMIVSLQSQNKPHKANTHIPMSVEEASAYLKMPMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH TLYMKLGNGSIPATKPGKRYCLYQDELDKWLETNRKNPVPLTAEEENAAILAGNKRKPKP HHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC LNW CCC >Mature Secondary Structure MNKELTFNDLPMVVAQLRDEVVGMKQMIVSLQSQNKPHKANTHIPMSVEEASAYLKMPMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH TLYMKLGNGSIPATKPGKRYCLYQDELDKWLETNRKNPVPLTAEEENAAILAGNKRKPKP HHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC LNW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA