Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345640

Identifier: 29345640

GI number: 29345640

Start: 250714

End: 252072

Strand: Reverse

Name: 29345640

Synonym: BT_0230

Alternate gene names: NA

Gene position: 252072-250714 (Counterclockwise)

Preceding gene: 29345641

Following gene: 29345639

Centisome position: 4.03

GC content: 44.67

Gene sequence:

>1359_bases
ATGGAAGCCGAGTCTTTAGCGGACTCAGGCTTCCCTCTTGAGGTATTTCCACAAAAAATGCAGTCCATCATCATAGACAT
GGTGGTGCACGGCAATTTCAAGGTGGATTATGTCGCCATGTCCATGCTGTCGGCAGCATCAGCGGCTCTTGGCAATACCT
ATCGTATTCACGTTAAGCAGGATTGGGACACGAATGCCGCTCTTTATATCATATTGGTTGGCAGACCTGGCATGGGCAAA
ACTCCACCATTACAGCTTGCATACAAGCCAATTCGGGAGTATGAACGAAAGCTGTTTGACAAGTTTTGCCATGAACTTGA
CCTGTATGAGGCAGCATGTGCAACAAAGGAAAGCGGAAGCAAGGAAATGAAGAAGCCTATTCTGAAAAGGGTCACATTGG
ATGACTTTACATTGGAGGCTCTGGTATTGGAGCATTACAACAACTTGCGTGGCATAGCCATCAACTATGATGAAATTCTC
GGACTGCTTGCCAATACAGACAGGTATGGGAAAAATCCCATGCTTGAACGCCTACTTTCCATCTGGAGCGGATGCCACTT
GGAGAATACACGTGTCAAGAATGACCGCCCACAACGTGTAGAAGAGCCATGTGTCAACATCATCGGTACAACACAGACCA
AACGAATGAAGGAACTGATGGCTTCCAAATTCATGGATACAGGTTTTCTTGACCGTATTCTGGTTGTATATCCCAAATCC
AAGAAAGTTCCACACTGGCTGGATGAGGAAGACAGCCATGTGCGCCAGAGCGAGGCTTCAAGAAAATGGGCTGACATCAT
CGGGAAAATCTTTGGACTTGACTATGCAAGGTGTAATGACACAAATGAATGTTGTCCAAATATCCTTTATATGGACAAGG
ATGCACATTCCCTTTTCTTTGGTTGGTGGAACAGAAATGTGGATGCCATCAATGCCATAGAGGACGATGAAGATGTTGAA
ACGAGGGTGATGAAGCACAATACCCACGTCGCACGCATTGCCTTATTGCTCCAAGCTCTAAGATACGCCTGTGGCGAGAG
CCATCTGCAAAGTATTGATGTGGATTCCATAGAAGGAGCATTACGACTCAATGAATACTGTGAGAATTGCTATCAACGCT
GCCGAGCCTTTGTTGCTGAAGACACCTGTGATTCTATGTCCAAGGAGTTGCTGTATCTGTTGGAAGACAGTTTTGACACA
AAAACAGCCATAAAAACAGGAATGGAGAATCTGCATGTTACAGACCGTACTGTGATGAACTATATAAAGGAGCTTATGAA
GTCTGGACTAATCACAAAGGCAAAGAAAGGATTTTACGAAAAAGTAAAGTTCGAAACAGGACAGGCTACTGAAACATAA

Upstream 100 bases:

>100_bases
GAGGAAGAGAACGCAGCCATTCTTGCAGGAAACAAGCGCAAGCCGAAACCCTTAAACTGGTAATGTCATGGATGCGCTTG
AACTCTGTAATAAAATCAAC

Downstream 100 bases:

>100_bases
ATCAACCTGTTTTCAGTATTCATTTGTTTCAGTTTTTCAGTTGACAAGTGCGTAACTGAAAACATGAAAGAACTGAAAGC
TGAAATTCACAAATAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MEAESLADSGFPLEVFPQKMQSIIIDMVVHGNFKVDYVAMSMLSAASAALGNTYRIHVKQDWDTNAALYIILVGRPGMGK
TPPLQLAYKPIREYERKLFDKFCHELDLYEAACATKESGSKEMKKPILKRVTLDDFTLEALVLEHYNNLRGIAINYDEIL
GLLANTDRYGKNPMLERLLSIWSGCHLENTRVKNDRPQRVEEPCVNIIGTTQTKRMKELMASKFMDTGFLDRILVVYPKS
KKVPHWLDEEDSHVRQSEASRKWADIIGKIFGLDYARCNDTNECCPNILYMDKDAHSLFFGWWNRNVDAINAIEDDEDVE
TRVMKHNTHVARIALLLQALRYACGESHLQSIDVDSIEGALRLNEYCENCYQRCRAFVAEDTCDSMSKELLYLLEDSFDT
KTAIKTGMENLHVTDRTVMNYIKELMKSGLITKAKKGFYEKVKFETGQATET

Sequences:

>Translated_452_residues
MEAESLADSGFPLEVFPQKMQSIIIDMVVHGNFKVDYVAMSMLSAASAALGNTYRIHVKQDWDTNAALYIILVGRPGMGK
TPPLQLAYKPIREYERKLFDKFCHELDLYEAACATKESGSKEMKKPILKRVTLDDFTLEALVLEHYNNLRGIAINYDEIL
GLLANTDRYGKNPMLERLLSIWSGCHLENTRVKNDRPQRVEEPCVNIIGTTQTKRMKELMASKFMDTGFLDRILVVYPKS
KKVPHWLDEEDSHVRQSEASRKWADIIGKIFGLDYARCNDTNECCPNILYMDKDAHSLFFGWWNRNVDAINAIEDDEDVE
TRVMKHNTHVARIALLLQALRYACGESHLQSIDVDSIEGALRLNEYCENCYQRCRAFVAEDTCDSMSKELLYLLEDSFDT
KTAIKTGMENLHVTDRTVMNYIKELMKSGLITKAKKGFYEKVKFETGQATET
>Mature_452_residues
MEAESLADSGFPLEVFPQKMQSIIIDMVVHGNFKVDYVAMSMLSAASAALGNTYRIHVKQDWDTNAALYIILVGRPGMGK
TPPLQLAYKPIREYERKLFDKFCHELDLYEAACATKESGSKEMKKPILKRVTLDDFTLEALVLEHYNNLRGIAINYDEIL
GLLANTDRYGKNPMLERLLSIWSGCHLENTRVKNDRPQRVEEPCVNIIGTTQTKRMKELMASKFMDTGFLDRILVVYPKS
KKVPHWLDEEDSHVRQSEASRKWADIIGKIFGLDYARCNDTNECCPNILYMDKDAHSLFFGWWNRNVDAINAIEDDEDVE
TRVMKHNTHVARIALLLQALRYACGESHLQSIDVDSIEGALRLNEYCENCYQRCRAFVAEDTCDSMSKELLYLLEDSFDT
KTAIKTGMENLHVTDRTVMNYIKELMKSGLITKAKKGFYEKVKFETGQATET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51771; Mature: 51771

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAESLADSGFPLEVFPQKMQSIIIDMVVHGNFKVDYVAMSMLSAASAALGNTYRIHVKQ
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEE
DWDTNAALYIILVGRPGMGKTPPLQLAYKPIREYERKLFDKFCHELDLYEAACATKESGS
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KEMKKPILKRVTLDDFTLEALVLEHYNNLRGIAINYDEILGLLANTDRYGKNPMLERLLS
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHH
IWSGCHLENTRVKNDRPQRVEEPCVNIIGTTQTKRMKELMASKFMDTGFLDRILVVYPKS
HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCC
KKVPHWLDEEDSHVRQSEASRKWADIIGKIFGLDYARCNDTNECCPNILYMDKDAHSLFF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCEEEE
GWWNRNVDAINAIEDDEDVETRVMKHNTHVARIALLLQALRYACGESHLQSIDVDSIEGA
EECCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHH
LRLNEYCENCYQRCRAFVAEDTCDSMSKELLYLLEDSFDTKTAIKTGMENLHVTDRTVMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHCCCHHHHHHH
YIKELMKSGLITKAKKGFYEKVKFETGQATET
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEAESLADSGFPLEVFPQKMQSIIIDMVVHGNFKVDYVAMSMLSAASAALGNTYRIHVKQ
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEE
DWDTNAALYIILVGRPGMGKTPPLQLAYKPIREYERKLFDKFCHELDLYEAACATKESGS
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KEMKKPILKRVTLDDFTLEALVLEHYNNLRGIAINYDEILGLLANTDRYGKNPMLERLLS
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHH
IWSGCHLENTRVKNDRPQRVEEPCVNIIGTTQTKRMKELMASKFMDTGFLDRILVVYPKS
HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCC
KKVPHWLDEEDSHVRQSEASRKWADIIGKIFGLDYARCNDTNECCPNILYMDKDAHSLFF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCEEEE
GWWNRNVDAINAIEDDEDVETRVMKHNTHVARIALLLQALRYACGESHLQSIDVDSIEGA
EECCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHH
LRLNEYCENCYQRCRAFVAEDTCDSMSKELLYLLEDSFDTKTAIKTGMENLHVTDRTVMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHCCCHHHHHHH
YIKELMKSGLITKAKKGFYEKVKFETGQATET
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA