| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345639
Identifier: 29345639
GI number: 29345639
Start: 249577
End: 250602
Strand: Reverse
Name: 29345639
Synonym: BT_0229
Alternate gene names: NA
Gene position: 250602-249577 (Counterclockwise)
Preceding gene: 29345640
Following gene: 29345638
Centisome position: 4.0
GC content: 45.03
Gene sequence:
>1026_bases ATGATGAACGAGTATAGATTTCACTTGGAGAAATACAGATTGGGCAATCGTTACACATGCCCGAATTGTGAGCGCAAGCG TTGTTTCACAAGATACATAGATGATGAGGGGGAAGTGTCCTTCCCTGACAATGTAGGCAAATGCGACCATGAGCATAGTT GTGGGTATCACTATACTCCTAAAGACTATTTCCGTGAGCATCCAGACTTTCTATCTAAGGACAAATTGCCTTATCCGACA AGAGGGAATACCCAACCGAAAGTCGTAGAAAAGCCTATTTCCTATATCGCCAACGCTATTATGGAGCGTTCCTTGTCTCA TTACGGAATCAATCCGTTATACCAGTACCTTTCCAAGGTCTTTGGTGAACAAGAGACAGAAAGGCTGATGAAGATGTATC ATGTCGGAACATCCTATAAGTGGGGAGGCTCAACCATTTATTGGCAAGTTGACAAGGATGATAAGGTGAGGACTGGCAAG GTCATGCTGTATAATCCCAAAGACGGACATCGTGTGAAAGAGCCACGTTCTTATGTTGGATGGGCGCATGCTTTTCTTCA TCTTCCAGATTTCAACTTGTGCCAATGTTTCTTTGGTGAGCATTTGCTGGCACAGCATCCCACAATGTCGGTCGCTATTG TCGAGAGTGAAAAAACTGCCATAATCGCATCCCATTTCATCCCCAATTTCATCTGGCTGGCAACTGGAGGTATGCATGGC TGTCTCAACCAAATCGCTGTCAAGGTGTTGGGAGGTCGGGACATCATTCTATTCCCTGACCTTGGAGCAACGGACAAATG GAAATCAAAAATTCCATTGCTGCAATCTGTTTGCAAAAGGGTTGTCATAAGCAACATCTTGGAAGACAATGCCACCGATG AACAAAAGACCAAAGGTCTTGACATTGCTGACTTCCTACTGATGGCGGAAACACCGCAGATGGCGCTACAAAGGCTGATA AAGCAACATCCGCCACTCAAACATCTGATAGACTGTCTTGGGTTGGTGTTGGTGGAAGAGTCATAG
Upstream 100 bases:
>100_bases TTCAGTATTCATTTGTTTCAGTTTTTCAGTTGACAAGTGCGTAACTGAAAACATGAAAGAACTGAAAGCTGAAATTCACA AATAATTCATTTCAGTTACG
Downstream 100 bases:
>100_bases CAGAGTTGGTAAGGATCTGCGAGCACGCTTGCGTGACGGACTTTCAAAAAAGTCCTAAACATAATAGGGACTTTTAGATT CACATGCTTGCGATGTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MMNEYRFHLEKYRLGNRYTCPNCERKRCFTRYIDDEGEVSFPDNVGKCDHEHSCGYHYTPKDYFREHPDFLSKDKLPYPT RGNTQPKVVEKPISYIANAIMERSLSHYGINPLYQYLSKVFGEQETERLMKMYHVGTSYKWGGSTIYWQVDKDDKVRTGK VMLYNPKDGHRVKEPRSYVGWAHAFLHLPDFNLCQCFFGEHLLAQHPTMSVAIVESEKTAIIASHFIPNFIWLATGGMHG CLNQIAVKVLGGRDIILFPDLGATDKWKSKIPLLQSVCKRVVISNILEDNATDEQKTKGLDIADFLLMAETPQMALQRLI KQHPPLKHLIDCLGLVLVEES
Sequences:
>Translated_341_residues MMNEYRFHLEKYRLGNRYTCPNCERKRCFTRYIDDEGEVSFPDNVGKCDHEHSCGYHYTPKDYFREHPDFLSKDKLPYPT RGNTQPKVVEKPISYIANAIMERSLSHYGINPLYQYLSKVFGEQETERLMKMYHVGTSYKWGGSTIYWQVDKDDKVRTGK VMLYNPKDGHRVKEPRSYVGWAHAFLHLPDFNLCQCFFGEHLLAQHPTMSVAIVESEKTAIIASHFIPNFIWLATGGMHG CLNQIAVKVLGGRDIILFPDLGATDKWKSKIPLLQSVCKRVVISNILEDNATDEQKTKGLDIADFLLMAETPQMALQRLI KQHPPLKHLIDCLGLVLVEES >Mature_341_residues MMNEYRFHLEKYRLGNRYTCPNCERKRCFTRYIDDEGEVSFPDNVGKCDHEHSCGYHYTPKDYFREHPDFLSKDKLPYPT RGNTQPKVVEKPISYIANAIMERSLSHYGINPLYQYLSKVFGEQETERLMKMYHVGTSYKWGGSTIYWQVDKDDKVRTGK VMLYNPKDGHRVKEPRSYVGWAHAFLHLPDFNLCQCFFGEHLLAQHPTMSVAIVESEKTAIIASHFIPNFIWLATGGMHG CLNQIAVKVLGGRDIILFPDLGATDKWKSKIPLLQSVCKRVVISNILEDNATDEQKTKGLDIADFLLMAETPQMALQRLI KQHPPLKHLIDCLGLVLVEES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39319; Mature: 39319
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNEYRFHLEKYRLGNRYTCPNCERKRCFTRYIDDEGEVSFPDNVGKCDHEHSCGYHYTP CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC KDYFREHPDFLSKDKLPYPTRGNTQPKVVEKPISYIANAIMERSLSHYGINPLYQYLSKV HHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FGEQETERLMKMYHVGTSYKWGGSTIYWQVDKDDKVRTGKVMLYNPKDGHRVKEPRSYVG HCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEECEEEEECCCCCCCCCCCHHHHH WAHAFLHLPDFNLCQCFFGEHLLAQHPTMSVAIVESEKTAIIASHFIPNFIWLATGGMHG HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEHHHHHHHHEEEECCCCHHH CLNQIAVKVLGGRDIILFPDLGATDKWKSKIPLLQSVCKRVVISNILEDNATDEQKTKGL HHHHHHHHHCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCC DIADFLLMAETPQMALQRLIKQHPPLKHLIDCLGLVLVEES CHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHEECCC >Mature Secondary Structure MMNEYRFHLEKYRLGNRYTCPNCERKRCFTRYIDDEGEVSFPDNVGKCDHEHSCGYHYTP CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC KDYFREHPDFLSKDKLPYPTRGNTQPKVVEKPISYIANAIMERSLSHYGINPLYQYLSKV HHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FGEQETERLMKMYHVGTSYKWGGSTIYWQVDKDDKVRTGKVMLYNPKDGHRVKEPRSYVG HCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEECEEEEECCCCCCCCCCCHHHHH WAHAFLHLPDFNLCQCFFGEHLLAQHPTMSVAIVESEKTAIIASHFIPNFIWLATGGMHG HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEHHHHHHHHEEEECCCCHHH CLNQIAVKVLGGRDIILFPDLGATDKWKSKIPLLQSVCKRVVISNILEDNATDEQKTKGL HHHHHHHHHCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCC DIADFLLMAETPQMALQRLIKQHPPLKHLIDCLGLVLVEES CHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA