| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345580
Identifier: 29345580
GI number: 29345580
Start: 178582
End: 178935
Strand: Reverse
Name: 29345580
Synonym: BT_0170
Alternate gene names: NA
Gene position: 178935-178582 (Counterclockwise)
Preceding gene: 29345581
Following gene: 29345579
Centisome position: 2.86
GC content: 37.01
Gene sequence:
>354_bases ATGCTACTGACATTTTTAAACATACTGGCCACCATCATTGGCGTAATCAGTTTATTGATTGTAACCTATGGAGTATTCGT AGGATTCATAGCTTTTCTCCGTAACGAATTCAAACGGATCAACGGAACCTATACCATCAATAATGTCCGGCAGCTGAGAG CTGATTTCGGCAGTTACCTCTTATTGGGATTAGAATTTCTAATTGCATCAGACATACTAAAGACCGTAGTAGACCCGACT TTAGACGAACTGGCTATTTTAGGAGGTGTAGTTATAGTAAGAACTGTATTATCAGTCTTTCTGAATAAAGAAATAAAAGA ACTAGCCGAAGAAGAAAATTCAAAAAGCACATAA
Upstream 100 bases:
>100_bases GTCTTGACTATTACAACTAATTATCCGTTTTCTACATCACAATACAAAACTTTTATACAGGATAACTTGTTATTACAATA TAACCAAACATCATGAAACG
Downstream 100 bases:
>100_bases ATAGATTGGAATAAATAAAAAATGTATTACTTTTGCATGAATTCTTAATGACCTATGGTATGGAATATATCAATGAATTT CACAATGACTGAAATTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MLLTFLNILATIIGVISLLIVTYGVFVGFIAFLRNEFKRINGTYTINNVRQLRADFGSYLLLGLEFLIASDILKTVVDPT LDELAILGGVVIVRTVLSVFLNKEIKELAEEENSKST
Sequences:
>Translated_117_residues MLLTFLNILATIIGVISLLIVTYGVFVGFIAFLRNEFKRINGTYTINNVRQLRADFGSYLLLGLEFLIASDILKTVVDPT LDELAILGGVVIVRTVLSVFLNKEIKELAEEENSKST >Mature_117_residues MLLTFLNILATIIGVISLLIVTYGVFVGFIAFLRNEFKRINGTYTINNVRQLRADFGSYLLLGLEFLIASDILKTVVDPT LDELAILGGVVIVRTVLSVFLNKEIKELAEEENSKST
Specific function: Unknown
COG id: COG4828
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12995; Mature: 12995
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTFLNILATIIGVISLLIVTYGVFVGFIAFLRNEFKRINGTYTINNVRQLRADFGSYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLGLEFLIASDILKTVVDPTLDELAILGGVVIVRTVLSVFLNKEIKELAEEENSKST HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLLTFLNILATIIGVISLLIVTYGVFVGFIAFLRNEFKRINGTYTINNVRQLRADFGSYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLGLEFLIASDILKTVVDPTLDELAILGGVVIVRTVLSVFLNKEIKELAEEENSKST HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA